CI01000009_02391182_02393863


Basic Information

Item Value
gene id CI01000009_02391182_02393863
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 2390445 ~ 2393863 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_02391182_02393863.mRNA
ATGTCTGCTGGCTCTTCAGTGAGCAACAAGACTTCCCCTAGTACATCTCCACAGCCCCCTCTAAGCCCATCAGCACAGTCAGACATAGAAGGTCATGAGGACTCAAAGCCTATACCTGTAGGATCTTCGTTTTCCTTACCATGTTGGGCTACCCAGGCCCTATGTGATTTAGCAAAATGTGAAACAGACCTCAGGCGACTGCGGGAGCAACAAGTGACTGAAGCACAGACAGTAGGTCGAGGTGTGGAGCGTGCACTGCTTGGAGCACAAAGGGAAGAGCACCGTCTACTGGAAAGGGTAGAACAGGATCACCGGGATCTACAGCGCAGACTGGAACAGGTGCAGAGGGAGAATGGAGCAGCCATAAGGGTTGGACAAAGATTAGTGGACCAGCGATTATATAAAGTCATTAAACTCCGAGAGCTAATAAGAAAAAGTTGTGGTGGTGATGGTAGTAAAGATCGAGAGGGGGATCTGAAGCGGGACCAACTTCTTAGGGGTGTTACAGAACTGGTCCAGCCTTGGGAAGTCTCGCTTACACTCAAACGTGTATCTTTTAAACCAAGTGCCCAACCAAACGCTGTAACCTTTGGTGAGATCAAAGTGCAAGATTACAATGTTCAGCTTCCTGTTGGAGGCTGTGGGCAGCAGGGGCAAATGTGTTCCCTCCATGCCACTGAAGCACGCAGTGGGGCTCATGTTAGTGGAGGAGGCCAGAGCACACCTGATGGAACAAGTCCTGGGCAGAACCAAGTCCTATCTCCTGGGCCTAATCCAAGGTACTCATCAACCAGTAGTGGGAACTTGAGGGTTGTCCGGAAGCTCCGTTTGTCAGCCCGAAGTGATGATGAATCAGGAGAAGAAGTAAAACGCCAGTCCCCACAACTGCGTCACAGGTCCCCTAAACAAGTCCCATGTGAACGTGATTCATCACAGGAGGATGAGTGTGAATCACCTTCATCTGAATGCAAAGGAGATGAGCTCTTTTTAGCAGTGCCATCACTTAGTCATGGTGAATTAGAGGGTGAGGATTTTGCTTGTATACAGAATGAACCAATCACACAGTTTGCTTCACAGAGAGCAAGAAGGCAAAAAGAACTGTCTCCGTCTCCAGAGCAAGGTCACCAAGAGCAAGGTGGCTGGTTCTTGAATCAGTTTGACCATAAAAATCATGCCAGAAGGACCGGATCTTCAAGAGAAACATCACGGTATGGCACACACTCATCACCACAAAGCCCCAGAGAGATCACCTCTAGTCAAGGCAGCAACAACCACTTCTTTCGTGGCAGGTCTTGCTCCCAATTAAGTGCATCCTCAGATGACCACCCACAAATCCGTGCACCATCCCCTGCGGACAGTGTAGATTCTGGGTACACTTTCATTGTCAGCTCCCCACGAGATTTCTCCAACTCCTTGCGTCCTACTGCTCGCCTCTCCAGATCAGCTGCTGACCTTTCCTACTGTAACAGACCCCTCAGTGAAACCAGAACACAGCAATCAAGCATATGGACTGGTTCTAAGACTCATATGTCCTCAAGCTCCACCTTCCAAAAAAGAAGCGAGGTGTCACGGACTAAATCCTGTCCCAGTCATGGTAACTTCTCTCAAAAGAACACCCAACAACATCCTACTTGCTCCAGTAGAGTGTCTCGCTCGCTTTCTATGTCTGTTATCGATAACTCATCTCAGAAAAGACTGAACCACCTTACCGGACGGCAGAATTCTCTAAATGAGAACAGACTGCGGGGAGAGAAGAGTGAGCCAGCCCTCCTAGTGTTAGAGGAGGATGAGGAATCATTGGCACCAGAGGAGGTGCACCTTGTCCGGCAGTTTGGTAAACAAGGCTCAGGACGTGCTGATCTCACGCTGCCCAGTGGTGTCCACGCAACACCGCAAGGTCAACTGTTCCTTGTGGATTGTGGGAATGCTCGTGTCCAGGTAACTGATGCCCATGGCAACGTCCTACAACAAGTGACTTCTCCAAGTAACGACTTAGGAGGCTCCTCGCGACGCTGCCGCAATTACTTTGATGTGGCCGTTAATGCCAAGGGTCTGATTGCTCTGAGCTGTGCAGCTGAGAGGGCTCTCCTAATCCTTAGTCGGCATGGGCGTCTCCTTCAAACATTTGGAGGGGGACCCTACATTGCAGGAGTGCCTCGAGATGAGTTGGAAGCACCGAGGGGAGTGACAGTCACCCAGAGAGATGAATTCCTAGTTGCAGATATACGAAAGGGAACTCTTACTGCACTGAAACTTGAACCTAAAACCGGTTCCAGATTGGAACGCACTGTGGTGACTGGTTTCCACAGGCCTTATCTGGTTGCAGCATGCCTGCACTCTGGTCTGGTTGCAGTGTCTGAGCGAGGCAGTGAAATGGGGCAGGAGCCTTGTGTGAAGATATTAGGACCAGCATGGGACACGCTACGAATTCTGGGTGTGTGTTCCAGCTTAGGTCCTGTACTCTCCTGTCCCTGGGGCCTCTGCATTGATAAGGATGGGGCTGTGTTAGTGGCAGACTGGGGAGAAAAACATCGAGTGCTTCTTTATCCTTCTGAAGGGGCAGGACGAGTGATTGTGTCTGATGGACTGAGCAGCCCTCGTGGACTGGCACTTTTACCACATGATCTCCTGGTTGTGTCAGATAGCATGCACCACTGCATTAAAATTTATCAGTACAAATGACTAGTTACCACAAAGCTCAAGATTCAAAAGAAAGATGTCACTGAATGAGATGAGTATTTATATTTAATTTACTATTTGCTGCCAATGCAATATCATATTGCATGGTATATAGCAGGGGTCGACAACTTACAATAAGCAACAACAGTAGAGATGAATACTAGTTAGTTGTTTATTGTTGAAAAAATGTTGAAATCCCATACATACCAGTTACCTCTTAACGTAATCCTAGTCACACATCCTGTCCTATAGCGAGCTCTATGTGAAAGCTAACACCTTTAGTTGCAATGAAGCTGTACATGTGCACTGTGCAGCATGACCTATTTGATAGCTTAGTATGCATACTTATGACCATTTTTTGACCAGAGTACTATTTTGTGGGATATTTTGTTGGGGTGGAGGTGATGTAACACTTCACACATTTTGTCACAAACATTTTATTTACTTTTTTAATTGAAAACTCAGATAGAATGCAGCAGGTTGACTGAGCTTGGCATGTAGAAATGTAGATTTTCGTGTGTGTTTGTGCATTGACATTTGTTTTGAATCCCTGGTTGCTTCTGTTGCTTATATATTGTGATTTCTTTCACAATACATGACTGTGATAATTCTACAGGTATTTGCTATTGACACAGTAGAACCTTACCAGCAGGAGGCAGTAAAGATACATGACCATGTCAGTGCATTTTTAAAGCTTTGGAAAGGATCTTTTATGAATGAAAAATGGAATTATAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_02391182_02393863.mRNA True 3419 mRNA 0.47 1 2390445 2393863

