CI01000009_02596511_02597101


Basic Information

Item Value
gene id CI01000009_02596511_02597101
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 2595966 ~ 2597112 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_02596511_02597101.mRNA
CTGTAAAATCAGGGAAGTTGGTTTATACTCTGTCTAATCAGGGAAGGTTGTTTAACAGAATAGTTGTCCTCTACGTTGCTAGAGAAGGTTTATCCTCTGTAAAGTTAGGGAAGATTTATTTTCTTCTTTACCAGGGAAGGTGATTTATCCTGTGTTGTCAGAGAAGATACATCCTTTGTTCAACCAGGGAAGGTTAACAACAGTTACAGTGTGTTAACAGTAGTTTGTCCTCTGCTTTGCTAGGGAAGTGGTTATCCTCTACGTTGCTAGAGATGGTTTATTCTCTGTAGAATTAGGGAAGATTTATCCTCTGCTCTACCAGTGAAGGTTGAAAACATGTGTATTAGCCACTAGGTTACCCTCTGCTTTGTCAGATTGGTTGTCCTCTGCTCGCCAGGGAAGTGTTAAAAATGTACTGTTGTGCCTGAAAGACATTACAAAATGTTGAGAAAGAATGCTAGACTAATTCCAACAACTGAAAAAGGTGGACTATAGCTACCCCTTCATGGACAGACAGTGAATTCAAATCATTGTTAGGAAAGCACATGGAATCCATAGTGACCGAGTCAGTCAGACTAGAATTGGCAAAGAAATTTGGTATTCATCCAGAAAAAGTTTGGTCCATTGAAGAATGCAAAAAAGTACTTGGTGCTTGTATTCAGAAGAAAAATATGAAGGGCATTATCTGCTGCCACAGAGAATTTACTCTATCCATTGCACAAGAACAAATCCAATGTATTGCTAAGTTAGAAGAGCAGAACAAACAGTTGCACACTCGAGTGTCTCATCTCACTCAGAAGTTGGGCCGTAACAAAGCATCAACCAAAAGTGACTCAAACGACCAACAGTCAGATGAAAGCTATCCTGATTTAGAGTCTTTATGTAGAGTAGAGGACAATATCAATACTGGATTCAGAGTAGGATTCAGAGAGGCTCAGAGTAGGGTAAAAGGTGTTGACGTTGTTCCATCTGCAACCGCCATAGTGCAGTTACAAGCAGTCAGTACAGCTCTTGGTCCTGAAGCCATAGAAAGACTTTCTGAGAGTTTGCCATCAGTGCATAGATATTTTTCTGAGTTTAGGAGAGAGTTGTCCAGAAAAATGAATTTTATGTATCACAGAAGTAGCAGAAGTTGAAGAAATACCCA

Function

NR:

description
PREDICTED: 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_02596511_02597101.mRNA True 1147 mRNA 0.40 1 2595966 2597112

Neighbor

gene id symbol gene type direction distance location
CI01000009_02572388_02587828 USP9, USP9X coding upstream 7915 2572388 ~ 2588051 (+)
CI01000009_02499173_02519062 DOPEY2 coding upstream 76811 2498969 ~ 2519155 (+)
CI01000009_02479541_02488142 VANGL1 coding upstream 107207 2479541 ~ 2488759 (+)
CI01000009_02449805_02450173 NHLH2 coding upstream 145610 2447997 ~ 2450356 (+)
CI01000009_02426085_02433745 CNGA4 coding upstream 162171 2425575 ~ 2433795 (+)
CI01000009_02601021_02609375 DDX3X, DDX3A coding downstream 3909 2601021 ~ 2609377 (+)
CI01000009_02615073_02617401 NYX coding downstream 17544 2614656 ~ 2618195 (+)
CI01000009_02656782_02657768 NA coding downstream 59445 2656557 ~ 2657823 (+)
CI01000009_02667840_02668883 NA coding downstream 70330 2667442 ~ 2669164 (+)
CI01000009_02674026_02678655 NA coding downstream 76690 2673802 ~ 2678746 (+)
G51368 NA non-coding upstream 167644 2428122 ~ 2428322 (+)
G51354 NA non-coding upstream 170683 2415700 ~ 2425283 (+)
G51272 NA non-coding upstream 194599 2401033 ~ 2401367 (+)
G51270 NA non-coding upstream 195072 2399778 ~ 2400894 (+)
G51358 NA non-coding upstream 227552 2368182 ~ 2368414 (+)
G51394 NA non-coding downstream 34665 2631777 ~ 2633862 (+)
G51470 NA non-coding downstream 225850 2822962 ~ 2823706 (+)
G51388 NA non-coding downstream 243298 2840410 ~ 2844319 (+)
G51495 NA non-coding downstream 304362 2901474 ~ 2901723 (+)
G51496 NA non-coding downstream 304835 2901947 ~ 2902312 (+)
G51274 NA other upstream 245480 2255099 ~ 2350486 (+)
CI01000009_01897343_01919208 PIKFYVE other upstream 694540 1897343 ~ 1919516 (+)
G51122 NA other upstream 914000 1680146 ~ 1681966 (+)
CI01000009_01431700_01434463 NA other upstream 1157611 1429873 ~ 1435328 (+)
G50920 NA other upstream 1825733 769841 ~ 770233 (+)
G51529 NA other downstream 464921 3062033 ~ 3062587 (+)
CI01000009_03202999_03207060 MPC2, MPC2.S other downstream 605660 3202207 ~ 3208984 (+)
G53388 NA other downstream 2925130 5522242 ~ 5540638 (+)
CI01000009_05931829_05943829 KCNH3 other downstream 3263190 5931718 ~ 5943899 (+)
G53651 NA other downstream 3648452 6245564 ~ 6248392 (+)

Expression


Co-expression Network