kif1bp (kif1bp,LOC107743600)


Basic Information

Item Value
gene id kif1bp
gene name kif1bp,LOC107743600
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035921.1
NCBI id CM008324.1
chromosome length 46505145
location 9432604 ~ 9440914 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007256099.3
TGCTGGTGGGATCGCTGAGCTGAACTGAAGGGAGAGGCTCTGCTTCTTCTCctcagaaaacaaacatggcgTCCACCAGCAGTCGTGAATGGAGGGCGGTGTGCGAGAAATTCGGGCGGGCGAACCACCTTTCCGAGGTGGAGTCCAGAAAAGATCCGGAGAACGACCCGTTCCGCTCCAAATACGAAGCCCGGGAGCTGTTAAAAGACATTTACTGCGCGCTGAAGAGCGTGGAGGCGGAGGAGAGCGACGGCGAGGCGGACGGGCAGGGCGAGCAGAGCGGCTCCGAGGAGGCGGAGTGTGGAGCCGGGAGATCCGTGCCGGGAGACTCGCGGGCCGGCCTCAGAGCCGCCAAGCTCGCGGTCATCGAGTACTACCTGGGCGTGAACCACACCGAGACCGAGGAGCTCTCAGCCGGTGAGGAGCATCTGATGAACTGCATGAAGCTGCTGGAGAAATGCACAGTGACCCCGGAGAACGTGTCTCTGTTCATCCAGGCCAGGAACCAGCTTGGGATCTTGTGGGCTGGAAGAGATGAAACTGAGAAAGCTCAAGGATTCTTGGAAACAGCAGAATCCATTTATGTAAACTACATGAAAGAGGATGGTCAGCCACCAGTAGATTTGATGGATTTCTTTGTGGCAGAGGAAGATGCAACAACCCAACAGGAGAGAATGAGGAGGTTTGAAATGGCCTACACCCACACTCTTTACTACCTGGCTCAGGTTTATAAAAACCTGGATCAGTTTGAGCGTGCTGGACAGTACTGTCACAGTACTCTGCAGAGACAGCTGAAGTTTAACCAGTTTGTGCCACTTGAATGGGCCATTAATGCCGCTACACTGTCACAGTACTACATCACCAAGACGCGCTACATGGAGGCACGACACTGCTTGGCTGCAGCGAGTGTTATTGCTGGCCTGGCTGGAGAAGTCCCTTCAGAGGCTGCTGCCAAAGAAAGTCAAACTGAGTATGAAAAACGTGAGCAGCTGCGCCAGAAGAGAGCTGAAATTGCCAGATGCTGGATCAAATATTGCCTTAACCTGTTACAAGATGCCAGAAAGCTTTTAGAGGACAACATTGGAGATCTAGATCTAGATCGACAGGAGGAGCTGCTGAGAGCTCGCcaagatgaggaggaggagaaagagagagagaaaaagagcgcCGTTCTTTTCGATTCCTGTGACACCTTCGACTCCATTTGCAGCCTGGAAGAGAAGGTGAGCTGTGCGTTTCCGCTGACCTTCGAAGAAGCCCGTGCCATCTTCCTGGTGGGCCAGACCTACGTGGGCCAGGCTAAGGAGTATTTTGAAATGGACGGTCATGTGACGGATCATATTGAGATCATTCAGGACCACAGCGCTCTCTTCAAAGTGCTGGCCTTCTTCGAGGAGGATCTGGAGCGCCGCTGTAAGATGCACAAGCGCCGGGTCGACATGCTGGAGCCCATCTGCAAAGATCTGAACGCTCAGTACTACCTGCTCATCTGCCGACAGCTGCAGTTCGAACTCGCCGAGACCTTCTATGAGATGATGAGCCTGAAGCTGGCAGTGGCTGAAAAGCAGGACCAGCCTGACACTCACATCATAAAGAAGTTCAACCTCTTGTGCACCTCGTCCATCAAGTACTACGAGATGTTCCTGGACTCGCTCCGTTCACCAGAAGGCAAATTCCCTGAGGTGCTGGAGGACGACGTGCTGAGACCAGCTCTGGTGGCCAAGTTTAGTGTTGCTCGGCTGCAGTCCAAGATCATCTCCACCAGTCTGGCTGTTCAGCTGGAGAACCTCACCCGCTCACTGGAATGCTACAACTTTATCATGCAGTATTGTATGGACCACCCAGAAGCTAAGAAGGCTGTGGAAACTGAACTGGAGCTCAGTGAAGAGATGGTGTCCCTTCTTCCATTGAAGATTAATAGAATAAAATCCAAAATGGTATCTGCCAACTCATAAGTGACCACTATTGTAATTAGAACTGCAcactaatattaaaatactaCTATTATGATTATTGTTACAAAGATGCAccttacagtatattaaagtaCTTCAATACATCAATACACACAATCTGCGTTATTCTGACAAATAATAAACATGGATATGGTTGGACTATATGGATAACTTGCTTAATCAGAACACTTATCCAGAACTAATATTTATATCATGCTGTGAGTTTTATATCAGTGCAGTTCTGAAGTTATAAAAGACTCTCTATGCTGcttgacataaaaataaaccccTCACCCCAATCTGATGCATCATTAACACAGAAGAGATCAGCCCATCTGACCCTGACCACCATCTCTATACCCCAAGCCCCGCCTCACTCACTGCTTCCTGTGTACACCTGGGACCAGATTAAATCTGAGAGACTTTCGCTTTACCGTCAACAGTTTCCTCTTATCTGCATGATTCTCATATGACTAATTTATTAAGTAAATGCCTTGTCGTGTACATGTTTACGTTGTCTCAATTAGGGGCTTTAAATAcgatgtaatgtaaatgtattttgtccccaaataaaacatttcttttactttaa

