map3k9 (map3k9,LOC107705427,LOC107654958,LOC107602953,LOC107553203)


Basic Information

Item Value
gene id map3k9
gene name map3k9,LOC107705427,LOC107654958,LOC107602953,LOC107553203
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035921.1
NCBI id CM008324.1
chromosome length 46505145
location 35324800 ~ 35348312 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022684768.1
ATTAGATTGCAGATCGCTGGTCGAGCTCCGCCTTTCAagtgcaacacacacacgcgcgcacacactcCAGCACTTTGCATCGCTTTGCAGTGCGCGTGCGCGTGCAGGTCGACACCGAAGGTGCTGCACGTTCAGCACACAGCGCGAGCCTCTGCGGCCTCTGCGGCACGGGGCCGCGCGGGCCCGGTAGGGGTAGCAGCTGGAGCCGGTTTGCCCCCTCGCGCCCCCGACCCGCATGGATTTACCCCATGGATGACTCGGACGGCGCGGAGGCCGAGCGCGCGCCCCCGCGCGTGCCCGTGGCGACCGGGGCTGGCGGCTGGGGGACGGACGGGACCGGGGGGGAGTTTCCCGGCAGGTACGTCATCGCGGAACCGAGCACGGCGCAcgaggaggaggaagatgaagaagaggatgaggaggacGAGGCGCGCGGGCGCGGGGCGCAGCTGCACGTGTTGGAGATAGACTTCAgtgagctgctgctggaggagctgATAGGAGTGGGCGGGTTTGGTAAGGTGTACCGGGCGGTGTGGAGAGGGCTGGAGGTGGCGGTGAAGGCAGCACGGCGTGACCTGGACGAGGACGCGTGTGAGACCCTGCAGAACGTGCGACAGGAGGCCAGGCTCTTCTCCATGCTGAGACATCCCAACATCATGGCCCTGCTGGGGGTGTGTGTGCAGGAGCCCAACCTGTGCCTGGTGATGGAGTACGCCCGGGGAGGAGCGTTGAATCGCGCACTTGCTGGAAAACGTATCCCCCCGCACACGCTGGTGGACTGGGCCGTGCAGATCGCCAGAGCCATGCAGTACCTGCACTGCCAGGCCATCGTCCCCATCATACACAGAGACCTGAAGTCCAGCAACATCCTGATCCTGGAGCGCGTAGAGAACGAGGATCTGAGCAATAAAACCCTGAAGATCACAGATTTCGGGTTGGCGCGAGAGTGGCACCGCACCACTAAGATGAGCGCGGCGGGCACTTACGCCTGGATGGCACCCGAGGTCATCCGCTCCTCTACTTTCTCCAAGGGCAGCGACGTCTGGAGttATGGAGTGTTGCTGTGGGAGCTGTTGACAGGCGAGGTGCCGTTTCGTGGTATTGATGGACTCGCTGTGGCGTACGGAGTTGCCATGAATAAACTGGCACTGCCCATCCCCTCCACCTGCCCTGAACCTTTCACACGCCTAATGGAAGCCTGTTGGAGTTCTGACCCGCACGGCCGGCCACCCTTCTCCACCATCCTAGACCTGCTCACCTCTATTGAGGAGTCTGGATTTTTTGAGATGCCTGCTGAGTCCTTCCACTCGCTGCAGGACGACTGGAAGCTGGAGATACAGGAGATGTTTGATCAGCTGAGAGCCAAAGAAAAGgagtTGAGGTCGTGGGAGGAGGAGTTAACACGGGCTGCACTGCAACAGAAGTACCAGCAGGAGGCGCTACGGCGGCGTGAGCAGGAGCTGGCAGAGCGAGAGATCCACATCCTGGAGCGGGAACTTAATGTCATAATCCAGCAGCTTTATCATGAAAAGCCCCGCGCCGAGCAGCGCCACGGCATGTTCCGCCGCAGCCGCATCAAGCTGCGCCCTGGAGACCGCATCAGCCTGCCGTCCGGTACGACCCCCATCACTTCACACCTATTCACAGGGCCAGCATTAGCTTTTTgtctggacctTGTaatgaacaatccatgtgtgaaaatgatgctcatgctccctgaaccactctttcagaAACTGAGCCCCATCATtccctctctatctatctatctctctctatctttttctgtAGAAAATGAAGACTGCTGCTGTCCGTCTGACCTCCCAGAGTCTCCCGGTCAGTCATATCTCTGCATCCCCTTCCACAGAGAGGGCTCAGTTTCGGAAGGTTATGGTTCTGAAAGCACCGTGATTGGTCAAGGCCTTGACTCCTCCCCCAGTTTTTCAAGGCGGAGCCCTAGTGGAGGTCGGAGGTCAGATCTGATGCTGCTGGGGTGCGGGGCTTTGCTGGCCGCTGTGGGTCTGGGTTTCAATCTCCTGGATTCTGGGAGGCTGGAAGAAAGCACACGTCCAAAATGGGAGGGGCTTTTCCAGAAGGTTAGTGGTGGCCAGAGGAGAAGCTCCAGCCCCCCCACAAGAAAACTGTTTAAACGGGATAGCCCCCTGCGGCCCCCACCGCTGCCCCCCTCCCTCAcactcctttctctctcctccgTTTCGGACTGTAACTCAACACGTTCTCTACTTCGCTCGGACAGtgaggagctgctggtgctccGCCCTCCTACACCTCCTTCAGTGATGCCCCGCCCACTCTCACCTCCccaactgctgataaggcatcCACCTGCCAACCCTCTTGTCAACACTCACATAGAGAGTTTTAAGCGCAACCCTCGCCAATCGCTCACGCCCACACATGCCCCTGCAGCGCCCAGCGCCACCCGCAAGCTGCACCGCACGCCATCCGATGGAGCCATAAAGAAGGGCGGAGCAATGAACAACATCATACAGAACAACGCCCAGCCATCTCTTCCAAAAGCTGCACAGGAGCACACAGTGAATCCATGGGCAGTGAGAGATGACCCCTCAGAAGTACCTCGTCTTCCTGACCCAAACCTCATCTTTCCTCCCACGCCACGCCGCCGCTGCCAGCCAGAGCGCCCCAAAACTCTGGACTTCTTAGCTAGGCCACGCCCCTCACCCCGAGCTCGCTGCGAAAGCCAGTGGGGGGACTCTCCCGCTCGCACATCCAGCACTGAAACTCCTCCCACTGTGGAGTTTGATGGGGGTGTGGTTGTAGCACCCACACCGATGGAACAGCCTACCCCGTGCTCTCCCTGGGTGAATGACAGCCTTCTGGACCAGTCGGACGAGGGCCAGTGCAGGGACAGAACTAGACCTCTTAAACTAGAACCCATATTACCCAGAGACTCGCCTTACAAAATGAGACCCGGCTTCTGGTCCTGACTTCGGTCCTTCTGTggattttaaagcagcagtttggTCG

