LOC103045799 (cpxm1,cpxm1a,LOC107678553,LOC107708467)


Basic Information

Item Value
gene id LOC103045799
gene name cpxm1,cpxm1a,LOC107678553,LOC107708467
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035921.1
NCBI id CM008324.1
chromosome length 46505145
location 24429672 ~ 24446638 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022684903.1
CCCCAGAGTAAAGTGGGCTCACTGCAGCAGAGTCAGTCAGTCACTATGATCGGACAGAGCCTGCTCAGCCTGCTGCTGCTCGTGCTGTGGTGCTTTGTGCACGAGTCCACATCTGCAGAGAACGCCACGCTCCAGAGTAACGGGActgacactgtgtttaataataacGGGACATTATTAGCTTTTAATAATGAAACGCGGAACGAGACCGGAGCGAAAGAGGCAGCAGAAGATCAGCGGAGGGTTCCTGAGATTCATCCGCAGAAAGAAGAGCCAAGCAAACCCGACTGTCCACCAGTGGGAATGAAGTCTCTGCGGGTGTCTGATTACCAGCTGCAGGCCTCCACATCCCTGAGTAGTGGGTTAGGCCCTCACAGAGGACGTCTTAACATACAGTCAGGTATAGAGGATGGAGATGAGTATGATGGAGCCTGGTGTGCTGGGGTGAAGGATCAACAGCAATGGCTGCAGCTGGATGCTCTCAGGCCTACACTTTTCACTGGGGTCATTCTACAGGGCAGGAACTCCATCTGGAGctgGAACTGGGTTACTAAATATAAGGTGCAGTTCAGTAACGACACGCAGACTTGGAGCCCCGCCATGAATGGATCACAAGAAGCGGTATTTGTGGGGAATCAGGACATAGAGACCCCTGTACTGGCTCTGTTCCCGGAGCCCACAGTGGCCCAGTTTATCCGAATCAACCCACAGAGCTGGTTCATCAATGGTACAATCTGCCTTAGGGCTGAAATCCTGGGCTGCCCCATGCCAGATCCCTACAACCTGTACCCCATGGAGCCTGAAAGGACTTCTACAGACAAATTAGATTTCAGACACCATAATTACAATGCGATGAGAAAGTTGCTGAAGGAAGTAAACGACAAGTGCCCTAATATCACCCGTATCTACACTATTGGAAAAAGCTACACTGGACTTAAACTGTATGTCATGGAGATTTCCGATAACCCTGGAAAACATGAACTGGGTGAGCCAGAGTTCCGTTACGTCGCCGGGATGCATGGAAATGAGGTTTTGGGTCGGGAGCTGCTGCTGAATCTTATGCAATACATCTGCCACGAGTACAGACGAGGCAACCAGCGAATAGTTCGGCTGGTGAAAAACACACGCATCCACCTCTTACCATCTATGAACCCTGATGGCTATGAGACAGCATATGAGAagggttcCGAGCTTGCTGGCTGGGCTTTGGGTCGCTACAGCTTTGAGAACATCGACATGAACCATAACTTCCCTGACCTTAACAACATCATGTGGGATGCTCAGGACCTGGCAACAGACAAGAAGAAAGTCAGCAACCACTACATTCCCATGCCAGAGTACTACACCACCACTGATGCAACCgtTGCTCCAGAGACCCGAGCCGTAATAAACTGGATGCAGGATATTCCATTCGTGCTGAGCGCTAATCTCCATGGAGGAGAGCTGGTGGTAACTTACCCGTTCGACTGCACACGAGACTGGATCCCTCGCCAGGACACGCCTACTCCTGATAATGACTTCTTTCGTTGGTTAGCAGCGGTTTACGCTTCCACCAATCTGGTCATGGCAAACCCTGATCGCAGAATCTGCCATTATGAAGACTTTCAGCAGCACAACAACATCATTAATGGAGGGGACTGGCACACTGTCCCTGGAAGTATGAATGACTTCAGCTACTTACACACAAACTGTTTCGAGGTGACTGTAGAGTTATCATGTGATAAGTTCCCTCATGCCAGTGAGCTTCCTGTTGAGTGGGAGAGTAACAAGGAGTCTCTTCTGCTCTACATGGAACAGGTGCACAGGGGTATTAAAGGTGTGATCAGGGATAAAGACACCAAAGAAGGCATCGCTAatgctgttgttaaaatagtgGGCTTGGACCATGACATCAGATCAGCTGTTGATGGTGATTACTGGCGCCTACTGAACCCAGGTGAATATAAAGTGATCGTGTGGGCGGAGGGCTACATGCCCTTTATCCGCCGCTGCACTGTGGGCTCAGATCCTCAGCCCACCATCTGCGACTTCACCCTTACCAAGACACCCCTCGAACGAATCAAGCAGATCCAGGCCAAAGGTGGGAAGCTTCCCCGGGACGAGCAGCTCCGCATCCGGGCTTTACGAATGCGTAAACTCAGGGTCAGCACCAAGATCCTGAACCGCCGCCGcgagcagcaacagcagcagcaacagcggCGCAGCAAAGCCAGAAGAAAGTGACCGGAACACTCGCACTGACCGCACAGAGAAACCAGCCAGACACTGCTTCCAGAGACAGGATGGAGAGAGGTCTACAGAGAAGTGTGTGATTAAAGAGTGACATTTTTAATTTCCATATTTCTTGAGGGACTTTAAACCTAGCCAAAAAAAGATTCTGAAGCTAGTCAAATGTTGCATACTTAGTACTGCATTAGAAACACCATCTAGTCTTCACAGTTAAATTCACCCACATCTGCTCTGCACAAATGGTTGTTCTCTGACCAGCATTTAAACACTGAATGTTTTATTGCTAAAAACTGACTCCTGTTGGAGCTCAGAAAAAATGGTGGGTGTAGCTGGTTTTCTACACTCTTAACATTTTTGTatcactaaaatgtattttatttaccacatactttaataataaataccaCTTTCTTTCAACTAAT
