cdh23 (cdh23,LOC107679169,LOC107734258,LOC107676383)


Basic Information

Item Value
gene id cdh23
gene name cdh23,LOC107679169,LOC107734258,LOC107676383
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035921.1
NCBI id CM008324.1
chromosome length 46505145
location 40086085 ~ 40110675 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022685111.1
AGTTCCCCCGGGACTTTGAGGGCCCATTTGAGATCACAGAGGGTCAGCCCGGACCCCGAGTCTGCACTGTTAAAGCTACTGACCAGGACTCGGACCTGAATGGAAAAGTGGAATACAGCATCACAGCTGGAGACCCgaacaACGAGTTCATCGTGTCTCCTGTGGAGGGGGGAGCTGAGGGTGAAGAGAGATGTTGAGCTGGATCGAGAGACGACAGTTTATTATAACATCACCATTACAGCCAGAGACCTGGGAACACCGCCACGCAGCAGCACGGTGGTCGTGGGGGTTCAGGTTTTGGACATTAATGATAATGATCCCATTCTGCTGAACTTACCCATGAACACCAGCGTCAGCGAGGGGGCGTCTATACAGACCTCCATCGCCCGCGTGCAGGCCAGAGACTCAGACAGCGGCCACAACGCCCTGCTCACCTTCAACATCACTGCAGGAAACCCAGACGGAGCGTTCTACATCAACGAGACTtcAGGTGTGGTTCAGGTGAACAGGCCGTTAGACAGAGAGCGAGTGGCTGAATACCTGCTGACCATCACAGTCAAAGACAACCCCGAGAACCCCCGCATCGCCCGCAGGGACTCAGATGTGCTGGTGGTCACCATTCTGGACATTAATGATAACAGGCCCATCTTCACATCCTCCAGCTACAGAGGAGAGATCAGTGAGAACTCCCCCACAGGAACCACAGTGACGATACTGAACGGGCCGGTTCTGGCTGTGGACAGAGATGTTGGGGTTAATGCTGTGGTGAAGTACGGCCTGCTGGGATCCAGAGTGGACCTCTTCACCATCAACTCTACTACAGCCGTGGTGTCAGTGCGTGAGGGTGGAGTGTTGGACAGAGAAGCGTTCTCTGACCCGCGGGTGGAGCTGTTTCTGGTTGGGGAGGACATAGGGGGGCTGAACAGCAGCGTTCCCCTCACCATCACCATCCTGGACAGAAACGACAATCCTCCAGTGTTTAATCCATCCAGCTTCACCGTACGCCTTCCTGAAAACAGCCCCACAGGTGTGGTTGTGACTCAGCTCTCAGCTACGGATGCGGACGCCGGCTCTAACGGTTGGCTGCAGTACCGATTGGAGAGCGGCGCTCAGGACCGGTTTGTGGTGGACCCTCTCTCTGGGGCGGTTCTGGTCGGAAACGCGACGCTGGACCGCGAGGAGCGCCCGTCCTATCGGCTGGTCGTCGCGGCAACAGACCGGGGCACGCCCCCGCTCTCGGGCACGGCCACGCTCACCGTGGTGCTGGACGACTTGAACGACTCTCGGCCGCGCTTCCTGCAGCCGGTCCAGACTATCAGCGTGAACGAGTCCACGCCGCCCGGGGTGGTGGTGGCAACCCTCGCCGCCGAGGACCCTGACCTCCGACCCCGTCTGGAGTATTACATCATCTCTGTGGAAGCCAAAGACGACGGGAATAACCCGGTCAGCGGCCTGCAGGAGTCCTTCGGGATCGACTTTCACACAGGTGCTGTATTTGTTCGAAACCCTTTGAACAGAGAGCTGGTTGCTACTTTTGAGATCATAGTGTCAGTTCATGATAATGCCAGTGATGTCATCGACATGTCCGTCAGTGTGCCCAATGCCAGGCTGACCATCGCTGTTCTGGACGTGAACGATAACGCGCCGCGCTTTCGGCCGTTTGGCGTCACTAATTTCTCTGAGAGCATTCTGGAGGGAGCTCAGCCGGGCACCACGCTACTCTCAGTCTCCGCAGTGGATCCAGACAAAGGCCCTAATGGACAGATATTCTACGAGCTTCTGCATCTGCCCAGAGGAGACTACGTGCGACTCGAGGACCCCTCTACAGGTAAGATTATAGCCAATCGGACGGTGGATTACGAGCAGGTTCAGTGGCTGAACTTCACCGTGCGCACTCAGGATCGGGGCAGCCCGCCAAGGTTCTCCGAGCTTCCTGTTTACCTGCGTATTGTCGACGTCAACGACAACAACCCCGTCTTCCTACAGCCCTCGTATCAGagACAAGTATTGGAGGATGTGGCTCTGGGTACCATCATAGTGCGAGTGAGCGCTACAGACGCTGACTCAGGACTCTTCTCGGTTATTGAGTACTCATTGGTGGATGGAGAGGGGAAGTTTGGAATCACCCCCTCTACGGGGGATATCTACATTCTGTCTCGGCTGGACCGAGAGACTAAAGACCGCTACACCCTCACCGCCATCGCACGGGACAACCCCGGGGGCAGCCCCAACAACCGGCGGGAAAATTCAGTTCAGGTTTTGGTGACGGTTCTGGATGTGAATGATTTCCGTCCGCGGTTCAGCTCCAGCGTTTTCAGCACCAATGTGTTTGAGAACGAGCCGAGCGGGACGTCTGTGATAACACTGACCGCTACTGATCTGGACGAGGGGGAAAACGCCCTGCTCACGTACAGCCTGCAGGGGCCCGGAGCAgatgcGTTCTCTCTGGACCCGGACACTGGTCTGATCCGTTCTCTGCGTCTGCTGCACAGTTTTGAGAGGTTTAATCTGACTGTAATTGCCACAGACCACGGTAGACCCCCGCTCTGGGGCACTGCCAGTCTCCAGATCACCGTCATTGACGTCAATGACAACAGACCTGTCTTTGTGAGACCGGCCAATGGAACCATCATGCATATCCTTGAAGAGCAGCCCCCTGGGTTAGTGGTGTACGAGGTGTTTGCGACGGATGAGGATGAAGGAGTGAACGGGGAGGTGCGCTACAGCTTCTTGCAGACTGGAGCCGGAAACAGAGACTGGGAAAACTTCCACATCGACGCTCTGACTGGCGTCATCACCACTGCCGTCAAACTGGACCGAGAGAAGCAGCCGCTGTACAGCCTGATCGTGGTGGCGTATGATCTAGGCCAGCCGGTTCCTTACGAGACCACCCAGCCTCTGCAGGTAGCTCTGTCTGATCTAGATGACAACGAGCCGGTCTTCCTCAAACCCCCgagaggTGGAATTCTATTCCAGTCTCTGAATGTTCCAGAGCACTCCTCTCCTGGCACTGTGGTGGGGAACGTTACAGGGGCAGTGGATGCAGATGAGGGCTCCAACGCTATTGTCTACTACTTCATCGCAGGGGGAGACACTGATGGGAACTTTGCTCTGAGTGTGTCTGGAGTGCTCAGAGTGAAGAAGGATCTGGACCGTGAGGAAATTCCCATGTATTCCATCATCGTTAAAGCCTCCAGCAATCGCAACTGGTCTCCACCGAGGGGTCAGAGGTCGAAAACAAACCGCGCGCTCGATCCCAGCCGTGATCCAACCCTGCAGGAGGTCCGCATCTACCTGGAGGACATTAATGACCAGCCCCCAAGATTCACAAAGATGGAGTACACTGCAGGCGTGGCTGCAGATGCTAAAGTGGGCTCTGAACTGATCCAGGTTCAGGCCGTCGACAACGATATCGGAAACAACAGTCTGATTCTGTATCACATTCTGTCCATCCGCTACATAAAACTACTGTCCAACGACTCGGAGGACATCGGCAATGTTTATATAATTGGTGAAACGGATGGTATAATCCGAACATTTGACCTGTTCACGGCTTATGACCCGGGCTATTTTGTGGTGGAGGTGCTGGCGAGGGACCTGGCGGGACACAGCGACGTGGCGATAGTGGGAATCTACATCCTGCGGGACGATCAGAGGGTGAAGCTCATCATAAATGAGATACCGGAGCGAGTCTGGCTCTTTCAGGAGGAGCTAATCAACCTGCTCTCAAACATCACCGGAGCCATTGTCAACATGGACGATGTAcagTTCCATGTGGATAAAAAGGGTAGAGTAAACTTTGCACAAACTGATGTTCTGATTCACGTGGTCAACAAGCAAACCAACCGCATCCTGGATGTGGAGAGGGTGATTCAGATGATTGATGAGAATAAGGAACAGCTGAGAAATCTGTTCAGGAACTATAACGTCCTGGATGTCCAGCCTGCAGTGAGTGGACGAGCACCTGATGATCTCACTACCCTGCAGATGGCTATAATAATCTTGGCTGTATTGCTGTTCTTGGCAGCCATGCTCTTCATTTTCATGAACTGGTATTATCGAACAGTACACAAGAGGAAGCTGAAGGCCATCGTCGCTGGCTCCACAGGCAACCAGGGACTGATGGACATCCTGGACATGCCCAACACCAACAAGTATTCGTTTGAAGGaGCCAATCCTGTGTGGTTGGATCCGTTCTGCAGAAACCTGGAGCTGGCAGCCCAGGCCGAACATGAAGACGACTTACCTGAGAACCTGAGTGACATCACTGATTTGTGGAACAGCCCTGCTCGCACTCACGGCACGTTTGGGCGTGAGCCTCACGCTAATAAGCCGGAGGATGACCGCTACCTCAGAGCTGCTATTCAGGAGTACGACAACATCGCTAAACTGGGTCAGATTATGCGAGAAGGACCCATTAAGGGTTCACTGCTAAAGGTGGTACTGGACGATTATCTGAGGCTCAAAAAGCTCTTCGCCGCCCGCATGGTGACCAAGTCAACCAGTCAGGACCAGTCATCGATCACAGAGCTGGTCCAGAGCGACCTGGACGAGGATGATGACGAGCGGCTCGGTGTGGGAGGAAGAGGAACGCTTCGCTTTAAGCACAAGCACCCTGTGGAGCTGCGCGGTCCAGACGGTGTTCACGTGGTGCACGGCAGCACAGGCACCCTGCTGACCTCAGACCTCAACAGCCTGCCAGAGGATGACCAGCGGGCCCTGGCCCGTTCTCTGGAGGCACTGCATGCTGACGGCGGACTGTACGCCGAGCGCAACGCACGCACAGAGTCGGCCAAGTCCACACCCATGCACCGCAACAAGAGCACGCTATCGGAAAGCCCACTGGAGATAACGGAGTTATGACTAGCCGAGGCCTCGCTGGTATGAGAAGGGCTACACCAGACTAGCCCCCTCCTGACCCCATCCTGCACTATATCTGATATTATCCCTCTGCCGGTAGAAGGGGTGGGTGTTTTTaccattaattttaaataactttaaatatccACTTTAATAATAGAATCCTGACAAGAAAATATCTTTCTTacttacaaatacaaaatataaagtatagccAGTTTtgctatttgtttattttgtacagTTCACATTAAAAGCAGATTGGGAACTGACTGATAAGTTAAAGTAATAAAGGATTTATCTTTGTATTTTTACAACTCGAACAATTTACAAAATTGCTTGTCTTTACAAAACGTCTCCATAGTGACTGAACTTCAGCtttgttcacaaaaaaagtaaaagtggcCCATATCTGAAAAGTTCATGCTTCTAAACTGATGAACATGCGCAATGAATCACATGACCCACTTTTCCAAATGTAAATGAtcaaaatagcattaaaataatgaatatgaaatgaacatttcagctattttactaaatagaaatatctaaaaaaataaaataaaataacaacctTTGcacatatttatgaaaataaatgtcAAATTGGAATAGTGCAAAAGTCACACAAATTTCAGAAATCTGGCTGTTCTTTTTGACTCCTATCAGATATAGATCAGACTTTAATATCACAAATAAAAGCATATGCCACACAGAAAGCATGAGTATCATGATAACTAttagaaataattgcaatactATGCAATAAATTGCCattttgtgacttttttttttgacactgATCTATATAAAGTATTAATAAGCATAATAATGCAGAGTAAATGAGTCACgtaaaaataagtgattttaaaacactgttcttttgcatttttacaAGTGGGTCAGTTTAGAAGCAAGAATTGTCACAATAAAAAAGTCAccataaaaatgatttaaaaaacatattttgatgCAATAGATATGAAATTAATTATGGCATTAACTTACATTAATTGGGAAACTGTGCTGTAGTTCCGTTTGTGTTcattacattacgttacataaaaaaaataaaaaaatcttacagatGAATTTACGAAGccctttataaataaatagctaCACCCATCACGAGTCAGAACTGAAGGCGGAGGAGGGCAGAAGTCAATGGGAGTGTATGGGAGTCGATGGAGTTAATGGGGTCTGGAGTGggccagctgtgtgtgtgtgtgtgtgtgtgtgtggggggagcAGGGGGACCTGAGACACGTGAGGAACGATGGACAGAAATGAAAGCCATTTGGACGCCTCAAATCAGaactatatgtatgtatgtgtgtgtgtgtatgcaacTTACATACATTTTCACGGATTCACGGAGCTCGGATTTCCTTTTTTCCAGTGAAGACGATGAGGACGGCGATGCAGCTGCAGCGATGAGTGAACACTTATTTGCCACGGACGACAGGAGCTGATGTTTGACcccctcaccacacacacttttgagaagagagaaaaaaacaacagaagaattAAAAAGCCCTCTCAAACCAGCGGAAGGCCGAACACAAActctagtttttttattttgttattggaATGGGTTCCAGGGATTTCTGACTTCAACTGTGTTGGGTAAAATATCCATTtgatatttgcaaaaaataaaaaaatgacttttaaaaacacttcttaacctgcagaaaaaaaaagagacattaAGAAGTGACTATTCTCAATTACTGGCCTGAGTCGTCTTCCCTTTGGAATCATAAAGCGGACTCTCAAGGAAACAACGGAGGAGTaactttaaaaatttaaaaaaaagtacgaCAGGAATCggactcttttttttcctggagCAGTGAAAGGTCTAGAAGGCTGACCAAGCACTGTAACTGACAGTATTGACTGATTTGAGGCCAGAGATGAACCTCACTGAATCACTTCTGAATCACACTTGAACTGTGAAGGAAGGCGTGTCATGTGCTTAcagagaaaatataataaaaccagAGCCGTCCGGCTTTGTGTTCAAAGTTTAGCCCAACTCACAAAACTCATTCTACATtatttagaaaaagaaaagaaagaaaaggaaactgACCTTTCCACTCAAAGTTTTCTCCAGTTGATGTCGTGACACTGCCAtctatgagagagagagagagaaagaaaaaataacatgaatctttattttcctttacgtttttttatataaaaaagttaagaaaaatatttttgaaaaaaaaaggggaaaaaaataagagctgACCTACCAAACTGAGCCGAGTGAAAATGGATGTTCTAGATAAATGTACCAGCTGatggattattatttttgttttatgtatatCAGAGTTGAACTAAGTTATCTGGACTTGTTGCGTATGTTGTGCGTGTCtggcattattttttatatcccccTTTTTTGTAAGAcgttatttttgtcatttgtgtGTTGCGTCACCAGCTCTGAGGTACTGGATGGGAAATGTTGTTGGATGATCTgtgataataaaagaaatatgcaACGGT
>XM_022685112.1
AGTTCCCCCGGGACTTTGAGGGCCCATTTGAGATCACAGAGGGTCAGCCCGGACCCCGAGTCTGCACTGTTAAAGCTACTGACCAGGACTCGGACCTGAATGGAAAAGTGGAATACAGCATCACAGCTGGAGACCCgaacaACGAGTTCATCGTGTCTCCTGTGGAGGGGGGAGCTGAGGGTGAAGAGAGATGTTGAGCTGGATCGAGAGACGACAGTTTATTATAACATCACCATTACAGCCAGAGACCTGGGAACACCGCCACGCAGCAGCACGGTGGTCGTGGGGGTTCAGGTTTTGGACATTAATGATAATGATCCCATTCTGCTGAACTTACCCATGAACACCAGCGTCAGCGAGGGGGCGTCTATACAGACCTCCATCGCCCGCGTGCAGGCCAGAGACTCAGACAGCGGCCACAACGCCCTGCTCACCTTCAACATCACTGCAGGAAACCCAGACGGAGCGTTCTACATCAACGAGACTtcAGGTGTGGTTCAGGTGAACAGGCCGTTAGACAGAGAGCGAGTGGCTGAATACCTGCTGACCATCACAGTCAAAGACAACCCCGAGAACCCCCGCATCGCCCGCAGGGACTCAGATGTGCTGGTGGTCACCATTCTGGACATTAATGATAACAGGCCCATCTTCACATCCTCCAGCTACAGAGGAGAGATCAGTGAGAACTCCCCCACAGGAACCACAGTGACGATACTGAACGGGCCGGTTCTGGCTGTGGACAGAGATGTTGGGGTTAATGCTGTGGTGAAGTACGGCCTGCTGGGATCCAGAGTGGACCTCTTCACCATCAACTCTACTACAGCCGTGGTGTCAGTGCGTGAGGGTGGAGTGTTGGACAGAGAAGCGTTCTCTGACCCGCGGGTGGAGCTGTTTCTGGTTGGGGAGGACATAGGGGGGCTGAACAGCAGCGTTCCCCTCACCATCACCATCCTGGACAGAAACGACAATCCTCCAGTGTTTAATCCATCCAGCTTCACCGTACGCCTTCCTGAAAACAGCCCCACAGGTGTGGTTGTGACTCAGCTCTCAGCTACGGATGCGGACGCCGGCTCTAACGGTTGGCTGCAGTACCGATTGGAGAGCGGCGCTCAGGACCGGTTTGTGGTGGACCCTCTCTCTGGGGCGGTTCTGGTCGGAAACGCGACGCTGGACCGCGAGGAGCGCCCGTCCTATCGGCTGGTCGTCGCGGCAACAGACCGGGGCACGCCCCCGCTCTCGGGCACGGCCACGCTCACCGTGGTGCTGGACGACTTGAACGACTCTCGGCCGCGCTTCCTGCAGCCGGTCCAGACTATCAGCGTGAACGAGTCCACGCCGCCCGGGGTGGTGGTGGCAACCCTCGCCGCCGAGGACCCTGACCTCCGACCCCGTCTGGAGTATTACATCATCTCTGTGGAAGCCAAAGACGACGGGAATAACCCGGTCAGCGGCCTGCAGGAGTCCTTCGGGATCGACTTTCACACAGGTGCTGTATTTGTTCGAAACCCTTTGAACAGAGAGCTGGTTGCTACTTTTGAGATCATAGTGTCAGTTCATGATAATGCCAGTGATGTCATCGACATGTCCGTCAGTGTGCCCAATGCCAGGCTGACCATCGCTGTTCTGGACGTGAACGATAACGCGCCGCGCTTTCGGCCGTTTGGCGTCACTAATTTCTCTGAGAGCATTCTGGAGGGAGCTCAGCCGGGCACCACGCTACTCTCAGTCTCCGCAGTGGATCCAGACAAAGGCCCTAATGGACAGATATTCTACGAGCTTCTGCATCTGCCCAGAGGAGACTACGTGCGACTCGAGGACCCCTCTACAGGTAAGATTATAGCCAATCGGACGGTGGATTACGAGCAGGTTCAGTGGCTGAACTTCACCGTGCGCACTCAGGATCGGGGCAGCCCGCCAAGGTTCTCCGAGCTTCCTGTTTACCTGCGTATTGTCGACGTCAACGACAACAACCCCGTCTTCCTACAGCCCTCGTATCAGagACAAGTATTGGAGGATGTGGCTCTGGGTACCATCATAGTGCGAGTGAGCGCTACAGACGCTGACTCAGGACTCTTCTCGGTTATTGAGTACTCATTGGTGGATGGAGAGGGGAAGTTTGGAATCACCCCCTCTACGGGGGATATCTACATTCTGTCTCGGCTGGACCGAGAGACTAAAGACCGCTACACCCTCACCGCCATCGCACGGGACAACCCCGGGGGCAGCCCCAACAACCGGCGGGAAAATTCAGTTCAGGTTTTGGTGACGGTTCTGGATGTGAATGATTTCCGTCCGCGGTTCAGCTCCAGCGTTTTCAGCACCAATGTGTTTGAGAACGAGCCGAGCGGGACGTCTGTGATAACACTGACCGCTACTGATCTGGACGAGGGGGAAAACGCCCTGCTCACGTACAGCCTGCAGGGGCCCGGAGCAgatgcGTTCTCTCTGGACCCGGACACTGGTCTGATCCGTTCTCTGCGTCTGCTGCACAGTTTTGAGAGGTTTAATCTGACTGTAATTGCCACAGACCACGGTAGACCCCCGCTCTGGGGCACTGCCAGTCTCCAGATCACCGTCATTGACGTCAATGACAACAGACCTGTCTTTGTGAGACCGGCCAATGGAACCATCATGCATATCCTTGAAGAGCAGCCCCCTGGGTTAGTGGTGTACGAGGTGTTTGCGACGGATGAGGATGAAGGAGTGAACGGGGAGGTGCGCTACAGCTTCTTGCAGACTGGAGCCGGAAACAGAGACTGGGAAAACTTCCACATCGACGCTCTGACTGGCGTCATCACCACTGCCGTCAAACTGGACCGAGAGAAGCAGCCGCTGTACAGCCTGATCGTGGTGGCGTATGATCTAGGCCAGCCGGTTCCTTACGAGACCACCCAGCCTCTGCAGGTAGCTCTGTCTGATCTAGATGACAACGAGCCGGTCTTCCTCAAACCCCCgagaggTGGAATTCTATTCCAGTCTCTGAATGTTCCAGAGCACTCCTCTCCTGGCACTGTGGTGGGGAACGTTACAGGGGCAGTGGATGCAGATGAGGGCTCCAACGCTATTGTCTACTACTTCATCGCAGGGGGAGACACTGATGGGAACTTTGCTCTGAGTGTGTCTGGAGTGCTCAGAGTGAAGAAGGATCTGGACCGTGAGGAAATTCCCATGTATTCCATCATCGTTAAAGCCTCCAGCAATCGCAACTGGTCTCCACCGAGGGGTCAGAGGTCGAAAACAAACCGCGCGCTCGATCCCAGCCGTGATCCAACCCTGCAGGAGGTCCGCATCTACCTGGAGGACATTAATGACCAGCCCCCAAGATTCACAAAGATGGAGTACACTGCAGGCGTGGCTGCAGATGCTAAAGTGGGCTCTGAACTGATCCAGGTTCAGGCCGTCGACAACGATATCGGAAACAACAGTCTGATTCTGTATCACATTCTGTCCATCCGCTACATAAAACTACTGTCCAACGACTCGGAGGACATCGGCAATGTTTATATAATTGGTGAAACGGATGGTATAATCCGAACATTTGACCTGTTCACGGCTTATGACCCGGGCTATTTTGTGGTGGAGGTGCTGGCGAGGGACCTGGCGGGACACAGCGACGTGGCGATAGTGGGAATCTACATCCTGCGGGACGATCAGAGGGTGAAGCTCATCATAAATGAGATACCGGAGCGAGTCTGGCTCTTTCAGGAGGAGCTAATCAACCTGCTCTCAAACATCACCGGAGCCATTGTCAACATGGACGATGTAcagTTCCATGTGGATAAAAAGGGTAGAGTAAACTTTGCACAAACTGATGTTCTGATTCACGTGGTCAACAAGCAAACCAACCGCATCCTGGATGTGGAGAGGGTGATTCAGATGATTGATGAGAATAAGGAACAGCTGAGAAATCTGTTCAGGAACTATAACGTCCTGGATGTCCAGCCTGCAGTGAGTGGACGAGCACCTGATGATCTCACTACCCTGCAGATGGCTATAATAATCTTGGCTGTATTGCTGTTCTTGGCAGCCATGCTCTTCATTTTCATGAACTGGTATTATCGAACAGTACACAAGAGGAAGCTGAAGGCCATCGTCGCTGGCTCCACAGGCAACCAGGGACTGATGGACATCCTGGACATGCCCAACACCAACAAGTATTCGTTTGAAGGaGCCAATCCTGTGTGGTTGGATCCGTTCTGCAGAAACCTGGAGCTGGCAGCCCAGGCCGAACATGAAGACGACTTACCTGAGAACCTGAGTGACATCACTGATTTGTGGAACAGCCCTGCTCGCACTCACGGCACGTTTGGGCGTGAGCCTCACGCTAATAAGCCGGAGGATGACCGCTACCTCAGAGCTGCTATTCAGGAGTACGACAACATCGCTAAACTGGGTCAGATTATGCGAGAAGGACCCATTAAGCTGGTCCAGAGCGACCTGGACGAGGATGATGACGAGCGGCTCGGTGTGGGAGGAAGAGGAACGCTTCGCTTTAAGCACAAGCACCCTGTGGAGCTGCGCGGTCCAGACGGTGTTCACGTGGTGCACGGCAGCACAGGCACCCTGCTGACCTCAGACCTCAACAGCCTGCCAGAGGATGACCAGCGGGCCCTGGCCCGTTCTCTGGAGGCACTGCATGCTGACGGCGGACTGTACGCCGAGCGCAACGCACGCACAGAGTCGGCCAAGTCCACACCCATGCACCGCAACAAGAGCACGCTATCGGAAAGCCCACTGGAGATAACGGAGTTATGACTAGCCGAGGCCTCGCTGGTATGAGAAGGGCTACACCAGACTAGCCCCCTCCTGACCCCATCCTGCACTATATCTGATATTATCCCTCTGCCGGTAGAAGGGGTGGGTGTTTTTaccattaattttaaataactttaaatatccACTTTAATAATAGAATCCTGACAAGAAAATATCTTTCTTacttacaaatacaaaatataaagtatagccAGTTTtgctatttgtttattttgtacagTTCACATTAAAAGCAGATTGGGAACTGACTGATAAGTTAAAGTAATAAAGGATTTATCTTTGTATTTTTACAACTCGAACAATTTACAAAATTGCTTGTCTTTACAAAACGTCTCCATAGTGACTGAACTTCAGCtttgttcacaaaaaaagtaaaagtggcCCATATCTGAAAAGTTCATGCTTCTAAACTGATGAACATGCGCAATGAATCACATGACCCACTTTTCCAAATGTAAATGAtcaaaatagcattaaaataatgaatatgaaatgaacatttcagctattttactaaatagaaatatctaaaaaaataaaataaaataacaacctTTGcacatatttatgaaaataaatgtcAAATTGGAATAGTGCAAAAGTCACACAAATTTCAGAAATCTGGCTGTTCTTTTTGACTCCTATCAGATATAGATCAGACTTTAATATCACAAATAAAAGCATATGCCACACAGAAAGCATGAGTATCATGATAACTAttagaaataattgcaatactATGCAATAAATTGCCattttgtgacttttttttttgacactgATCTATATAAAGTATTAATAAGCATAATAATGCAGAGTAAATGAGTCACgtaaaaataagtgattttaaaacactgttcttttgcatttttacaAGTGGGTCAGTTTAGAAGCAAGAATTGTCACAATAAAAAAGTCAccataaaaatgatttaaaaaacatattttgatgCAATAGATATGAAATTAATTATGGCATTAACTTACATTAATTGGGAAACTGTGCTGTAGTTCCGTTTGTGTTcattacattacgttacataaaaaaaataaaaaaatcttacagatGAATTTACGAAGccctttataaataaatagctaCACCCATCACGAGTCAGAACTGAAGGCGGAGGAGGGCAGAAGTCAATGGGAGTGTATGGGAGTCGATGGAGTTAATGGGGTCTGGAGTGggccagctgtgtgtgtgtgtgtgtgtgtgtgtggggggagcAGGGGGACCTGAGACACGTGAGGAACGATGGACAGAAATGAAAGCCATTTGGACGCCTCAAATCAGaactatatgtatgtatgtgtgtgtgtgtatgcaacTTACATACATTTTCACGGATTCACGGAGCTCGGATTTCCTTTTTTCCAGTGAAGACGATGAGGACGGCGATGCAGCTGCAGCGATGAGTGAACACTTATTTGCCACGGACGACAGGAGCTGATGTTTGACcccctcaccacacacacttttgagaagagagaaaaaaacaacagaagaattAAAAAGCCCTCTCAAACCAGCGGAAGGCCGAACACAAActctagtttttttattttgttattggaATGGGTTCCAGGGATTTCTGACTTCAACTGTGTTGGGTAAAATATCCATTtgatatttgcaaaaaataaaaaaatgacttttaaaaacacttcttaacctgcagaaaaaaaaagagacattaAGAAGTGACTATTCTCAATTACTGGCCTGAGTCGTCTTCCCTTTGGAATCATAAAGCGGACTCTCAAGGAAACAACGGAGGAGTaactttaaaaatttaaaaaaaagtacgaCAGGAATCggactcttttttttcctggagCAGTGAAAGGTCTAGAAGGCTGACCAAGCACTGTAACTGACAGTATTGACTGATTTGAGGCCAGAGATGAACCTCACTGAATCACTTCTGAATCACACTTGAACTGTGAAGGAAGGCGTGTCATGTGCTTAcagagaaaatataataaaaccagAGCCGTCCGGCTTTGTGTTCAAAGTTTAGCCCAACTCACAAAACTCATTCTACATtatttagaaaaagaaaagaaagaaaaggaaactgACCTTTCCACTCAAAGTTTTCTCCAGTTGATGTCGTGACACTGCCAtctatgagagagagagagagaaagaaaaaataacatgaatctttattttcctttacgtttttttatataaaaaagttaagaaaaatatttttgaaaaaaaaaggggaaaaaaataagagctgACCTACCAAACTGAGCCGAGTGAAAATGGATGTTCTAGATAAATGTACCAGCTGatggattattatttttgttttatgtatatCAGAGTTGAACTAAGTTATCTGGACTTGTTGCGTATGTTGTGCGTGTCtggcattattttttatatcccccTTTTTTGTAAGAcgttatttttgtcatttgtgtGTTGCGTCACCAGCTCTGAGGTACTGGATGGGAAATGTTGTTGGATGATCTgtgataataaaagaaatatgcaACGGT