Neighbor

gene id symbol gene type direction distance location
CI01000009_02358636_02361913 HPX coding downstream 28496 2358470 ~ 2361949 (-)
CI01000009_02352214_02356619 NA coding downstream 33604 2352214 ~ 2356841 (-)
CI01000009_02327693_02335035 NA coding downstream 55410 2327693 ~ 2335035 (-)
CI01000009_02300395_02301213 OLIG2 coding downstream 88808 2300109 ~ 2301637 (-)
CI01000009_02286191_02288884 OLIG1 coding downstream 101464 2286160 ~ 2288981 (-)
CI01000009_02403219_02417215 FAM160A2 coding upstream 9293 2403156 ~ 2417215 (-)
CI01000009_02591882_02593586 RPL8.S, RPL8 coding upstream 198000 2591863 ~ 2593761 (-)
CI01000009_02610459_02610721 NA coding upstream 216397 2610260 ~ 2610721 (-)
CI01000009_02654102_02655554 CASK coding upstream 260239 2654102 ~ 2656438 (-)
CI01000009_02682050_02707583 NA coding upstream 287745 2681608 ~ 2707623 (-)
G52371 NA non-coding downstream 1906 2388314 ~ 2388539 (-)
G52342 NA non-coding downstream 174910 2214952 ~ 2215535 (-)
G52338 NA non-coding downstream 232699 2157412 ~ 2157746 (-)
G52230 NA non-coding downstream 294393 2094368 ~ 2096052 (-)
G52222 NA non-coding downstream 398459 1990621 ~ 1991986 (-)
G52328 NA non-coding upstream 5951 2399814 ~ 2400894 (-)
G52330 NA non-coding upstream 7172 2401035 ~ 2401380 (-)
G52378 NA non-coding upstream 33386 2427249 ~ 2427848 (-)
G52379 NA non-coding upstream 54503 2448366 ~ 2451640 (-)
G52440 NA non-coding upstream 119094 2512957 ~ 2513671 (-)
G52098 NA other downstream 982818 1401932 ~ 1407627 (-)
G52410 NA other upstream 157861 2551724 ~ 2562533 (-)
CI01000009_02885473_02893975 NA other upstream 489825 2883688 ~ 2893975 (-)
CI01000009_03261739_03262843 NA other upstream 867340 3261038 ~ 3262843 (-)
G52828 NA other upstream 1823557 4217420 ~ 4231469 (-)
G53515 NA other upstream 3108532 5502395 ~ 5505248 (-)

Expression


Co-expression Network