mb21d1


Basic Information

Item Value
gene id mb21d1
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035921.1
NCBI id CM008324.1
chromosome length 46505145
location 16110265 ~ 16116490 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022684691.1
AGGGAAAGCCCAGGCTGGGTTAGCCTCTTCTGACGTCAAGAAGCTTTATAAGCGCTCGGCGGGAGAACCAAGGTCCTTTTACGCACAATGAGTGGAAGAAGCAGACCAAAGAGCACAGAGGAGACTCCAGGCAAGACTCGGGGAGCCACAGGTCCGGGGTCCACTCGGAGGAAACCCTCTGGGAAGGGCGAGGAGAAGAGAGATGGAAGCTCAAAAGCTGCAGCACCACCAATGGATAGGGATAAGGACAGGGACAGGGCAGGAGGCAGAGGGGGACGCACCGCGACGGTTCCCCGGGGCGCGCCCAGCCCCACTCCCGCCAAAACTCCGCTCAACAGCAAGCCTCCCCCAGCAGCCGCCCCGCGAACAGCAGCGAGAGGTGCAGAAGACAAGAATACTCCCAGAAACCCACCCAGCAGTACCACCAGCATCGACTACAACCCGGACAGGGTCCTCCGAGACACTCTCGAAAAGTTAAAAATCAAGAAAACCGAGAGAAACGAGGCAACGAGGTGCGTAAACGAGATCCAGAAGGAAATCGCCAAACACCTGAAAGAGAGTTTAGACTGGTGCAAAGAAATCCAGGAGCTCAAGACCGGGAGCCACGTCGAAAACGTTAAAATCTGCGAGTCTGATGAGTTCGATGTAATGCTGGTCATTTCTGTGGACAGAGTGGACATCCAACCTTTTAGAGGGGACGGTGCCTTCTACAGTGTGGCACTGAAGCGCAACTCGTGTAAATCTTTGGACAAATTTCTCAACAAAGACAAAATCATCGAGGCCAGTGAAATGCTCACAGAGTTCCGGAAGAAAGTGAAGGAATGTGTGCCCAAGCTGACTTCCAAATataACATTACAGTGGAGGGTAAAAAGCCAGGCTGTCCCGCTGTGACCCTGCAGGTGAAGGGAAAGGACGGCAGGATCATCTCTTTGGACTTTGTGCTGGGGCTGGAGGTGCACAGCTCAAGCTGGCCAGCCATCACAAAGGATGGGTTCAAGATCGACAACTGGCttggcaaaaaagtaaaaacagatCTAAAGCGCAAGCCCTTTTATTTGGTGCCCAAATATGAGGGCAAAGGAACCACAGAGTGCGATGGTGTTAAAGCTAAAGACGCATGGCGCATCTCCTTTTCACATGTGGAGAAAGAAGTCCTGAAAAACCACGGCCAGTCCAAGACCTGCTGCGAGGGCCGGCCCAGTTGCTGCAGGAAGCAGTGTCTGAAGCTTCTGAAGTATCTGGTGCGGGGGCTGAAGGAGCATCACCCAAAGGAGGCAGGCAAACTATGCTCCTACCATGCCAAGACCACACTGCTCCATGCCTGCGCAGAACGGGGGGGAGATAGCGAGTGGGAAATCAGTCAGCTCAGTCACTGCTTCCAGCAGGTCCTCTCTGACTTTGaaaattatttaagaaaacagGATTTGCCCAACTTCTTTATCCCCTCACATAATCTACTGAAGTCAGCAGGCCTGGACAAGAAAACCTGTAACTTCCTGGCAGACGAAATCGAGTTCCAGCGAAACAATTGTTTTCCTGTGTTCCGCTGAGCTGTTTTGTTACTATTTGTTTGTAAAACACTTATTAGaaattttgcatgtttttgcatttatttaaaataaaatattcaaacttg

Function

GO: NA

KEGG:

id description
K17834 MB21D1; cyclic GMP-AMP synthase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022684691.1 True 1637 mRNA 0.51 5 16110265 16116490

