inpp5f (inpp5f,LOC107666413,LOC107726944)


Basic Information

Item Value
gene id inpp5f
gene name inpp5f,LOC107666413,LOC107726944
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035921.1
NCBI id CM008324.1
chromosome length 46505145
location 14454016 ~ 14479060 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007252248.3
tgtgtgtgtgtgtctctctctctctctctctctcattcacggAGGAGGAAAATATCAGAGCCGGAGTCAGACACGACACAACATGTCGCTCGGGTTGTTTGGTGAAGTGTCTGTGTTGAGATGGGAAGTAGGACTATTAGCTCGGGAACACAGTAAACAGACGTCATGCCGACGTTTATTGTAGTATAAGGCGAGGCTGAGGTTTGGGTTGGTAGTCAACGTTAGTTAAGCTAACCTAGGATAGCTAGGTTAGGTTACGTTATATATAGATTAGATAGGCTAGCTGTCGATGCCCAGCTGATTGAACTGGCATTAATCAGTACGGGAacacgttagctagctcgccggcTAACTGCCAGTCGGCTGGCTTGATGTGTTCTGCCCGCTGGCTTCTCGGGCCGAATGTATCGTTAGTTGGCGGGTGTTTAGGGCTGAATAATTATAACTACATGTTTTTGGTGTGACCTGCAGTCGACATGGAGCTGTTTCAGGCGAAAGACCATTATATTCTCCAGAGCGGCGACAACGCGCTGTGGTGCAGCAGGAAGGACGGCTCCCTCAGCGTGAGACCCGCAACTGATTTGCTACTAGCATGGAACCCTATATGTTTGGGACTGGTGGAAGGTGTTATTGGAAAAATACAGCTTCATGCCGACTTTCCTTTGGGCCTCGTTCTGATCCGCCAGAAAGCACTGGTGGGCTTGTTGCCAGGAGACCACAAGGTCTACAAGATCACCAAGATAGCAGTCATTCCACTTTCAGATGAAGAACCACAGGACCTGGAGTTAGAGctTTGTAAGAAGCACCATTTTGGAATCAACAAGACAGAGAAAATCACTCAGTCTCCTGATGAGTCCAAGTTCCTGTTGAAGACTTTTAGTCAAATCAAGTCTAATGTTGCTGTTCCCATCAAGAAAAAGGTAAAAGAGAACAAAGAAAAGGAACGTCTGGAGAAGAGACTGCTTGATGAGCTCTATAAGATATTTGTGGATTCCGATTCCTTTTACTACAGCCCCACGTATGACCTTACAAATAGTGTCCAGAGACAGGGAGCATCTGAGAAGTCTGATCTGCCACTGTGGAAACAGGTGGATGACAGATTCTTCTGGAATAAACACATGATACAGGACCTAATTAACCTACAGGTTCCTCAAGTGGACTTCTGGGTGATCCCTATAATCCAAGGCTTTGTGCAGGTGGAGGAGTTGGTGGTGAATTATAACGACAGCCCTGATGAGGAGAAGAGCAGCCCAGACACGCCACCACAGGAGCACACCTGTGTGGACGATATCCACCCTCGCTTTACTGTGGCACTCATTTCCAGACGGAGCCGCCATCGTGCAGGCATGCGTTACAAACGCAGAGGAGTGGACACTGAAGGACATGTGGCCAACTATGTAGAAACGGAGCAGCTAATCCATGTACATAGTCACACACTGTCCTTTGTGCAGACGCGAGGGTCGGTCCCTGTTTTCTGGAGCCAAGTTGGGTACCGCTACAATCCCAGACCGCGACTAGAGAAAGGAGAGAAGGAAACCGTTCCGTATTTTTCTTCGCATTTTGAACAGCAACTAAAGATATATCAGAAGCAGgTCATCATCAATCTAGTGGACCAAAATGGGCGTGAGAAGATGATTGGCGACGCATTCCTCAAACAAGTGCTGCTGTACAACAACCCCAACTTGACCTATGTCTCTTTTGATTTCCATGAGCACTGTCGAGGGATGAAGTTTGAGAATGTGCAGACTCTCACTGACGCTATTGCTGATATCATCACTGACATGCGATGGGGATGGGTGGACCAAGCAGGAGTCATCTGTACGCAAGATGGCATTTTCCGTGTCAACTGCATGGACTGCCTGGACAGGACTAATGTAGTTCAAGCTGCTATCGCTCGTGTGGTTATGGAAAAGCAGttgAAGAAACTGGGGGTGATGCCCCCTGAACAGCCGCTTCCCCTAAGGTGTTACAGGATCTACCAGGTGATGTGGGCCAATAATGGTGATACCATTAGCCGCCAGTATGCCGGCACAGCTGCTCTCAAGGGGGATTTCACACGGACAGGAGAACGCAAACTGGCAGGAGTGATGAAAGATGGTGTGAATTCAGCTAATCGCTACTATCTAAACCGCTTTCGTGATGCATACCGACAGGCAGTCATTGACCTCATGATGGGTCTTCCTGTGACCGAGGACCTGTATTCCATCTTCAGCAAAGAAAAGGAACACGAGGAGAAGGTGAAGCAGAGCCAGAGAGGAGCACAGGAGCAGGTCAGCCTCCTCTTACAGACGTACATgcagctcctgctgccagaTGATGAGAAGTTCCATGGTGGCTGGGCCCTCATTGACTGTGACCccagCCTGATTGATGCAACGCACAAAGATGTGGATGTCCTTTTACTGCTGTCCAACAATGCATATTATGTTGCGTActATGATGAGGAGGCAGATAGAGTTAATCAGTACCAGCGTCTCAGTTTAGAAGGTCTGGAAAAGATTGAAATAGgcCCAGAACCAACTCTGTTTGGCAAACCCAAATACTGCTGCATGCGACTGCATTATAGAAACGAGGAGACGAGTGGTTACTTCCATACCCTGAGAGCTGTCACACGAAACCCAGAGGATGATGGAAAAGaCACACTGCAGTGCATAGCAGAGATGATTCGCATCACTAAACAAGCTATGGGACTTGATCTACCAGTAATAGAGAAGAAGTTGGAAAGGAAACACAGTAAACCACATGAAGACATCATGGGCATTCAAGGAAAAGCCAATGAGCAAATGCTTGGCTCAGGCTTAGCTCAGGGCAAAAGTTTCCTCATGAACAAGTTCTCATCCTTAAATCAGAAAGTAAAGCAGACTAAAACTAATGTCAACATTGGGAACTTCAAGCCCCTTGGTAGACTTGGCAACTTTTCCAAGCCAGAAGTGAAAGTAAACTTCTTAAAGCCCACCATGCATGTGAACCTCTGGAAATCAGACAGCAGTTTGGAGACTTCAGATGGGAATACAGGCTCTGGAGGCCTTAAGGATCTTCGTGATGATCATTCAGATGCGGGGATCTCCTCCGACTCTGACTCTTGCAATTCAGATGAGCAGCCATGTTCAGGCTCCCTGGAAAACATAGACTATGTTCTCCCCAGTTGTGGCATTGTAGCATCTGCACCTCGACTTGGCAGCCGCTCTCAGTCCATTGGTAGTGTGGAGCTCGCTGTGCCCTCTGTTATTCGTGTTACAGGCTGCGAGAACAAGGTAGAGGACAGTTTATCAGTTGAAGCAAGTGCTCAGTCCCCTGGGGCAGCCTCCGAAGCAGAAGAAGCCATTTTGATTGACTTTGGGACTCCTGTTGACGCTTACTGCCACCAGTTTGTCCAGGATGCCCAGATAAAACCAATAGAAGTGTTTGAGGAACATCCAGTACTGCCACCAAATTCGCTGCCATCTCAGGGTCCAAAGGTTGCATCAGCTACAGGCACAAAGCCAGATTCATCGAacccacagcagcagcagcagcaacagctccCTCGTCCTTCACAGCTTGATGTAGAGCCTACCGTACCAGGGGGATATCTTCTTACCGTCCAGCCTCCAGGTTCTGCGGCGTCATGCGGCTCACAGAAGAGCTTTGGCTCCCATGTGGAAGGAAGCCTAGGGCCTTCCCCAGCAGACAGCAATGGAAGTCGAGTGGTGTCTCCCTTTGCAAAGATCAAGAGCTCCATGGTGCAGGTAGCTAGCATAACCCAGGCAGGACTCACCCAAGGTATCAACTTTGCTGTGGCAAAAGTGCAGAAAAGTCCAGAGCCAGAAGCAGTCAATGAGGTCCAGGAGAATGAATTGCGAGCGATGTTTACACAGTGCCAGACTAGGATTATTCAGATAtagcgtgttttttttttttggcttcatGCATATACATGCATTCTGTATGTTTTTAGCTTAGAATGGGACTTCCAGCACAGTAGCAGTAGCATAAGCTTGCACAAACAGTGTACAGAGTCAGCTAACTTCCCTACTCCTTATTCTCCGCTAGTTAATCCAACTGATGTTTACAGCTAGTGTTGTGTAAGTATATAGTATACACCTAAGCTGAACCTGATCTGTGCCCTTATGAAAAAAAGTCCTTAATATCCATACATTATTACCAGTTTTGCATGTTGAGAAATTGGTCTAGAATAGGTCAAAAGAGAGAAGAGGACCTAATTTTGAAACGTGTGACTCCTGCTCCGCATCAGTCGAGTGTTGTAGCTATAGCCGAAACATGTAGTACAATAGCCAGATTCATAAATATCTATTCAGTGGGCAGCTCAGTATTAGACAGTAGAATAAAAAGAGGAACGTAAACAAAATACATAAGTATAGCTCAAGAAACGTCTTTGTTGTGGTGTATATCAATAGAAATGTACCAAAGTAGCAACAGAGTACTAGGTCATAATCTATGGTTAAATAATACTATTGTCCTGTATGtaattagtatattatataaaaaaaagaacagtactGTATGAGTCTTCTGACGTTGAACCCTCCATtcaatatatttagatatatatgtatatagatatacataCGTTTCTTTATCGTGATGATTGAGAAGAATACCACTTCAAATGGGCACTTGAAGCGCCTCGAGTTGTTAGACATTTCTATATGCATTAGCGTTAATGAATTAGAAATCCCGCTTAAAGGTACAATAAGTAAAAAATTTCATTACAGCTTGATACAGTGTTTATCTCGTTATTTATTGGTGGTTAAATGGCTCTAAACAGTTTGTGAGCTGGAAAACTGCCTTTCTTTTCTACTACCATAGTTTGAGCGATTTTGTGCGGTGATGAAATATAATATGAGTAAATACAGGCTGCATCATTGTGAATTCACGTGTTTGACAAACTGTGTTTATAATCATAAACAAATCGCAAACTAGTATTACTTATTGTACCTTTAACCATATTATCATGTTGCGTTACATGggggaaaaaatctatttattaaaactattatataCGTTTTCTTTCTAAATTATACAAGTGACCTGTTATGTTACGTTTTTCCTAGAAATGCAGTAGGATAATGGCAGTGGTCAGTGTCTTAAAATATCCTTGTGTAAAATGTTCTATTCCTCTAAAGGGTTAAAGTCTATTTGCAATGAAGGCCTGCATCAGATACCTGCCTAaatctgttgtgttttaaaTACGTTTTTGTATTTCCGATTTCCGAATGAAAACTGACTCAAAATAATCTGTATACTTACAAATAACAATGTTTATATGAATATGcatataatactatatataatacTGCTTATGACTCCTTATGACTGCTTGTAACTCCTCTTTAAGCAGGTATTTGATGTAGCTCAGATGCAAGAAACCCTGGCCaaatgttaaaaacactgtaaaatgctTTTTGCACTCTTAAATATCAAGAGTAAGCCTTATATTAAGAATATTAAGTGCAGGTATTTTCTGACAAATCTACCTTCATATTCaatgtttataaatgctttcattCAGGTTCTATTTTGCTGGGTCTGCAGTGTAGTAAAATCAGATTTATGCCACGTTAATACTGTTTGTTGATGTTTTGAAGCTCAGGCTTGAGATCTGACCTTTGGGGTGCTTCTGTTTGATgtgatatttaatataatggAGGAAATATGGGGCTGTATGAGGCCACCTTACCTGTGAGGcctatttttctttaattaccCCACTATAATGTTATGTCATGTAAGGGGCACTGTTACAAAGACCACTTTTTATTCCAGCAGTTCTGTATACAATATTTTGAGGCTAGTCTGTAGCATGTGATCATGTTGCAGTGAATACCGTCTCTTATTGCTAAAAACTTTTTATAGCCCAAAGCAGaccaataataaatacattttgtctgGAAGAAAAGTTTCTGTAGAACGTGTGATGGCAATTAAAGCTTATTTAAAGTAGGATGATGCTTTAGAAGAGCTACAGTTTACTGTTAATCCTCAGACAAAATGACTGGTAATATTGTTGAGACTGGCTTGATTCAGAAATATATAAGATGGTTAGCTGTTTTATCAGGTTACTTTTGATAATCTAGTGGACTAGAACAGATTTTTAAGAAAGACATGGTCATCTCAAGCCTGAGGGTTGATGGgttgttttgtcttttatgAATCATGTCTTTTAAACTGCAATCTTTTGTTTACTCACTTGCTGTATGGAGCTTCATTATTCATGCATGCTTTTACTTACTGTGTAAGTAAAAGAAACCCACTATTCATTTCCTTAAACCCTGTAGGACCTGGTACATCATTCTGGTACCTCCTGACATACCATCGGCACTGTCTGAACTTGAATAAGGTGGTAGTATAATGCTGTTTTCATTATATGTATGTTGGGTAAATGGGTTTGGTTTATAGGTTTTAGGAGTATTTTGGTTTTTAAGCATTTGATGGCATGCACTGAACTGGAGACTATAGTGGAAACTTAAAACATTCACACAAGGAAGTggtacatacatttaaaatcttCCAAAAAGCATTAACCTGCTGTGTAAGTAAACATTCCTCCTGTTATGGGTGTTCACTTAagcttttccttttattttgtgtttcatGTACGTTTTCCTGTATTTCATTTATGATTTTCTATGCATAAGGAGTTGCACcttccttgtttttttgtgttcccCAAATTTGCTGAAAAAAGGAGTTATTTGACACAAAGTGCTTTTGAAACCTCATTTTATTTGCCATTTATGTCTTTTCCTCACTGAACTGACATGTTGTGCTAACTGAATTTATGTTCTGTctctttgaaaatgttttatttctcagtCATGTAGTGTTCAGTGTCACTTTATTGCACAGCATTCAAGCACACTTTCCAGTATCTTCCCATGTGTGTGATCAATGGCCTCTTCCCCACAAGTGTGTGAGGTGTTTCCAGCCAATGTACCTGAACTTTTATTGTATCGTATAATAGCCTATTTATTCTTAGTCTTATAAACTTCATAAACTTAATTCCCTGTGTTtgctaataacatttaacagttGTGTATAAatgctgtattttaaaatgttaagggGCATATCTTGGAGGTTCTTTAAGTAAATAATTGAAAGGAAA