Function

NR:

description
PREDICTED: KIF1-binding protein

GO:

id name namespace
GO:0048484 enteric nervous system development biological_process
GO:0021952 central nervous system projection neuron axonogenesis biological_process
GO:0000226 microtubule cytoskeleton organization biological_process
GO:0048929 efferent axon development in posterior lateral line nerve biological_process
GO:0006839 mitochondrial transport biological_process
GO:0005856 cytoskeleton cellular_component
GO:0005739 mitochondrion cellular_component

KEGG:

id description
K23845 KIFBP; KIF-binding protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007256099.3 True 2547 mRNA 0.49 7 9432604 9440914

Neighbor

gene id symbol gene type direction distance location
LOC103044072 LOC108443735,LOC108263510 coding upstream 138962 9263639 ~ 9293642 (+)
LOC103042822 si:ch211-120p12.3,LOC108434955,LOC108263591,LOC103372805,LOC107375814,LOC107676554,LOC107666507,LOC107552954 coding upstream 492059 8920468 ~ 8940545 (+)
LOC103040587 rgs17,LOC103040587,LOC108262465,LOC108434957,LOC107725462,LOC107552952 coding upstream 571171 8831245 ~ 8861433 (+)
phactr2 phactr2 coding upstream 782835 8540965 ~ 8649769 (+)
cog2 cog2,LOC107601846,LOC107725477,LOC107552949,LOC107666500,LOC107743537 coding upstream 902156 8514358 ~ 8530448 (+)
srgn srgn coding downstream 20416 9461330 ~ 9466106 (+)
vps26a vps26a,LOC107666532 coding downstream 28170 9469084 ~ 9480545 (+)
supv3l1 supv3l1,LOC107725491,LOC106612443,LOC107601833,LOC107666535 coding downstream 42684 9483598 ~ 9494529 (+)
LOC103047009 hkdc1,LOC103047009,LOC106612435,LOC107676583 coding downstream 55920 9496834 ~ 9515939 (+)
hk1 hk1,LOC107676584 coding downstream 83905 9524819 ~ 9542971 (+)
G215039 NA non-coding upstream 122431 9288076 ~ 9310173 (+)
G215011 NA non-coding upstream 362737 9068995 ~ 9069867 (+)
G214990 NA non-coding upstream 446489 8981914 ~ 8986115 (+)
G214988 NA non-coding upstream 452196 8979328 ~ 8980408 (+)
G214986 NA non-coding upstream 453824 8978409 ~ 8978780 (+)
G215094 NA non-coding downstream 25706 9466620 ~ 9468399 (+)
G215102 NA non-coding downstream 40401 9481315 ~ 9481538 (+)
G215103 NA non-coding downstream 40758 9481672 ~ 9482581 (+)
G215197 NA non-coding downstream 254003 9694917 ~ 9695273 (+)
G215199 NA non-coding downstream 319374 9760288 ~ 9762248 (+)
LOC103041196 LOC108443732,LOC107582026,LOC107601840 other upstream 402006 8958299 ~ 9030598 (+)
G214773 NA other upstream 1321279 8110948 ~ 8111325 (+)
LOC103021346 LOC108412479 other upstream 1555486 7856162 ~ 7877118 (+)
pold4 NA other upstream 1619568 7810978 ~ 7813036 (+)
LOC111196031 NA other upstream 3023536 6399076 ~ 6409068 (+)
sprn sprn other downstream 1134581 10575495 ~ 10583088 (+)
G215513 polr1b other downstream 1506165 10947079 ~ 10948287 (+)
cpeb3 cpeb3,LOC106604870 other downstream 1684786 11125700 ~ 11195423 (+)
LOC111195936 NA other downstream 2169404 11610318 ~ 11613123 (+)
G215834 NA other downstream 2764587 12205501 ~ 12206164 (+)

Expression


Co-expression Network