Function

symbol description
cdh23 Enables transmembrane transporter activity. Acts upstream of or within several processes, including detection of mechanical stimulus involved in sensory perception of sound; equilibrioception; and mechanoreceptor differentiation. Located in cilium. Is expressed in nervous system and otic vesicle. Human ortholog(s) of this gene implicated in Usher syndrome type 1D; autosomal recessive nonsyndromic deafness; autosomal recessive nonsyndromic deafness 12; and pituitary adenoma 5. Orthologous to human CDH23 (cadherin related 23).

NR:

description
LOW QUALITY PROTEIN: cadherin-23-like

GO:

id name namespace
GO:0006897 endocytosis biological_process
GO:0060117 auditory receptor cell development biological_process
GO:0060122 inner ear receptor cell stereocilium organization biological_process
GO:0050957 equilibrioception biological_process
GO:0050974 detection of mechanical stimulus involved in sensory perception biological_process
GO:0007605 sensory perception of sound biological_process
GO:0035678 neuromast hair cell morphogenesis biological_process
GO:0042891 obsolete antibiotic transport biological_process
GO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules biological_process
GO:0005886 plasma membrane cellular_component
GO:0005929 cilium cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005509 calcium ion binding molecular_function
GO:0042895 obsolete antibiotic transmembrane transporter activity molecular_function

KEGG:

id description
K06813 CDH23, USH1D; cadherin 23

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022685111.1 True 7401 mRNA 0.48 30 40086085 40110675
XM_022685112.1 False 7293 mRNA 0.48 29 40086085 40110675

Neighbor

gene id symbol gene type direction distance location
gphb5 NA coding upstream 502867 39577772 ~ 39583218 (+)
LOC111196043 NA coding upstream 709447 39373982 ~ 39376638 (+)
LOC103047800 NA coding upstream 714726 39335281 ~ 39371359 (+)
LOC103040939 LOC108414593 coding upstream 933655 39052496 ~ 39152430 (+)
dcdc2b dcdc2b coding upstream 1112976 38941253 ~ 38973109 (+)
eif3l eif3l,LOC102789421 coding downstream 87713 40198388 ~ 40207129 (+)
LOC103047342 NA coding downstream 97731 40208406 ~ 40217036 (+)
LOC103045354 fndc5,LOC108237574,LOC107575402,LOC108238726,LOC106589070,LOC102792536 coding downstream 875499 40986174 ~ 41008038 (+)
LOC111196049 NA coding downstream 978827 41089502 ~ 41098828 (+)
LOC111195996 NA coding downstream 1085310 41195985 ~ 41198825 (+)
G222820 cunh10orf54 non-coding upstream 19093 40062324 ~ 40066992 (+)
G222817 NA non-coding upstream 44359 40040422 ~ 40041726 (+)
G222732 NA non-coding upstream 275259 39808569 ~ 39810826 (+)
G222731 NA non-coding upstream 277658 39805895 ~ 39808427 (+)
G222734 NA non-coding upstream 280283 39803245 ~ 39805802 (+)
G222850 NA non-coding downstream 130083 40240758 ~ 40241004 (+)
G222869 NA non-coding downstream 198273 40308948 ~ 40309775 (+)
G222868 NA non-coding downstream 199205 40309880 ~ 40312837 (+)
G222884 NA non-coding downstream 230879 40341554 ~ 40342874 (+)
G222887 NA non-coding downstream 289102 40399777 ~ 40400065 (+)
G222694 ppp2r5e,LOC102786035 other upstream 372070 39678502 ~ 39714015 (+)
LOC103047486 LOC108443507 other upstream 814947 39197707 ~ 39271138 (+)
oip5 NA other upstream 1187252 38894873 ~ 38898833 (+)
LOC103040744 LOC103040744,LOC108439706,LOC108263332 other upstream 1341901 38735939 ~ 38744184 (+)
slc38a6 NA other upstream 3066783 37001085 ~ 37019302 (+)
zfyve21 zfyve21 other downstream 220398 40331073 ~ 40339652 (+)
LOC103047655 NA other downstream 239132 40349807 ~ 40352656 (+)
LOC103045954 ypel5,slc30a10,LOC107568027,LOC108441457,LOC102788175,LOC102210471 other downstream 954983 41065658 ~ 41073316 (+)
LOC103046574 NA other downstream 1074286 41184961 ~ 41193209 (+)
gfra1 gfra1a,LOC108442611,LOC107568111,LOC107666504 other downstream 2133136 42243811 ~ 42371581 (+)

Expression


Co-expression Network