LOC103032358 (asrgl1,LOC103032358,LOC105911569,LOC107695955,LOC107585330,LOC108442615,LOC107673965)


Basic Information

Item Value
gene id LOC103032358
gene name asrgl1,LOC103032358,LOC105911569,LOC107695955,LOC107585330,LOC108442615,LOC107673965
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035921.1
NCBI id CM008324.1
chromosome length 46505145
location 16439597 ~ 16452704 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007249442.3
attttttttcccctcactgtAGTCCTGCATATTAATACCGCACTGGCTGCTCCCGGGCTTCAGGCAACGCTGaCTCCTTCACACCTCAGACATTTGCTCAGGAATTCAGTCATACCAGTGCCGATGTTGCCTGTTGTGGTAGTCCATGGAGGTGCAGGTCACATTCCCAAGGACCGAGCTGAGCTCTCCTGCGCTGGGGTGCGTGAGGCGGCGCGGGGGGGTTATGCTGTTTTTAAGACTGGAGGCAGTGCCATGGATGCTGTGGTAGAGGCTGTTACCATAATGGAGAACAACCCAGCATATAATGCAGGTCGAGGATCGGTGCTGAATGTGAAAGGGGGAGTGGAGATGGACGCTCTGGTGATGGACGGACGCACTCTAGCCAGTGGAGCTGTGTCTGCAGTTAGGAGAGTGGCAAACCCAATCCAGCTCGCCAGGATGGTCATGGAGAAGACTAGTCACTTGTGTCTGACGGCAGAGGGGGCTTCTCAGTTTGCCAGAGCTATGGGTGTCCCAGAAGTGGAAGAAGAGTCACTGATCACTGATTATTCCAGGATGCGCTGGAAGAAGAACCTGCATCCAGATGCAAACCCTGTGGAGAGCCAAATGGGCAAGATGGGCACAGTTGGAGCAGTAGCTGTTGATGCGGAAGGAAATGTGGCCTGTGCTACTTCCACAGGAGGCATGATCAACAAAATGGAGGGTCGTGTGGGAGACACACCCTGTGTTGGATGTGGAGGCTATGCAGATAACCAGACCGGAGCTGTATCACCCACTGGTCATGGAGAAGCCATCATGAAAGTCACTCTGTCCAGACTAATCCTCTTCCATATGGAGCAAGGAAAAAGCCCGGAGGAGGCGAGTGACATGGCCCTGACCTACATGAAGGAACGGGTGAGCGGTCTGGGTGGTGTGGTGGTTGTGGACCCTAAAGGGACCTGGGCAGCTCGTTTCAGCAGCCTACAGATGTCATGGGCTGCCGCTCAGCAAGGACAGCTCCACTATGGCCTTTACCATGGAGAGGACTTTACTGAGCCCATATAGCATCTCTCCAAACAATCACATGTACACCTCCATACACACAAGACACGTTGTTGCATTCTTTTATGTAAGACTGAAATATAGTGGAAATCAGTATTCTAGAATTAATTTCAGTTGAAGATATAATGATACAGTCATCAGTattattaaactaatttaaaaatgaatttaaaaacaaatcagggggtgctgagtggtccagcggtctaaaaagcgctgccactatgattggaagatcactggttcgaatcccagtcatgcgacttgccatcatcatcctcagcagcagttcaaaaagaggcggtgactgacttcacatgtattggaggaggcatgttttagtcttcaccctccttgtgttgtggcatcactagtaatgggggatatacagctgaggaGCAGCTAAACTGGGAGGAAAATGGgagaaatttagaaaaaaaaaaaaaagacaaatcagTATTACTAAACTGCTTtaatatatcatttaaaaaaaaatcaatattaataaacCACTTTTACAAGATCTACTTCAAAATGTAAGAAATTACTTAAAACCAGTACCTCATATATACATTACCGTATATACACTCCAGCAACAGGATTTATGTCATGTTAATGTATAGCACTGCTAGTACTGTGTGTCTCCACTAGATGGAGGTAAAAGGCACATCTGGTAAATGAATGTGTATTATGGGTTCTCACTTCCTATTTACTGTGTAAACTGCTCTCCAGCAGCTGCTAACTGTCAATCAGTAAAAGTGATTCattctaaaataaatttatatttgcaagaacaaaa

Function

symbol description
asrgl1 Predicted to enable asparaginase activity and beta-aspartyl-peptidase activity. Predicted to be involved in asparagine catabolic process via L-aspartate. Predicted to act upstream of or within proteolysis. Predicted to be located in photoreceptor inner segment. Predicted to be active in cytoplasm. Orthologous to human ASRGL1 (asparaginase and isoaspartyl peptidase 1).

