CI01000009_02682050_02707583


Basic Information

Item Value
gene id CI01000009_02682050_02707583
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 2681608 ~ 2707623 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_02682050_02707583.mRNA
ACTCAACTTGTAGCTATTGAGCTACATATATGGCTCAATAATGACAGTGCTGAAGCTGAAAATCTCACTCTTCCCCAAAAAAGTTTCCATGGGGCCGTTTAGCGTGGTAAGAAGATGTATCAACAGGGAGACGGGTCAACAGTTTGCAGTGAAGATTGTGGATGTGGCCAAATTCACCTCCAGCCCTGGCCTCAGCACAGAGGATCTGAAGAGGGAAGCGAGCATTTGTCACATGCTGAAACATCCTCACATAGTGGAGCTTCTGGAGACCTACAGCTCTGATGGGATGCTCTACATGGTGTTTGAGTTTATGGATGGAGCAGATCTCTGCTTTGAGATTGTGAAGAGAGCAGATGCTGGTTTTGTTTACAGTGAGGCAGTAGCCAGTCACTACATGAGACAGATCCTAGAGGCGTTGCGGTACTGCCATGACAACAACATCATTCACCGGGATGTGAAGCCTGCAGCTGTCAATAGGAGGAAATTAAACATGAAATGAATATAGGATGATGACGATAAGTTGCTTAAGATCCAAATGCAGTGCAGTCATAACTCACAGCCTGTAGATGAAAATACAAAGATCAACCATGCTCACTGATCCTTAGGAAAAAAGCTTCAAAAGTGCTGCTGTGTTAATGAAAGCTGTTATAAAGTCAGTACATTTGGTTTATATTGAAGAAATATGCATGTTTTTTAACAACTTTATTCTCAGTATTTGGATTTGGCAGATATGAAACAGGCTATTGAATACAAACCTCAAAGATATAACAATACTTTTAAAACCTAAGAAATGTGACATATAACATTAAAAACTTAAACATGAAAATGAAATACCCTGCTACATTTATTTTTACTGCTCAAAATATGTTTTCTTACATAAATAATATAGGGTATTGATCAGACTTAATAATCACTGGTTTAATTACTGTGTTCAGAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_02682050_02707583.mRNA True 941 mRNA 0.39 6 2681608 2707623

Neighbor

gene id symbol gene type direction distance location
CI01000009_02654102_02655554 CASK coding downstream 25170 2654102 ~ 2656438 (-)
CI01000009_02610459_02610721 NA coding downstream 70887 2610260 ~ 2610721 (-)
CI01000009_02591882_02593586 RPL8.S, RPL8 coding downstream 87847 2591863 ~ 2593761 (-)
CI01000009_02403219_02417215 FAM160A2 coding downstream 264393 2403156 ~ 2417215 (-)
CI01000009_02391182_02393863 NA coding downstream 287745 2390445 ~ 2393863 (-)
CI01000009_02786421_02791586 NA coding upstream 78688 2786311 ~ 2792435 (-)
CI01000009_02844171_02861309 MAOB coding upstream 135388 2843011 ~ 2861309 (-)
CI01000009_02885473_02893975 NA coding upstream 177845 2883688 ~ 2893975 (-)
CI01000009_02904768_02914992 EFHC2 coding upstream 197068 2904691 ~ 2915247 (-)
CI01000009_02916137_02917550 FUNDC1 coding upstream 208018 2915641 ~ 2917550 (-)
G52406 NA non-coding downstream 102630 2574486 ~ 2578978 (-)
G52409 NA non-coding downstream 115044 2563762 ~ 2566564 (-)
G52440 NA non-coding downstream 167937 2512957 ~ 2513671 (-)
G52379 NA non-coding downstream 229968 2448366 ~ 2451640 (-)
G52378 NA non-coding downstream 253760 2427249 ~ 2427848 (-)
G52469 NA non-coding upstream 103422 2811045 ~ 2811334 (-)
G52478 NA non-coding upstream 115339 2822962 ~ 2823928 (-)
G52488 NA non-coding upstream 204682 2912305 ~ 2912542 (-)
G52489 NA non-coding upstream 205495 2913118 ~ 2913345 (-)
CI01000009_02975388_02982670 NA non-coding upstream 275972 2975388 ~ 2985391 (-)
G52410 NA other downstream 119075 2551724 ~ 2562533 (-)
G52098 NA other downstream 1273981 1401932 ~ 1407627 (-)
CI01000009_03261739_03262843 NA other upstream 553580 3261038 ~ 3262843 (-)
G52828 NA other upstream 1509797 4217420 ~ 4231469 (-)
G53515 NA other upstream 2794772 5502395 ~ 5505248 (-)
G55814 NA other upstream 5718198 8425821 ~ 8428012 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) AMCG00014711 NA coding CM030128.1 CM030128.1 28167033 ~ 28184530 (+)