trnag-gcc_22


Basic Information

Item Value
gene id trnag-gcc_22
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035921.1
NCBI id CM008324.1
chromosome length 46505145
location 42413217 ~ 42413286 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnag-gcc_22
GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTGCCACGCGGAggcccgggttcgattcccggccaaTGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnag-gcc_22 True 70 tRNA 0.61 1 42413217 42413286

Neighbor

gene id symbol gene type direction distance location
LOC103043683 NA coding upstream 191163 42215743 ~ 42222054 (+)
LOC103042542 NA coding upstream 1118967 41287961 ~ 41294250 (+)
LOC103044280 NA coding upstream 1134139 41276985 ~ 41279078 (+)
LOC111195996 NA coding upstream 1214392 41195985 ~ 41198825 (+)
LOC111196049 NA coding upstream 1314389 41089502 ~ 41098828 (+)
LOC103047539 NA coding downstream 298174 42711460 ~ 42721934 (+)
fam204a fam204a coding downstream 360959 42774245 ~ 42802285 (+)
rab11fip2 rab11fip2 coding downstream 495219 42908505 ~ 42935835 (+)
LOC103028407 NA coding downstream 776074 43189360 ~ 43193440 (+)
LOC103043584 LOC108426108 coding downstream 887600 43300886 ~ 43310949 (+)
trnag-gcc_21 NA non-coding upstream 95 42413052 ~ 42413122 (+)
trnag-gcc_20 NA non-coding upstream 260 42412887 ~ 42412957 (+)
trnag-gcc_19 NA non-coding upstream 425 42412722 ~ 42412792 (+)
trnag-gcc_18 NA non-coding upstream 741 42412407 ~ 42412476 (+)
trnag-gcc_17 NA non-coding upstream 905 42412243 ~ 42412312 (+)
trnag-gcc_23 NA non-coding downstream 95 42413381 ~ 42413450 (+)
trnag-gcc_24 NA non-coding downstream 261 42413547 ~ 42413617 (+)
trnag-gcc_25 NA non-coding downstream 747 42414033 ~ 42414102 (+)
trnag-gcc_26 NA non-coding downstream 910 42414196 ~ 42414264 (+)
trnag-gcc_27 NA non-coding downstream 1074 42414360 ~ 42414429 (+)
gfra1 gfra1a,LOC108442611,LOC107568111,LOC107666504 other upstream 41636 42243811 ~ 42371581 (+)
LOC103046574 NA other upstream 1220008 41184961 ~ 41193209 (+)
LOC103045954 ypel5,slc30a10,LOC107568027,LOC108441457,LOC102788175,LOC102210471 other upstream 1339901 41065658 ~ 41073316 (+)
LOC103047655 NA other upstream 2060561 40349807 ~ 40352656 (+)
zfyve21 zfyve21 other upstream 2073565 40331073 ~ 40339652 (+)
G223269 NA other downstream 749995 43163281 ~ 43166134 (+)
G223335 micu1 other downstream 1198337 43611623 ~ 43615389 (+)
mcu mcu other downstream 1266865 43680151 ~ 43769000 (+)
mcph1 mcph1 other downstream 2482891 44896177 ~ 44947346 (+)
tmem14a tmem14a,LOC108425445 other downstream 2552410 44965696 ~ 44968097 (+)

Expression


Co-expression Network