CI01000009_01386589_01389680


Basic Information

Item Value
gene id CI01000009_01386589_01389680
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 1383864 ~ 1390149 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_01386589_01389680.mRNA
ATGTCTAGAGGGTCCGTTAAGTTTTGAGGGAAAATTATAACAAAACTTATAATTAAAGAAAAGTAGCCTATCACATTGTGAACCGACTGCAAAAGTGTGTTTACAAAATTCATACGAATGTCTAATGCAGAATTTGAGCAATTTGTGTCAACATTTTTATATATTTCTTATTAAAAATGTTTAAGTAAACCTAGTTAATTAATTATTGCATTGCTTCATATCATTAGTGAGATTAGTGTTCATGTATAAGAAAATAGATTTGCCTTTTTTTCCTCAAATAGCTTTGAAAGTACAAAAGGAGAGTGTATTTAACATTGTTTAAGTGTAGTGGCCATATTAACGGTACATATTGTGGGCATATCATGTGTACAGAAGAAACTACAAGATAAAAAAATCTTGATAAAAAACAAGATAAAATTTGAATTTAACATATGCACCACAGAGATGAACTTTTTCATCACTCACACATATGAATCAGCTTGACTGTCTGCATGAGACAACTATCATAATATCAGGCCTCTCCACAACATCTGTGGGCCTCCAAACTTGGTGCTGGTCCAAATATGGATCCCCAGGATTGGGAGGCTTTCCAAGGCTCTTGGTGATGAGAGCAAGGTCGTCCACGGACATGTCCAAGAGCCAGAGCTCTACACCTGAATTATCATGCAGCAAAACAGGAACGCCCCCGCAGACAGCTTCTTTTCATCACCTCGTGCTTATCACCGGCATTGTCAAAATGTTCGTTGAGGGCCGGGTGCTCTGCAAGGGGCTCCGATTGAAAAAGCAGAGCCCGGGCTCCTGCCTCGTCCAGGCAGGGTTAAGCCACCTCTCCAACCAGGCGGCCCCCAGCGGAACCCTCATTACTTTGGCTCCTGGAGCAGTCAGCTGTGCTGTGGTTCAGAGAAGAGAGGCTCCTTACCTGAGCATCACTGCTTCCACACGCGCCTTCGCCAACCTGATTTGACAGCTCACGCTCAACTACAGCCTGCTGAACTAAGACATGATAAAAATACATTTCGCTTCGTTCTCTGTGAAATGTCACTGTCTTACTTTTGCTGGGGGTATGTGACAGCACTTAGCTTGACTTGAGACACCTTTTAGTGCCAGGGTTTGTTTGTTTAAATCCACTTCTAGTTATAATTTGTAGTGTTTATGCTGTCTGTATATTCAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_01386589_01389680.mRNA False 1176 mRNA 0.41 2 1386377 1390149

Neighbor

gene id symbol gene type direction distance location
CI01000009_01327537_01337349 NA coding downstream 48531 1327312 ~ 1337846 (-)
CI01000009_01293719_01294750 NA coding downstream 91414 1292716 ~ 1294963 (-)
CI01000009_01264011_01272894 GPR183A coding downstream 113037 1263607 ~ 1273340 (-)
CI01000009_01257207_01258196 GPR18 coding downstream 128181 1256477 ~ 1258196 (-)
CI01000009_01208525_01212914 NA coding downstream 171860 1208374 ~ 1214517 (-)
CI01000009_01394603_01397604 ZIC5 coding upstream 4409 1394558 ~ 1398473 (-)
CI01000009_01423940_01424233 NA coding upstream 33562 1423711 ~ 1424573 (-)
CI01000009_01541031_01546978 NA coding upstream 150745 1540894 ~ 1547804 (-)
CI01000009_01550846_01564109 TMTC4 coding upstream 160635 1550784 ~ 1565168 (-)
CI01000009_01596212_01681960 NALCN coding upstream 205552 1595701 ~ 1682027 (-)
G52102 NA non-coding downstream 70897 1305269 ~ 1315480 (-)
G52096 NA non-coding downstream 102470 1283543 ~ 1283907 (-)
G51951 NA non-coding downstream 116352 1267951 ~ 1270025 (-)
G52094 NA non-coding downstream 119765 1266178 ~ 1266612 (-)
G52091 NA non-coding downstream 142133 1242744 ~ 1244244 (-)
G52160 NA non-coding upstream 35925 1426074 ~ 1431565 (-)
G52157 NA non-coding upstream 56345 1446494 ~ 1450926 (-)
G52244 NA non-coding upstream 298923 1689072 ~ 1703392 (-)
G52267 NA non-coding upstream 502830 1892979 ~ 1893288 (-)
G52274 NA non-coding upstream 584053 1974202 ~ 1975828 (-)
G52098 NA other upstream 11783 1401932 ~ 1407627 (-)
G52410 NA other upstream 1161575 2551724 ~ 2562533 (-)
CI01000009_02885473_02893975 NA other upstream 1493539 2883688 ~ 2893975 (-)
CI01000009_03261739_03262843 NA other upstream 1871054 3261038 ~ 3262843 (-)

Expression


Co-expression Network