Function

symbol description
inpp5f Predicted to enable inositol monophosphate 4-phosphatase activity and protein homodimerization activity. Predicted to be involved in clathrin-dependent endocytosis and regulation of endocytic recycling. Predicted to be located in clathrin-coated endocytic vesicle; early endosome; and recycling endosome. Orthologous to human INPP5F (inositol polyphosphate-5-phosphatase F).

NR:

description
phosphatidylinositide phosphatase SAC2-like

GO:

id name namespace
GO:0042578 phosphoric ester hydrolase activity molecular_function

KEGG:

id description
K21798 SAC2, INPP5F; phosphatidylinositol 4-phosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007252248.3 True 7108 mRNA 0.42 20 14454016 14479060

Neighbor

gene id symbol gene type direction distance location
bag3 bag3 coding upstream 3145 14442676 ~ 14450871 (+)
LOC103031316 LOC108426755 coding upstream 23275 14418969 ~ 14430741 (+)
atoh7 atoh7,LOC108426756,LOC107666420,LOC107726941,LOC107601814,LOC107655428,LOC107743508 coding upstream 42593 14410095 ~ 14411423 (+)
LOC103031627 LOC108426796,LOC107559326,LOC107655434,LOC107743509,LOC105911640,LOC106576688,LOC103353499 coding upstream 58948 14382712 ~ 14395068 (+)
calhm2 calhm2 coding upstream 74842 14373831 ~ 14379174 (+)
sec23ip sec23ip,LOC107655440,LOC107666414,LOC107743502,LOC107601884 coding downstream 14793 14493853 ~ 14505846 (+)
pcbd1 pcbd1,LOC107743500,LOC107601888,LOC107655445,LOC107559335 coding downstream 129115 14608175 ~ 14612568 (+)
LOC111195974 NA coding downstream 160806 14639866 ~ 14640543 (+)
fancl fancl,LOC107585345 coding downstream 1037678 15516738 ~ 15542681 (+)
LOC103023506 LOC103023506 coding downstream 1370792 15849852 ~ 15854753 (+)
G216435 NA non-coding upstream 50552 14402585 ~ 14403464 (+)
G216410 NA non-coding upstream 99197 14353101 ~ 14354819 (+)
G216408 NA non-coding upstream 102103 14351568 ~ 14351913 (+)
G216354 LOC108426801,LOC107726962 non-coding upstream 188667 14255407 ~ 14265349 (+)
G216441 mcmbp,LOC107743503,LOC107559330,LOC107655439,LOC107726945 non-coding downstream 8699 14487759 ~ 14488523 (+)
G216505 NA non-coding downstream 135086 14614146 ~ 14616451 (+)
G216508 NA non-coding downstream 138258 14617318 ~ 14618083 (+)
G216507 NA non-coding downstream 144600 14623660 ~ 14630795 (+)
G216520 NA non-coding downstream 163858 14642918 ~ 14645082 (+)
gsto1 gsto1 other upstream 106683 14342232 ~ 14347333 (+)
spef1 spef1 other upstream 703710 13740513 ~ 13750306 (+)
LOC103033819 LOC108426824,LOC108263419,LOC107725444 other upstream 969645 13479176 ~ 13484371 (+)
trnay-gua_11 NA other upstream 1137854 13316075 ~ 13316162 (+)
trnay-gua_10 NA other upstream 1138816 13315112 ~ 13315200 (+)
bcl11a bcl11a,bcl11aa,LOC107666449,LOC107601892,LOC107743494,LOC107655449,LOC107559339 other downstream 243340 14722400 ~ 14780313 (+)
borcs7 borcs7 other downstream 2525481 17004541 ~ 17007537 (+)
LOC111195981 tacc2 other downstream 2670282 17149342 ~ 17184251 (+)
pax2 pax2,pax2a,LOC107668824,LOC101463634,LOC107588637,LOC107716343,LOC107585307 other downstream 3525193 18004253 ~ 18039352 (+)
eif4ebp2 eif4ebp2,LOC107564345,LOC107716353,LOC107668794,LOC107673927 other downstream 3832833 18311893 ~ 18317228 (+)

Expression


Co-expression Network