c25h6orf203 (cunh6orf203,LOC103046561)


Basic Information

Item Value
gene id c25h6orf203
gene name cunh6orf203,LOC103046561
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035921.1
NCBI id CM008324.1
chromosome length 46505145
location 38257503 ~ 38265513 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_015605388.2
AAGTTTTGTGCAGTTCAGTACTCCGGCCAGTAGTTGGCGGTGGGATTATTCTGCCTGTCCGCTGCCTACCCTTTTATTCACTTTTCAACGCTGTGATAGAGcttatttaaatacagtttattaaatatttaaacctCTACATTATCAGTTCTGCGGGCTTTATGAGGAGATATTCAGTGTTATTTGAGTGACTGAAGGATTTGTGAGCGGCGTGCTTGGCGCTGGGCTGTGAAGGAGACTGGAACTGGagctgAGGTGATGCAGAGTCTGTCAGTGCAGGCGCTGACCCTGCGGCAGCTGGGACGCCTTAACTCCCTCCAGCTGTTGTCGCCGTGGGGCCCACGGACATTACACGCCCGCCAGCTGTGGGGAACGGTGGACTCGTTGGCCCAGCGCTCGGCACCGCTGACCAAGCCCTGGGTCAGCCCACAGGCTTGGACGTTCCAGCAGACGCGGCTCAAAGGCTCCAGAAAGAAAGGTCGATTCAATCAGGTgccagaggaagaggaggatgaagatgaCAAGGACAAAGAGGACAGTGACTACGAAGATGAACTGCAGGATGACCCTGGACTGCCTAAAGACTACAAAGACCATGAGAAAGTAGTTCAGTCCTTCCGGTTTGACCTTATTATGAAGGCTGGGCTTGACATATCTAGACATAAGATTGAAGACGCTTTCTATGACAACAAGCTGAGGTTGAACGGACAGAAGCTCATAAAGAAGAATAGAACTGTAAAAGTGGGAGATACACTGGACCTGATCATGGAAGAGGATAAAGAGCAGGACACAGTCCTACTGAAGAGAACTATTCTGAAGAAAATTCTGGGAGAAACTAAAGACGGGGACAAACAGAGGATTATAATGAGAAGCTGGAAGCACCTTCAGCTTCCCAGACAGGACTTCAAGAAGTCGGAATAAAGACAAGTGAACTACATTTTGGGTTGTGATGATATAGTGAAGATTTGGATTCTTTTACCTCAACTTTAAGTAGGAAAGGTCATTTTTaccagcagtgtttttttttttttgtttttttttcttagcttACTGTCCCCACAGCTCTCAGACAGTCTGACAGAACAAACTGTAGGCTAATATGGAATATTATGCTGAAATAAGTGTGGATAATATGGAGAAAATGTGTTCGTTTTATAGTACTAGAAGACATTATCATGATACATGTCGCACAAActgtatattgtaatttatGAAATTGGCATattataatgaattaaatatagTAATATTGCTCACCTCTTCACTTAGAAAATAAAGATACTGTACTTCAACTAATTTTTCTTCAAA
>XM_022685075.1
AGGTGATGCAGAGTCTGTCAGTGCAGGCGCTGACCCTGCGGCAGCTGGGACGCCTTAACTCCCTCCAGCTGTTGTCGCCGTGGGGCCCACGGACATTACACGCCCGCCAGCTGTGGGGAACGGTGGACTCGTTGGCCCAGCGCTCGGCACCGCTGACCAAGCCCTGGGTCAGCCCACAGGCTTGGACGTTCCAGCAGACGCGGCTCAAAGGCTCCAGAAAGAAAGGTCGATTCAATCAGGTgccagaggaagaggaggatgaagatgaCAAGGACAAAGAGGACAGTGACTACGAAGATGAACTGCAGGATGACCCTGGACTGCCTAAAGACTACAAAGACCATGAGAAAGTAGTTCAGTCCTTCCGGTTTGACCTTATTATGAAGGCTGGGCTTGACATATCTAGACATAAGATTGAAGACGCTTTCTATGACAACAAGCTGAGGTTGAACGGACAGAAGCTCATAAAGAAGAATAGAACTGTAAAAGTGGGAGATACACTGGACCTGATCATGGAAGAGGATAAAGAGCAGGACACAGTCCTACTGAAGAGAACTATTCTGAAGAAAATTCTGGGAGAAACTAAAGACGGGGACAAACAGAGGATTATAATGAGAAGCTGGAAGCACCTTCAGCTTCCCAGACAGGACTTCAAGAAGTCGGAATAAAGACAAGTGAACTACATTTTGGGTTGTGATGATATAGTGAAGATTTGGATTCTTTTACCTCAACTTTAAGTAGGAAAGGTCATTTTTaccagcagtgtttttttttttttgtttttttttcttagcttACTGTCCCCACAGCTCTCAGACAGTCTGACAGAACAAACTGTAGGCTAATATGGAATATTATGCTGAAATAAGTGTGGATAATATGGAGAAAATGTGTTCGTTTTATAGTACTAGAAGACATTATCATGATACATGTCGCACAAActgtatattgtaatttatGAAATTGGCATattataatgaattaaatatagTAATATTGCTCACCTCTTCACTTAGAAAATAAAGATACTGTACTTCAACTAATTTTTCTTCAAATCTGGACCTAGGCCAATTACTcaaaccactcattaggactccccctatcactagtgatgccccaacaccaggagggtgaagactagcacaggtctcctccaatacatgtgaagtcggactctgcctcttttcaaactccTGCTGATGCAAAAATCTGACTACTATGTACTTTCTGTCTGTTCAGATTTTCAAAAAACAATCAgaatacaatctagatatggcAAAAACATATTTATGCTGGTAGTCTGAACTAGTGTTGCATGAtattgaggggaaaaaaaactgacattgtgATGTTTTGCTGCTATGCAATATATAAAATgcgatattaaaatatatatatattaaatttcaA

