CI01000009_01208525_01212914


Basic Information

Item Value
gene id CI01000009_01208525_01212914
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 1208374 ~ 1214517 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_01208525_01212914.mRNA
AGTTAGGTCGGAGTCTGTAGTTACATTCGACCCTGTTCCCCTCTCTCCTCTACCTCTGTTTCCTGTGTACTCTTGCACTGTCCTACAAAATAAAGCCAAAAATGCCAAAAAATAAAAGAACTTAAAGGGTTAGTTCACCTAAAAGTGAAAATTCTGTCATTAATTACACACCCTCATGTTGTTCCACACCCGTAAGACCTTCGTTCATCTTCGGAACACAAATTAAGATATTTTTGATAAAATCTGATGGCTCAGTAAAGCCTCCATTGACAACAAGATAATTAACACTTTCAAATGCCCAAAAACATACTAAGACATATTTAAAACAGTTCATGTGAGTACAGTGGTTCAACCTTAATGTTATGAAGCGACGAGAATACTTTCTGTGTGCCAAAAAAACTAAATAACAACTTTATTCAACAATATCTAGTGATGGGCGATTATAAAACACTGCTTCATGAAGTTTCGAAGCTTTACAAATCTTTTGTTTCGAATCAGTGGTTCAGAGCATGTATCAAACTGCCAAAGTCACACCCCCCAGTGGTGAACCACTGAAATTTCGAAACTTTTCGAAACTTTTCGAAACACATGACTTAACAAAGCCTTGTTTACTGAAATCACATGACTTTGGGAGTTTGATACATGTCTTAGTACCTTTTTGGGCATTGAAAGTGTTAATTATCTTGCTGTCAATGGAGGCCTCAATGAGCCATCAGATTTCATCAAAAATATCTTAATTTGTGTTCCAAAGAAGAACGAAGGTCTTACGGGTGTGGAACGACATGAGGGTGAGTAATTAATGACATCATTTTCATTTTTGGGTGAACTAACCCTTTAATTAATTAATTAGAAATGTTAGAGAAAGGTAGAGATATTTATTGTAATATGCAGTATGGACAAAAAGAATGCATAAGAAAGAAGAGACTTGCAGCTTAGTATTCAAATGTTATGATGAATTTAAACTGAATTGTGATGAATTGTGGTGTCAAATAGGATGGATGGATGGATGGATGGATGGATAGATGGATAGACAGACAGACAGACAGAAAGACAGAAAGACAGACAGACAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGCACAGCTAGATCCGCATTCCCTGAAGGAAATGTCAGCGCTTACAAGGCAGCAAGGGAAAAATATCCAATTTTTAGCTAAGCTTTAAAGCTTTGGTTATGTGCAAATGACCCTTACCAGAAAACAATCCCCTAAACCAGATGTTTGAAGAATATCAATACATCCCTGCCTTGCAAGTACTGTAACTAGGGTACAAAACAAAACAGAAAAACAAGAAAGAAAACCAAAAGCAATGAAAGGGAAAGCAATTCTACCTTTACAGCATGTGTACACATGCAGACCACAGTGAGAAATGTGTGCTGTGATCCGTAGTGGGCAAATTCCTTTAGAATGACTTAAAGGTGCATATGTTGTGCATATGGGCACGGTGGATACATACGTGTTACGGGATTGTTCCAGCTATCTACCGCAGAACTGCTAACCCTGCTCACACCCACTTGGCTTTGCTCTTTTCTGCTCTTTAATTCCGAGATGAAAATTAGCCATTACCGAATTCCTGCTAAGAGTCAAAGTCAAGTGCTGGAGTCGGTCGGCCCTGGATTAACAGTGAACGTCCTACAGAAAGGCCGCACTCGGCATACAATGACAACCATCATTGCCGTAAACAGACACTCCTCAGTGGTGAATGAAGCATTGGCGAGAGAGGGTTACATAACCCGATTAATAAAGTGCAAAAACAAAAAGAAACTCACTTGCAAACTGAGAGAAAGGAAAACGGTGGAACTACCAGTGCAATCAAAAAGCGAAGCTCTAACCCTCTAGGCCAAGAGCTGCATCTTTCCTTTTTATCAGAGCAGGTGTCTCTGCAGCACATTGCTCCCTTTGAAATGAAGGGTAACATAAAACGGCCCTGGCGTGTTGTGATGGACAAGGAGATTTCACCTTCTCTAGTGAATGATAATACATTATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_01208525_01212914.mRNA True 2045 mRNA 0.39 3 1208374 1214517

Neighbor

gene id symbol gene type direction distance location
CI01000009_01138569_01164523 NA coding downstream 43837 1138249 ~ 1164537 (-)
CI01000009_01128947_01131135 NA coding downstream 77213 1128884 ~ 1131161 (-)
CI01000009_01121956_01122628 NA coding downstream 82587 1121187 ~ 1125787 (-)
CI01000009_01112860_01113252 NA coding downstream 95122 1112612 ~ 1113252 (-)
CI01000009_01061214_01063408 KLF5, KLF5B coding downstream 144966 1060175 ~ 1063408 (-)
CI01000009_01257207_01258196 GPR18 coding upstream 41960 1256477 ~ 1258196 (-)
CI01000009_01264011_01272894 GPR183A coding upstream 49090 1263607 ~ 1273340 (-)
CI01000009_01293719_01294750 NA coding upstream 78199 1292716 ~ 1294963 (-)
CI01000009_01327537_01337349 NA coding upstream 112795 1327312 ~ 1337846 (-)
CI01000009_01386589_01389680 NA coding upstream 171860 1383864 ~ 1390149 (-)
G51958 NA non-coding downstream 98142 1105830 ~ 1110232 (-)
G51970 NA non-coding downstream 103884 1103588 ~ 1104490 (-)
G51959 NA non-coding downstream 105989 1098226 ~ 1102385 (-)
G51960 NA non-coding downstream 113107 1094548 ~ 1095267 (-)
G52009 NA non-coding downstream 124792 1083319 ~ 1083582 (-)
G51957 NA non-coding upstream 16611 1231128 ~ 1233278 (-)
G52082 NA non-coding upstream 19535 1234052 ~ 1234740 (-)
G52083 NA non-coding upstream 20439 1234956 ~ 1235612 (-)
G52084 NA non-coding upstream 22045 1236562 ~ 1236785 (-)
G52085 NA non-coding upstream 22489 1237006 ~ 1237261 (-)
G52098 NA other upstream 187415 1401932 ~ 1407627 (-)
G52410 NA other upstream 1337207 2551724 ~ 2562533 (-)
CI01000009_02885473_02893975 NA other upstream 1669171 2883688 ~ 2893975 (-)
CI01000009_03261739_03262843 NA other upstream 2046686 3261038 ~ 3262843 (-)

Expression


Co-expression Network