Neighbor

gene id symbol gene type direction distance location
LOC103021740 LOC108442579,LOC108263602,LOC108258313,LOC108441988,LOC105023253,LOC107716315,LOC107693767 coding upstream 1699 16103228 ~ 16108566 (+)
LOC103022067 slc17a5,LOC107673875,LOC107585335 coding upstream 8346 16089846 ~ 16101919 (+)
rin2 LOC108442550,LOC107673857 coding upstream 23301 16024820 ~ 16086964 (+)
LOC103022884 NA coding upstream 87426 16017400 ~ 16022839 (+)
slc24a3 slc24a3,LOC107693448,LOC107718828,LOC107716313,LOC107673935 coding upstream 94590 15894605 ~ 16015675 (+)
LOC103032358 asrgl1,LOC103032358,LOC105911569,LOC107695955,LOC107585330,LOC108442615,LOC107673965 coding downstream 323107 16439597 ~ 16452704 (+)
b3gat2 b3gat2 coding downstream 407627 16524117 ~ 16551646 (+)
LOC103035008 slc2a15a,LOC103035008,LOC108442702,LOC107716293,LOC107673883,LOC108262874,LOC107585370,LOC107708408,LOC107696166 coding downstream 736214 16852704 ~ 16879760 (+)
fgf8_1 fgf8,fgf8a,LOC107673879,LOC107716294,LOC107696243,LOC108442712,LOC107585369 coding downstream 800211 16916701 ~ 16922940 (+)
fbxw4 fbxw4,LOC107716323,LOC107707737,LOC107694796,LOC107673945,LOC107588663 coding downstream 814608 16931098 ~ 16967406 (+)
G216893 NA non-coding upstream 824 16108729 ~ 16109441 (+)
G216831 NA non-coding upstream 186954 15914931 ~ 15923311 (+)
G216793 NA non-coding upstream 440529 15669518 ~ 15669736 (+)
LOC111195977 NA non-coding upstream 1186987 14911999 ~ 14923278 (+)
LOC111195976 NA non-coding upstream 1198278 14892201 ~ 14911987 (+)
G216894 ddx43,LOC107693529,LOC107588708,LOC105911636 non-coding downstream 1369 16117859 ~ 16128583 (+)
G216910 NA non-coding downstream 138998 16255488 ~ 16323301 (+)
LOC103031925 NA non-coding downstream 338847 16455337 ~ 16469869 (+)
G216953 NA non-coding downstream 369412 16485902 ~ 16487538 (+)
G216941 smap1,LOC107588664,LOC107694205,LOC107585328 non-coding downstream 444362 16560852 ~ 16719481 (+)
bcl11a bcl11a,bcl11aa,LOC107666449,LOC107601892,LOC107743494,LOC107655449,LOC107559339 other upstream 1329952 14722400 ~ 14780313 (+)
gsto1 gsto1 other upstream 1762932 14342232 ~ 14347333 (+)
spef1 spef1 other upstream 2359959 13740513 ~ 13750306 (+)
LOC103033819 LOC108426824,LOC108263419,LOC107725444 other upstream 2625894 13479176 ~ 13484371 (+)
trnay-gua_11 NA other upstream 2794103 13316075 ~ 13316162 (+)
borcs7 borcs7 other downstream 888051 17004541 ~ 17007537 (+)
LOC111195981 tacc2 other downstream 1032852 17149342 ~ 17184251 (+)
pax2 pax2,pax2a,LOC107668824,LOC101463634,LOC107588637,LOC107716343,LOC107585307 other downstream 1887763 18004253 ~ 18039352 (+)
eif4ebp2 eif4ebp2,LOC107564345,LOC107716353,LOC107668794,LOC107673927 other downstream 2195403 18311893 ~ 18317228 (+)
LOC103030769 LOC103030769 other downstream 2626716 18743206 ~ 18744327 (+)

Expression


Co-expression Network