>XM_022684904.1
TTTATATCAcatttagatagatagACTGTCCACCAGTGGGAATGAAGTCTCTGCGGGTGTCTGATTACCAGCTGCAGGCCTCCACATCCCTGAGTAGTGGGTTAGGCCCTCACAGAGGACGTCTTAACATACAGTCAGGTATAGAGGATGGAGATGAGTATGATGGAGCCTGGTGTGCTGGGGTGAAGGATCAACAGCAATGGCTGCAGCTGGATGCTCTCAGGCCTACACTTTTCACTGGGGTCATTCTACAGGGCAGGAACTCCATCTGGAGctgGAACTGGGTTACTAAATATAAGGTGCAGTTCAGTAACGACACGCAGACTTGGAGCCCCGCCATGAATGGATCACAAGAAGCGGTATTTGTGGGGAATCAGGACATAGAGACCCCTGTACTGGCTCTGTTCCCGGAGCCCACAGTGGCCCAGTTTATCCGAATCAACCCACAGAGCTGGTTCATCAATGGTACAATCTGCCTTAGGGCTGAAATCCTGGGCTGCCCCATGCCAGATCCCTACAACCTGTACCCCATGGAGCCTGAAAGGACTTCTACAGACAAATTAGATTTCAGACACCATAATTACAATGCGATGAGAAAGTTGCTGAAGGAAGTAAACGACAAGTGCCCTAATATCACCCGTATCTACACTATTGGAAAAAGCTACACTGGACTTAAACTGTATGTCATGGAGATTTCCGATAACCCTGGAAAACATGAACTGGGTGAGCCAGAGTTCCGTTACGTCGCCGGGATGCATGGAAATGAGGTTTTGGGTCGGGAGCTGCTGCTGAATCTTATGCAATACATCTGCCACGAGTACAGACGAGGCAACCAGCGAATAGTTCGGCTGGTGAAAAACACACGCATCCACCTCTTACCATCTATGAACCCTGATGGCTATGAGACAGCATATGAGAagggttcCGAGCTTGCTGGCTGGGCTTTGGGTCGCTACAGCTTTGAGAACATCGACATGAACCATAACTTCCCTGACCTTAACAACATCATGTGGGATGCTCAGGACCTGGCAACAGACAAGAAGAAAGTCAGCAACCACTACATTCCCATGCCAGAGTACTACACCACCACTGATGCAACCgtTGCTCCAGAGACCCGAGCCGTAATAAACTGGATGCAGGATATTCCATTCGTGCTGAGCGCTAATCTCCATGGAGGAGAGCTGGTGGTAACTTACCCGTTCGACTGCACACGAGACTGGATCCCTCGCCAGGACACGCCTACTCCTGATAATGACTTCTTTCGTTGGTTAGCAGCGGTTTACGCTTCCACCAATCTGGTCATGGCAAACCCTGATCGCAGAATCTGCCATTATGAAGACTTTCAGCAGCACAACAACATCATTAATGGAGGGGACTGGCACACTGTCCCTGGAAGTATGAATGACTTCAGCTACTTACACACAAACTGTTTCGAGGTGACTGTAGAGTTATCATGTGATAAGTTCCCTCATGCCAGTGAGCTTCCTGTTGAGTGGGAGAGTAACAAGGAGTCTCTTCTGCTCTACATGGAACAGGTGCACAGGGGTATTAAAGGTGTGATCAGGGATAAAGACACCAAAGAAGGCATCGCTAatgctgttgttaaaatagtgGGCTTGGACCATGACATCAGATCAGCTGTTGATGGTGATTACTGGCGCCTACTGAACCCAGGTGAATATAAAGTGATCGTGTGGGCGGAGGGCTACATGCCCTTTATCCGCCGCTGCACTGTGGGCTCAGATCCTCAGCCCACCATCTGCGACTTCACCCTTACCAAGACACCCCTCGAACGAATCAAGCAGATCCAGGCCAAAGGTGGGAAGCTTCCCCGGGACGAGCAGCTCCGCATCCGGGCTTTACGAATGCGTAAACTCAGGGTCAGCACCAAGATCCTGAACCGCCGCCGcgagcagcaacagcagcagcaacagcggCGCAGCAAAGCCAGAAGAAAGTGACCGGAACACTCGCACTGACCGCACAGAGAAACCAGCCAGACACTGCTTCCAGAGACAGGATGGAGAGAGGTCTACAGAGAAGTGTGTGATTAAAGAGTGACATTTTTAATTTCCATATTTCTTGAGGGACTTTAAACCTAGCCAAAAAAAGATTCTGAAGCTAGTCAAATGTTGCATACTTAGTACTGCATTAGAAACACCATCTAGTCTTCACAGTTAAATTCACCCACATCTGCTCTGCACAAATGGTTGTTCTCTGACCAGCATTTAAACACTGAATGTTTTATTGCTAAAAACTGACTCCTGTTGGAGCTCAGAAAAAATGGTGGGTGTAGCTGGTTTTCTACACTCTTAACATTTTTGTatcactaaaatgtattttatttaccacatactttaataataaataccaCTTTCTTTCAACTAAT

