trnag-gcc_16


Basic Information

Item Value
gene id trnag-gcc_16
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035921.1
NCBI id CM008324.1
chromosome length 46505145
location 42411915 ~ 42411984 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnag-gcc_16
GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTGCCACGCGGGAggcccgggttcgattcccgcCAATGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnag-gcc_16 True 70 tRNA 0.61 1 42411915 42411984

Neighbor

gene id symbol gene type direction distance location
LOC103043683 NA coding upstream 189861 42215743 ~ 42222054 (+)
LOC103042542 NA coding upstream 1117665 41287961 ~ 41294250 (+)
LOC103044280 NA coding upstream 1132837 41276985 ~ 41279078 (+)
LOC111195996 NA coding upstream 1213090 41195985 ~ 41198825 (+)
LOC111196049 NA coding upstream 1313087 41089502 ~ 41098828 (+)
LOC103047539 NA coding downstream 299476 42711460 ~ 42721934 (+)
fam204a fam204a coding downstream 362261 42774245 ~ 42802285 (+)
rab11fip2 rab11fip2 coding downstream 496521 42908505 ~ 42935835 (+)
LOC103028407 NA coding downstream 777376 43189360 ~ 43193440 (+)
LOC103043584 LOC108426108 coding downstream 888902 43300886 ~ 43310949 (+)
trnag-gcc_15 NA non-coding upstream 258 42411587 ~ 42411657 (+)
trnag-gcc_14 NA non-coding upstream 423 42411423 ~ 42411492 (+)
trnag-gcc_13 NA non-coding upstream 838 42411008 ~ 42411077 (+)
trnag-gcc_12 NA non-coding upstream 1002 42410843 ~ 42410913 (+)
trnag-gcc_11 NA non-coding upstream 1167 42410679 ~ 42410748 (+)
trnag-gcc_17 NA non-coding downstream 259 42412243 ~ 42412312 (+)
trnag-gcc_18 NA non-coding downstream 423 42412407 ~ 42412476 (+)
trnag-gcc_19 NA non-coding downstream 738 42412722 ~ 42412792 (+)
trnag-gcc_20 NA non-coding downstream 903 42412887 ~ 42412957 (+)
trnag-gcc_21 NA non-coding downstream 1068 42413052 ~ 42413122 (+)
gfra1 gfra1a,LOC108442611,LOC107568111,LOC107666504 other upstream 40334 42243811 ~ 42371581 (+)
LOC103046574 NA other upstream 1218706 41184961 ~ 41193209 (+)
LOC103045954 ypel5,slc30a10,LOC107568027,LOC108441457,LOC102788175,LOC102210471 other upstream 1338599 41065658 ~ 41073316 (+)
LOC103047655 NA other upstream 2059259 40349807 ~ 40352656 (+)
zfyve21 zfyve21 other upstream 2072263 40331073 ~ 40339652 (+)
G223269 NA other downstream 751297 43163281 ~ 43166134 (+)
G223335 micu1 other downstream 1199639 43611623 ~ 43615389 (+)
mcu mcu other downstream 1268167 43680151 ~ 43769000 (+)
mcph1 mcph1 other downstream 2484193 44896177 ~ 44947346 (+)
tmem14a tmem14a,LOC108425445 other downstream 2553712 44965696 ~ 44968097 (+)

Expression


Co-expression Network