CI01000009_01541031_01546978


Basic Information

Item Value
gene id CI01000009_01541031_01546978
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 1540894 ~ 1547804 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_01541031_01546978.mRNA
ATAGAAATGGAACAATCTGTTTAAAATATGTGCCAAGTTTTTAGAAATGTGCTCTTTATATTTATATTCTCGTTGGTTTCATATGCTTATGAAAGAAATTATGTTTTACACATGACATTTACAACCTGAAATTGCCTTGCTTTGTCATAAAAAGGTTAAAATATCTGATATTTTAAGAGACTTGTTGACCTTGACGTAGTCATGGGGGTCTGAATAAGTTCTCTATCTATCATTTCCTGCATTTTTTTTTTTTGAATGTTAATACTTACATGACTTGTAGTTTTGCTAAAATATATATATTTTTAAGAAATAATAATAAAAGGTTATGCCAAACCCCTTAATTATTTTAATGAGGCTTTTTTTCTATTATGAAATCATTCTTTTTTATATTTTTTTTGGGAGCATAAGCCCCCAAAATATCTAAATCAATTTCAAGTACCTAATTGCATTTTATGTATTTCTGGATAAATACACTGGGGGGAAAAAAAAAAAAAAATGGTGTAGAAACAATTTTCAATCAGAAATTGCTATTAAATTTCACAAATAATTACAAAGAAATGGCCAATAAAACAGACTGAAATAGTATTTTCTTGAAAAACATACTTATACTTTTTTACAACTTTTAAAAATTATTTTTTACAGTTTAGCAAAAAATGAGTGTCACCTTATTGATCTAGTAGACAACTTAATAGCGTAAAACAAAAGAATAAACATGAAAATATACACATAAAAAAAGCCAGTCTTATTGTTTAAAATAAAAAAAAAGTCTTCCTCAGGGAGGCAAATGGAGAGAATATGGAGAGCCCTAGCTGTTTTGCAAAACAAAATGAGATGCTCTGGATCTTACAGAGAAAGAAAAAGTGCACTGAGATGGAAATTTATTAACTGGCACCAGTTAATGTGTGCATTATTCATTTCTGCACCACCCCTCTTTAGCTCAGCGAGGGCAGCGAGGAGGAAACCGTGCCAGTGGCATATGGCTTGCCACTGCGCTAAACATCCATACTACAGACAGGTCCATCAGTCACAGCTCTGGCCGTGTGAGAGGCGAGTATGGGTGCCTGATAGATGGTGTTTAGAGCTTACCTGCTGTTACGACATCACCACTGAAACACTGGGCTCCCCCCAAAAGCCCACGCCGACACTGGAAACCGCAAAGCGTGAAATACTACGTCTGGAAGTGCCTACCGAGTCGGCCGAGTTACAACAAATAATAGATAAGCTATTTAAACCCTCAGTTAGGGACCCTGGGTCAGAGCCGCGCACATGCCAATTAATACGCAACATCTGCCATAGAGGGAATGTATATGAGGAGCCTAGGTTCGATTCTGGTGCTCTGCTCGCCTGGCAGCCCCAGTCAGACACGAGTGAGCAGGGCCAGAGGGGTTGTGTTCTCCCTGTGCCTCCCAGCCCGACGGACACCACCACCACAGTGCTGCACGCAGGACGCCAGCGCTGTCTTCTGGCACTTCCTGGGGCCAGTGCCGACTCAGCGTGGACACAGACTTACTCAGCAGCCACACCTTTACACCAGACTCACTCACACAGAAAACACTCACACACACATCCACAGCAGCACACGCTCCAAGATACTGGCCTGTTCCTCTTGTCACCGACTGACGGCTGCACTCCAGCGCGAGCGATGCTAATTAAAGTCCACCCACAGCATGATTCACCGAGTGGTGAGAGGAAAAGATATGGAGCATAGAGGTAAGAGAAGAACCGTGGTTTTGCTCAACACTGTTGAATAGCCACTACTGAAACGCAACACTATGAGACTTGTCTAAATTAGAATGAAGCTTTACTCCGCTGGACTCTCTCTGCATCAAGACACTCTGGATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_01541031_01546978.mRNA True 1845 mRNA 0.41 4 1540894 1547804

Neighbor

gene id symbol gene type direction distance location
CI01000009_01423940_01424233 NA coding downstream 116321 1423711 ~ 1424573 (-)
CI01000009_01394603_01397604 ZIC5 coding downstream 142421 1394558 ~ 1398473 (-)
CI01000009_01386589_01389680 NA coding downstream 150745 1383864 ~ 1390149 (-)
CI01000009_01327537_01337349 NA coding downstream 203048 1327312 ~ 1337846 (-)
CI01000009_01293719_01294750 NA coding downstream 245931 1292716 ~ 1294963 (-)
CI01000009_01550846_01564109 TMTC4 coding upstream 2980 1550784 ~ 1565168 (-)
CI01000009_01596212_01681960 NALCN coding upstream 47897 1595701 ~ 1682027 (-)
CI01000009_01743393_01795392 FGF14 coding upstream 195314 1743118 ~ 1795461 (-)
CI01000009_01925054_01944771 ANKRD44 coding upstream 377131 1924935 ~ 1944771 (-)
CI01000009_01954952_01964842 SF3B1.S, SF3B1 coding upstream 406755 1954559 ~ 1965237 (-)
G52157 NA non-coding downstream 89968 1446494 ~ 1450926 (-)
G52160 NA non-coding downstream 109329 1426074 ~ 1431565 (-)
G52102 NA non-coding downstream 225414 1305269 ~ 1315480 (-)
G52096 NA non-coding downstream 256987 1283543 ~ 1283907 (-)
G52244 NA non-coding upstream 141268 1689072 ~ 1703392 (-)
G52267 NA non-coding upstream 345175 1892979 ~ 1893288 (-)
G52274 NA non-coding upstream 426398 1974202 ~ 1975828 (-)
G52222 NA non-coding upstream 442817 1990621 ~ 1991986 (-)
G52230 NA non-coding upstream 546564 2094368 ~ 2096052 (-)
G52098 NA other downstream 133267 1401932 ~ 1407627 (-)
G52410 NA other upstream 1003920 2551724 ~ 2562533 (-)
CI01000009_02885473_02893975 NA other upstream 1335884 2883688 ~ 2893975 (-)
CI01000009_03261739_03262843 NA other upstream 1713399 3261038 ~ 3262843 (-)
G52828 NA other upstream 2669616 4217420 ~ 4231469 (-)

Expression


Co-expression Network