Function

symbol description
cpxm1a Predicted to enable metallocarboxypeptidase activity. Predicted to be involved in peptide metabolic process and protein processing. Predicted to act upstream of or within proteolysis. Predicted to be active in extracellular space. Orthologous to human CPXM1 (carboxypeptidase X, M14 family member 1).
cpxm1 Predicted to enable metallocarboxypeptidase activity. Predicted to be involved in peptide metabolic process and protein processing. Predicted to be active in extracellular space.

NR:

description
PREDICTED: probable carboxypeptidase X1

GO: NA

KEGG:

id description
K08638 CPXM1; carboxypeptidase X1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022684903.1 True 2651 mRNA 0.49 13 24429672 24446638
XM_022684904.1 False 2389 mRNA 0.48 13 24430015 24446638

Neighbor

gene id symbol gene type direction distance location
pdzd7 pdzd7,LOC107690160,LOC107678494 coding upstream 298927 24092177 ~ 24130745 (+)
LOC103042015 LOC108441770 coding upstream 452080 23970690 ~ 23977592 (+)
LOC111196020 LOC105007542 coding upstream 460341 23965642 ~ 23969331 (+)
LOC111195965 LOC105007542 coding upstream 467571 23959074 ~ 23962101 (+)
LOC111196037 LOC105007542 coding upstream 475867 23950856 ~ 23953805 (+)
LOC103040903 NA coding downstream 49015 24495653 ~ 24507303 (+)
LOC103042321 LOC103042321,LOC108441753 coding downstream 64703 24511341 ~ 24515822 (+)
mrps26 mrps26 coding downstream 70776 24517414 ~ 24520954 (+)
LOC103043568 htra2,LOC107690150,LOC108263241,LOC106589831,LOC104960364,LOC103358855 coding downstream 76173 24522811 ~ 24530192 (+)
LOC111195941 NA coding downstream 133462 24580100 ~ 24585465 (+)
G218842 NA non-coding upstream 108080 24318267 ~ 24321592 (+)
G218841 NA non-coding upstream 111478 24317642 ~ 24318194 (+)
G218836 NA non-coding upstream 147616 24281705 ~ 24282056 (+)
G218799 NA non-coding upstream 292586 24134176 ~ 24137086 (+)
G218795 sfxn3,LOC103040609,LOC108263463,LOC108441766,LOC107708462,LOC107678536,LOC105911632 non-coding upstream 338119 24082939 ~ 24091553 (+)
G218853 pomk non-coding downstream 12755 24459393 ~ 24461309 (+)
G218893 NA non-coding downstream 28186 24474824 ~ 24479222 (+)
G218920 NA non-coding downstream 120679 24567317 ~ 24570732 (+)
G218948 NA non-coding downstream 142672 24589310 ~ 24641047 (+)
LOC111196006 NA non-coding downstream 343439 24790077 ~ 24792821 (+)
fam213a fam213a,fam213aa,LOC107690162,LOC107733773,LOC107582522 other upstream 358046 24064495 ~ 24071626 (+)
G218758 NA other upstream 365884 24059211 ~ 24063788 (+)
LOC103041715 zgc:154058,LOC103041715,LOC108441772,LOC107733751,LOC107690163,LOC107570530,LOC107582519,LOC103387327,LOC107708463,LOC108263524 other upstream 400691 23981135 ~ 24028981 (+)
G218651 NA other upstream 721429 23696577 ~ 23708243 (+)
kcnma1 kcnma1,LOC108263740 other upstream 1611558 22563798 ~ 22818114 (+)
G219050 NA other downstream 395664 24842302 ~ 24842533 (+)
dapp1 dapp1,LOC107579178,LOC107556904,LOC107667071,LOC107585227,LOC107733757 other downstream 715089 25161727 ~ 25174708 (+)
G219171 cunh4orf32,c3h4orf32 other downstream 810312 25256950 ~ 25302587 (+)
LOC103047652 NA other downstream 992081 25438719 ~ 25442581 (+)
LOC111196018 NA other downstream 2753814 27200452 ~ 27236616 (+)

Expression


Co-expression Network