Function

NR:

description
uncharacterized protein C6orf203 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_015605388.2 False 1308 mRNA 0.44 4 38257503 38265158
XM_022685075.1 True 1410 mRNA 0.42 3 38260842 38265513

Neighbor

gene id symbol gene type direction distance location
rdh14 rdh14,rdh14a,LOC107757127,LOC107585474,LOC107675576,LOC107668816,LOC106607934 coding upstream 182388 38072267 ~ 38075115 (+)
LOC111195988 NA coding upstream 388230 37866795 ~ 37869273 (+)
osr1 LOC108440809,LOC107588719,LOC107668777,LOC107757107,LOC107548611 coding upstream 602002 37646712 ~ 37655501 (+)
hif1a NA coding upstream 1113834 37099398 ~ 37143669 (+)
prkch prkcha,prkch,LOC107675581,LOC107757130,LOC107707065,LOC107087558,LOC106909499 coding upstream 1175879 37023337 ~ 37081624 (+)
sobp sobp coding downstream 94097 38359610 ~ 38425069 (+)
LOC103043501 pqlc3,LOC107706924,LOC107675554,LOC107681540,LOC107757120 coding downstream 171056 38436569 ~ 38444698 (+)
arg2 arg2,LOC107675544 coding downstream 383072 38648585 ~ 38658342 (+)
LOC103041043 rdh11,LOC108439707,LOC107585486,LOC107724212,LOC107588583,LOC107705384,LOC105896832 coding downstream 414116 38679629 ~ 38688615 (+)
golga5 golga5 coding downstream 595100 38860613 ~ 38872144 (+)
G222294 NA non-coding upstream 58541 38197603 ~ 38198962 (+)
G222284 NA non-coding upstream 105364 38151599 ~ 38152139 (+)
G222283 NA non-coding upstream 111766 38145430 ~ 38145737 (+)
G222280 NA non-coding upstream 169903 38087304 ~ 38087600 (+)
G222265 NA non-coding upstream 231641 38025493 ~ 38025862 (+)
G222355 NA non-coding downstream 151600 38417113 ~ 38434387 (+)
G222362 NA non-coding downstream 182689 38448202 ~ 38448460 (+)
G222373 NA non-coding downstream 254423 38519936 ~ 38520856 (+)
G222411 NA non-coding downstream 396831 38662344 ~ 38663701 (+)
G222412 vti1b non-coding downstream 401929 38667442 ~ 38675020 (+)
slc38a6 NA other upstream 1238201 37001085 ~ 37019302 (+)
mnat1 mnat1 other upstream 1266019 36976406 ~ 36991484 (+)
G221878 NA other upstream 1848462 36403148 ~ 36409041 (+)
G221737 NA other upstream 2200813 36052516 ~ 36056690 (+)
G221728 fbxo9 other upstream 2285149 35969989 ~ 35972354 (+)
LOC103040744 LOC103040744,LOC108439706,LOC108263332 other downstream 470426 38735939 ~ 38744184 (+)
oip5 NA other downstream 629360 38894873 ~ 38898833 (+)
LOC103047486 LOC108443507 other downstream 932194 39197707 ~ 39271138 (+)
G222694 ppp2r5e,LOC102786035 other downstream 1412989 39678502 ~ 39714015 (+)
zfyve21 zfyve21 other downstream 2065560 40331073 ~ 40339652 (+)

Expression


Co-expression Network