trnag-gcc_43


Basic Information

Item Value
gene id trnag-gcc_43
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035921.1
NCBI id CM008324.1
chromosome length 46505145
location 42418269 ~ 42418339 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnag-gcc_43
GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTGCCACGCGGGAggcccgggttcgattcccggccaaTGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnag-gcc_43 True 71 tRNA 0.62 1 42418269 42418339

Neighbor

gene id symbol gene type direction distance location
LOC103043683 NA coding upstream 196215 42215743 ~ 42222054 (+)
LOC103042542 NA coding upstream 1124019 41287961 ~ 41294250 (+)
LOC103044280 NA coding upstream 1139191 41276985 ~ 41279078 (+)
LOC111195996 NA coding upstream 1219444 41195985 ~ 41198825 (+)
LOC111196049 NA coding upstream 1319441 41089502 ~ 41098828 (+)
LOC103047539 NA coding downstream 293121 42711460 ~ 42721934 (+)
fam204a fam204a coding downstream 355906 42774245 ~ 42802285 (+)
rab11fip2 rab11fip2 coding downstream 490166 42908505 ~ 42935835 (+)
LOC103028407 NA coding downstream 771021 43189360 ~ 43193440 (+)
LOC103043584 LOC108426108 coding downstream 882547 43300886 ~ 43310949 (+)
trnag-gcc_42 NA non-coding upstream 95 42418104 ~ 42418174 (+)
trnag-gcc_41 NA non-coding upstream 260 42417939 ~ 42418009 (+)
trnag-gcc_40 NA non-coding upstream 425 42417774 ~ 42417844 (+)
trnag-gcc_39 NA non-coding upstream 590 42417609 ~ 42417679 (+)
trnag-gcc_38 NA non-coding upstream 914 42417285 ~ 42417355 (+)
trnag-gcc_44 NA non-coding downstream 95 42418434 ~ 42418504 (+)
trnag-gcc_45 NA non-coding downstream 260 42418599 ~ 42418669 (+)
G223192 NA non-coding downstream 34510 42452849 ~ 42453237 (+)
trnag-gcc_46 NA non-coding downstream 44960 42463299 ~ 42463369 (+)
G223198 NA non-coding downstream 71244 42489583 ~ 42489875 (+)
gfra1 gfra1a,LOC108442611,LOC107568111,LOC107666504 other upstream 46688 42243811 ~ 42371581 (+)
LOC103046574 NA other upstream 1225060 41184961 ~ 41193209 (+)
LOC103045954 ypel5,slc30a10,LOC107568027,LOC108441457,LOC102788175,LOC102210471 other upstream 1344953 41065658 ~ 41073316 (+)
LOC103047655 NA other upstream 2065613 40349807 ~ 40352656 (+)
zfyve21 zfyve21 other upstream 2078617 40331073 ~ 40339652 (+)
G223269 NA other downstream 744942 43163281 ~ 43166134 (+)
G223335 micu1 other downstream 1193284 43611623 ~ 43615389 (+)
mcu mcu other downstream 1261812 43680151 ~ 43769000 (+)
mcph1 mcph1 other downstream 2477838 44896177 ~ 44947346 (+)
tmem14a tmem14a,LOC108425445 other downstream 2547357 44965696 ~ 44968097 (+)

Expression


Co-expression Network