Function

symbol description
map3k9 Predicted to enable JUN kinase kinase kinase activity. Predicted to act upstream of or within protein phosphorylation. Orthologous to human MAP3K9 (mitogen-activated protein kinase kinase kinase 9).

NR:

description
PREDICTED: mitogen-activated protein kinase kinase kinase 9 isoform X2

GO:

id name namespace
GO:0018108 peptidyl-tyrosine phosphorylation biological_process
GO:0000186 activation of MAPKK activity biological_process
GO:0005524 ATP binding molecular_function
GO:0004709 MAP kinase kinase kinase activity molecular_function
GO:0004713 protein tyrosine kinase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022684768.1 True 3012 mRNA 0.59 8 35324800 35348312

Neighbor

gene id symbol gene type direction distance location
slc8a3 slc8a3,LOC107654959,LOC107602954,LOC107705428,LOC107091425 coding upstream 15889 35234443 ~ 35308911 (+)
actn1 actn1,LOC108440922,LOC107705429,LOC107602958,LOC107654957,LOC107739883,LOC103359947,LOC108261236,LOC107680897 coding upstream 115974 35152330 ~ 35208826 (+)
dcaf5 dcaf5,LOC107681972,LOC107553205,LOC107739884,LOC107654956,LOC107705431,LOC102780996 coding upstream 190807 35115648 ~ 35133993 (+)
pacs2 pacs2 coding upstream 216559 35036632 ~ 35108241 (+)
LOC103035102 LOC103035102,LOC108411051,LOC794838,LOC107705434,LOC107654921,LOC107553207,LOC105890990,LOC107602927 coding upstream 310671 35002205 ~ 35014129 (+)
med6 med6,LOC107654960,LOC107602956 coding downstream 28425 35376737 ~ 35381446 (+)
pcnx1 pcnx1,pcnx coding downstream 37391 35385703 ~ 35456493 (+)
LOC103046445 lgmn coding downstream 114046 35462358 ~ 35485086 (+)
LOC103029802 LOC108440917 coding downstream 171100 35519412 ~ 35556136 (+)
klhl31 klhl31,LOC107664702 coding downstream 515554 35863866 ~ 35868147 (+)
G221527 NA non-coding upstream 8910 35309502 ~ 35315890 (+)
G221522 NA non-coding upstream 80849 35199650 ~ 35243951 (+)
LOC111196036 NA non-coding upstream 179878 35135879 ~ 35144922 (+)
G221517 NA non-coding upstream 270241 35053458 ~ 35054559 (+)
G221447 NA non-coding upstream 342439 34980019 ~ 34982361 (+)
G221545 NA non-coding downstream 43372 35391684 ~ 35432694 (+)
G221540 NA non-coding downstream 94901 35443213 ~ 35459370 (+)
G221551 NA non-coding downstream 208991 35557303 ~ 35727535 (+)
G221559 NA non-coding downstream 212521 35560833 ~ 35566330 (+)
G221563 NA non-coding downstream 270242 35618554 ~ 35623518 (+)
LOC103031497 NA other upstream 106422 35208431 ~ 35218378 (+)
srsf5 srsf5,srsf5a,LOC107553206,LOC107736490,LOC108411053,LOC107602962 other upstream 299202 35018442 ~ 35025598 (+)
synj2bp synj2bp,LOC108411060 other upstream 327756 34986999 ~ 34997044 (+)
G221390 ate1 other upstream 1141563 34162581 ~ 34183237 (+)
G221292 NA other upstream 1880079 33444117 ~ 33444721 (+)
gclc gclc,LOC107597697,LOC107664701,LOC107712340,LOC107688787 other downstream 521706 35870018 ~ 35888815 (+)
G221728 fbxo9 other downstream 621677 35969989 ~ 35972354 (+)
G221737 NA other downstream 704204 36052516 ~ 36056690 (+)
G221878 NA other downstream 1054836 36403148 ~ 36409041 (+)
mnat1 mnat1 other downstream 1628094 36976406 ~ 36991484 (+)

Expression


Co-expression Network