NR:

description
isoaspartyl peptidase/L-asparaginase

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0033345 asparagine catabolic process via L-aspartate biological_process
GO:0005737 cytoplasm cellular_component
GO:0003948 N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity molecular_function
GO:0008798 beta-aspartyl-peptidase activity molecular_function
GO:0004067 asparaginase activity molecular_function

KEGG:

id description
K13051 ASRGL1, iaaA; L-asparaginase / beta-aspartyl-peptidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007249442.3 True 1840 mRNA 0.46 7 16439597 16452704

Neighbor

gene id symbol gene type direction distance location
mb21d1 NA coding upstream 323107 16110265 ~ 16116490 (+)
LOC103021740 LOC108442579,LOC108263602,LOC108258313,LOC108441988,LOC105023253,LOC107716315,LOC107693767 coding upstream 331031 16103228 ~ 16108566 (+)
LOC103022067 slc17a5,LOC107673875,LOC107585335 coding upstream 337678 16089846 ~ 16101919 (+)
rin2 LOC108442550,LOC107673857 coding upstream 352633 16024820 ~ 16086964 (+)
LOC103022884 NA coding upstream 416758 16017400 ~ 16022839 (+)
b3gat2 b3gat2 coding downstream 71413 16524117 ~ 16551646 (+)
LOC103035008 slc2a15a,LOC103035008,LOC108442702,LOC107716293,LOC107673883,LOC108262874,LOC107585370,LOC107708408,LOC107696166 coding downstream 400000 16852704 ~ 16879760 (+)
fgf8_1 fgf8,fgf8a,LOC107673879,LOC107716294,LOC107696243,LOC108442712,LOC107585369 coding downstream 463997 16916701 ~ 16922940 (+)
fbxw4 fbxw4,LOC107716323,LOC107707737,LOC107694796,LOC107673945,LOC107588663 coding downstream 478394 16931098 ~ 16967406 (+)
wbp1l wbp1l coding downstream 529349 16982053 ~ 16994408 (+)
G216910 NA non-coding upstream 116296 16255488 ~ 16323301 (+)
G216894 ddx43,LOC107693529,LOC107588708,LOC105911636 non-coding upstream 311014 16117859 ~ 16128583 (+)
G216893 NA non-coding upstream 330156 16108729 ~ 16109441 (+)
G216831 NA non-coding upstream 516286 15914931 ~ 15923311 (+)
G216793 NA non-coding upstream 769861 15669518 ~ 15669736 (+)
LOC103031925 NA non-coding downstream 2633 16455337 ~ 16469869 (+)
G216953 NA non-coding downstream 33198 16485902 ~ 16487538 (+)
G216941 smap1,LOC107588664,LOC107694205,LOC107585328 non-coding downstream 108148 16560852 ~ 16719481 (+)
LOC111196035 NA non-coding downstream 430321 16883025 ~ 16898394 (+)
G217109 NA non-coding downstream 556870 17009574 ~ 17009798 (+)
bcl11a bcl11a,bcl11aa,LOC107666449,LOC107601892,LOC107743494,LOC107655449,LOC107559339 other upstream 1659284 14722400 ~ 14780313 (+)
gsto1 gsto1 other upstream 2092264 14342232 ~ 14347333 (+)
spef1 spef1 other upstream 2689291 13740513 ~ 13750306 (+)
LOC103033819 LOC108426824,LOC108263419,LOC107725444 other upstream 2955226 13479176 ~ 13484371 (+)
trnay-gua_11 NA other upstream 3123435 13316075 ~ 13316162 (+)
borcs7 borcs7 other downstream 551837 17004541 ~ 17007537 (+)
LOC111195981 tacc2 other downstream 696638 17149342 ~ 17184251 (+)
pax2 pax2,pax2a,LOC107668824,LOC101463634,LOC107588637,LOC107716343,LOC107585307 other downstream 1551549 18004253 ~ 18039352 (+)
eif4ebp2 eif4ebp2,LOC107564345,LOC107716353,LOC107668794,LOC107673927 other downstream 1859189 18311893 ~ 18317228 (+)
LOC103030769 LOC103030769 other downstream 2290502 18743206 ~ 18744327 (+)

Expression


Co-expression Network