trnag-gcc_20


Basic Information

Item Value
gene id trnag-gcc_20
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035921.1
NCBI id CM008324.1
chromosome length 46505145
location 42412887 ~ 42412957 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnag-gcc_20
GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTGCCACGCGGGAggcccgggttcgattcccggccaaTGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnag-gcc_20 True 71 tRNA 0.62 1 42412887 42412957

Neighbor

gene id symbol gene type direction distance location
LOC103043683 NA coding upstream 190833 42215743 ~ 42222054 (+)
LOC103042542 NA coding upstream 1118637 41287961 ~ 41294250 (+)
LOC103044280 NA coding upstream 1133809 41276985 ~ 41279078 (+)
LOC111195996 NA coding upstream 1214062 41195985 ~ 41198825 (+)
LOC111196049 NA coding upstream 1314059 41089502 ~ 41098828 (+)
LOC103047539 NA coding downstream 298503 42711460 ~ 42721934 (+)
fam204a fam204a coding downstream 361288 42774245 ~ 42802285 (+)
rab11fip2 rab11fip2 coding downstream 495548 42908505 ~ 42935835 (+)
LOC103028407 NA coding downstream 776403 43189360 ~ 43193440 (+)
LOC103043584 LOC108426108 coding downstream 887929 43300886 ~ 43310949 (+)
trnag-gcc_19 NA non-coding upstream 95 42412722 ~ 42412792 (+)
trnag-gcc_18 NA non-coding upstream 411 42412407 ~ 42412476 (+)
trnag-gcc_17 NA non-coding upstream 575 42412243 ~ 42412312 (+)
trnag-gcc_16 NA non-coding upstream 903 42411915 ~ 42411984 (+)
trnag-gcc_15 NA non-coding upstream 1230 42411587 ~ 42411657 (+)
trnag-gcc_21 NA non-coding downstream 95 42413052 ~ 42413122 (+)
trnag-gcc_22 NA non-coding downstream 260 42413217 ~ 42413286 (+)
trnag-gcc_23 NA non-coding downstream 424 42413381 ~ 42413450 (+)
trnag-gcc_24 NA non-coding downstream 590 42413547 ~ 42413617 (+)
trnag-gcc_25 NA non-coding downstream 1076 42414033 ~ 42414102 (+)
gfra1 gfra1a,LOC108442611,LOC107568111,LOC107666504 other upstream 41306 42243811 ~ 42371581 (+)
LOC103046574 NA other upstream 1219678 41184961 ~ 41193209 (+)
LOC103045954 ypel5,slc30a10,LOC107568027,LOC108441457,LOC102788175,LOC102210471 other upstream 1339571 41065658 ~ 41073316 (+)
LOC103047655 NA other upstream 2060231 40349807 ~ 40352656 (+)
zfyve21 zfyve21 other upstream 2073235 40331073 ~ 40339652 (+)
G223269 NA other downstream 750324 43163281 ~ 43166134 (+)
G223335 micu1 other downstream 1198666 43611623 ~ 43615389 (+)
mcu mcu other downstream 1267194 43680151 ~ 43769000 (+)
mcph1 mcph1 other downstream 2483220 44896177 ~ 44947346 (+)
tmem14a tmem14a,LOC108425445 other downstream 2552739 44965696 ~ 44968097 (+)

Expression


Co-expression Network