CI01000009_01327537_01337349


Basic Information

Item Value
gene id CI01000009_01327537_01337349
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 1327312 ~ 1337846 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_01327537_01337349.mRNA
ATGTGATAATCAATGCTGTTTGGTCAATGATGTAAAACCTTGATTTAGAACTTCAATATGCGCAAAAGTGATTTGAGAGCCATGATTTTTTTTTTTTTTTTTTTTTTAACCAAAAATTGACATAAAATGTAGTCTATTCTTCACATAAACTTACCATATGGTTTAAGCTTTAGAATATAGCACACAAGTTGTATGAACTACTTCAATAAAGCTGTCTTGTCTTTTCTGACCACCCCTGGACACTGTGTGAGTTCAATGAAAGGACAAGTACAGCATGAAGATTTTTCTGTAGGCTATTTTCTATATTTCTTCCAAAACAATAAGACATAGAGGTTTGGAACAACATGAAGATGGGTACATGATGAAAGCATTTTTATTTTTGAGTGACTATTCCTTTAAGTGTTACATTAAGACATCAGGAGGATGCTTACGCAACGACTGCAGGGTACAGCCCATAGCAGCATGTGTGTGTGTGTGTGTGTGTGTGTAGGAGAAAGATGGATGGCCTAGCTGCACCACAGGTGGCTGAGGCCCAGCGCAGGGAGGATACGGAACAACTGAACGCAGAACAAATAGTGAGAACGCTTAGACACAGACAGACACAGTTTTATCTAATCCCAAACACTTCCTCTAGAGCTACCTATCACTACACAAGCCTGATTGGTTTACCTCGCCCTCAAGTGGTAGGACCTGCACAGCGTAAGAAGAGAAGTGGAGCACGTACATTCCAGTACCACGATATTTGGCGCCTATCGTGGGGTCATGAATCCAGCATCGCCCTGCATGGAATCGCTCCAACGCAGAGCTGCTGCGATCCACACACACTTGCGGTCTGCATGCGTGACAGTGGAAACATGACTGAAGGCTACGGCTATAATCCAACATTCCAAACCACTGAATACAGTATTAACATACAGAATCTAATGGAATCTGGAATACAAATGCTGAGCGGAGGGCAGCAGGGAATAAAAAGAGTGAACGTGGAAAGGCAGAGTGGAGATACCAACTGTATTCATACAGAAAAACCCAACCTAAATATTACGATGGTATTGAACGATTATGATGTGCACAGCTATGACACCAATCAGAATCTGCACAAAATCAGAGTGCTCAACGCAAGCCACAGGGAAATACACTTCATTACAGAGGAGAAAATTTTCTATGATACATTTGACCCAACTGGCATTGTGGGTATTTTTACAGCATCTAATGCTGTGCCTGCGCATATGGCACGAAAGGCGGTTTTGGGGTGCAACAGTGCACAGACTCAGGTTTTTGGGCGGCCTCGGGGCGAGGAGCATGGCTATCACCTATCAAAACAGCTGGGGCCCAGGAGGTCATCGCACCGTTACCATGACACCTCGGTGCTGACACCAGCTGCGTGCGACGGGAAACGGGTCTCCAGTCGCTTTAGCAACGCAAACATACGGTCGCAACAAAACGGGCTGCTGTCTATGGAGACTGTGATTAAACCAGAATGGCATGCAAGAATCCAGCCATGGGAAAAGGTTTCCAGCCTCATCAGTCCTCATAACAAAAGGACCACATTTCACTGCACCTTCACGAACAAAAGGATCTGGCAGGTTCCCAATATGGAACTAAATTACAGAGAATGGGACACTACCTTCACAAGTGACCCTTAAACTTAGGGTAAACCTTGTGGCGTCACAACAAAGCTACACTGCACCTTTTCACGATAGAAAAATGCAGACAGCTTCTGACAGTTGTTCCTAGGTAAAAAAAAAAGTGCCATCATAAAGCAGGGTCTAGGAAACAGGATAAGCACTCCAGCCAAGACTATAAAACGCTCGCTGGGAACTTGAAAGCCACGCAGGCAAAGTTGAGGGCTGCCATCTGGAAACAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_01327537_01337349.mRNA True 1868 mRNA 0.44 11 1327312 1337846

Neighbor

gene id symbol gene type direction distance location
CI01000009_01293719_01294750 NA coding downstream 32349 1292716 ~ 1294963 (-)
CI01000009_01264011_01272894 GPR183A coding downstream 53972 1263607 ~ 1273340 (-)
CI01000009_01257207_01258196 GPR18 coding downstream 69116 1256477 ~ 1258196 (-)
CI01000009_01208525_01212914 NA coding downstream 112795 1208374 ~ 1214517 (-)
CI01000009_01138569_01164523 NA coding downstream 162775 1138249 ~ 1164537 (-)
CI01000009_01386589_01389680 NA coding upstream 48531 1383864 ~ 1390149 (-)
CI01000009_01394603_01397604 ZIC5 coding upstream 56712 1394558 ~ 1398473 (-)
CI01000009_01423940_01424233 NA coding upstream 85865 1423711 ~ 1424573 (-)
CI01000009_01541031_01546978 NA coding upstream 203048 1540894 ~ 1547804 (-)
CI01000009_01550846_01564109 TMTC4 coding upstream 212938 1550784 ~ 1565168 (-)
G52102 NA non-coding downstream 11832 1305269 ~ 1315480 (-)
G52096 NA non-coding downstream 43405 1283543 ~ 1283907 (-)
G51951 NA non-coding downstream 57287 1267951 ~ 1270025 (-)
G52094 NA non-coding downstream 60700 1266178 ~ 1266612 (-)
G52091 NA non-coding downstream 83068 1242744 ~ 1244244 (-)
G52160 NA non-coding upstream 88228 1426074 ~ 1431565 (-)
G52157 NA non-coding upstream 108648 1446494 ~ 1450926 (-)
G52244 NA non-coding upstream 351226 1689072 ~ 1703392 (-)
G52267 NA non-coding upstream 555133 1892979 ~ 1893288 (-)
G52098 NA other upstream 64086 1401932 ~ 1407627 (-)
G52410 NA other upstream 1213878 2551724 ~ 2562533 (-)
CI01000009_02885473_02893975 NA other upstream 1545842 2883688 ~ 2893975 (-)
CI01000009_03261739_03262843 NA other upstream 1923357 3261038 ~ 3262843 (-)

Expression


Co-expression Network