LOC103046402


Basic Information

Item Value
gene id LOC103046402
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035921.1
NCBI id CM008324.1
chromosome length 46505145
location 24591088 ~ 24597515 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022684456.1
TTTCTCTGCATGTGTTAACAGAAAGAACCAATGGATTTGCTAACAAGACGCCTTACCCAACTAAGAATGTCTTTGCAGCCTGTAGCTGGTAAAATGGCTTTTGCGTGGAATGCTTACTCTAAACCCTGTCCATCAGATGCTCGTGAGATGCTCCTTCTCATTCTCCTCTGTGTCCTCGTCTCCTCGGTCATCTCGTCTCTGCTGTTTGCTTGGATGACATCAAGCTTGGCCTATGACCTCTTTGTCGCAGGGATTGTTGCTGGCACATGTGCATGTGTGATGTTAGTGCTTCTGATCCTGGTGCACCCAGTGCGCTGTGTGATTACAGTGACCGTGCCTGCATTGGGCACCAAACAGGGCCGCAAGATCATCCTGTCCACTGCGCTGCTGTACGCCATCACCTCCTGCGTCCCCAACATCACCCACAACGTAGGCCAAAGCCTTCACATGCTGAAATGCAGCACAGGGAACATCACCCAAAGCGTGTTAAAGTCTGCTTGCGTGCCCAATGGAGCTCTGTATgacattaacaataaactacATGAATTGCCCTCCATTCAGTCAAACAGCTACTGGATACATCTTGAGAGTGGCACATATGACAAAATGCAGGCCATGGAGAGGGACCTTGCTGAAGCATCTGAGAACGTGAGAGTCGAGCTAGCACAGCTACGCAGAAACATAGGCCAGACCTCCCAAGTTCTCAAAAAGTCCATCGCTGCACTGTTCGTGCTTTTAATGATCGGCAGTTCAGTGGCCTACGTAAACAGCTACCTGACCCAAATTAAGCATGATAATGTGTACCAGTCAAAGCAGCTGATGGAAGCTCTGCAGCGAGTGAGCGGCGATATCACGATCCCTGAGTGTTACCAGAAGAAACTAGTGAAGACATCTGGGTTGAGGATGAGCGCCCATGAGCTGAAGCGTGGCCTCTGGGGGATGATGGCCCTGCTAATCTACGTTCTGATGTGTGGGCTCATACTGGGCCTAGACCACTTTGTTTACTGGTCCCTGCAGTCTCTACTGGCATGGGCCTCAGACATCCCTGACATACATGCTACTGTGAAAATTGACATGTCTaTAAAGGCAACATATCTTGATTTGTTTCCTCATTATATTAGTGGCCTGAGTAAGAGATATCCCTACACTGTACAGATGATGCCTCCAGGGTGTGTTAACTCTCTCTCCGCACCAGATCACGCCACTCTGACCTCAGTCTGTGCGTTTCTGGCTACTGGTTTCTTGATGGTGCTGGGGGAGGTTTTTGCTCGTCGCCTGCGACGCAAAGTCTGCGCATCATTTTACCGCAGCCGTGAGGAGCATCGTACTCAGTGCCTCCTGCTGAAGAttctaaataaaagaaagagaccAGAGGGACAGGATGACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022684456.1 True 1389 mRNA 0.50 3 24591088 24597515

Neighbor

gene id symbol gene type direction distance location
LOC111195941 NA coding upstream 5623 24580100 ~ 24585465 (+)
LOC103043568 htra2,LOC107690150,LOC108263241,LOC106589831,LOC104960364,LOC103358855 coding upstream 60896 24522811 ~ 24530192 (+)
mrps26 mrps26 coding upstream 70134 24517414 ~ 24520954 (+)
LOC103042321 LOC103042321,LOC108441753 coding upstream 75266 24511341 ~ 24515822 (+)
LOC103040903 NA coding upstream 83785 24495653 ~ 24507303 (+)
LOC103044475 rab11fip5,LOC108263817 coding downstream 1090 24598605 ~ 24657648 (+)
LOC103045503 sfxn5,sfxn5a,LOC108262907 coding downstream 60916 24658431 ~ 24678113 (+)
cdc25b cdc25b,LOC108417292 coding downstream 182094 24779609 ~ 24787340 (+)
ap5s1 ap5s1 coding downstream 197375 24794890 ~ 24798599 (+)
rrh rrh,LOC107666394,LOC107585226,LOC107733708 coding downstream 587119 25184634 ~ 25192379 (+)
G218920 NA non-coding upstream 20356 24567317 ~ 24570732 (+)
G218893 NA non-coding upstream 111866 24474824 ~ 24479222 (+)
G218853 pomk non-coding upstream 129779 24459393 ~ 24461309 (+)
G218842 NA non-coding upstream 269496 24318267 ~ 24321592 (+)
G218841 NA non-coding upstream 272894 24317642 ~ 24318194 (+)
LOC111196006 NA non-coding downstream 192562 24790077 ~ 24792821 (+)
G219067 NA non-coding downstream 349209 24946724 ~ 24947071 (+)
G219069 NA non-coding downstream 411626 25009141 ~ 25009529 (+)
G219074 NA non-coding downstream 443722 25041237 ~ 25041789 (+)
G219102 NA non-coding downstream 486942 25084457 ~ 25084856 (+)
LOC103046104 LOC108441759 other upstream 124221 24443291 ~ 24466867 (+)
fam213a fam213a,fam213aa,LOC107690162,LOC107733773,LOC107582522 other upstream 519462 24064495 ~ 24071626 (+)
G218758 NA other upstream 527300 24059211 ~ 24063788 (+)
LOC103041715 zgc:154058,LOC103041715,LOC108441772,LOC107733751,LOC107690163,LOC107570530,LOC107582519,LOC103387327,LOC107708463,LOC108263524 other upstream 562107 23981135 ~ 24028981 (+)
G218651 NA other upstream 882845 23696577 ~ 23708243 (+)
G219050 NA other downstream 244787 24842302 ~ 24842533 (+)
dapp1 dapp1,LOC107579178,LOC107556904,LOC107667071,LOC107585227,LOC107733757 other downstream 564212 25161727 ~ 25174708 (+)
G219171 cunh4orf32,c3h4orf32 other downstream 659435 25256950 ~ 25302587 (+)
LOC103047652 NA other downstream 841204 25438719 ~ 25442581 (+)
LOC111196018 NA other downstream 2602937 27200452 ~ 27236616 (+)

Expression


Co-expression Network