G74199


Basic Information

Item Value
gene id G74199
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 16202524 ~ 16215525 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU100007
ATGACTCATTCACTTTTCACTTAGACACACATGAGGGAGGAGGGGTCTTCCTGGAAGTGGTTCCACTCTGCGTATTTCTAACATTCATTCTGTTCGGGTGAAGCAAGATCATGCAGGTGATAAGGGCCCTTCTTGGTACACTGGCACTTGCACTGTTCTGCCCATGCGTCAAGTGTGATTCAAAGCCAGCTGTGAGCACGGTGTGCCTCACCTTGCATGCAAACAGCCTGTCCCTCTCGGTCCGGCAAGCTGTGAGATGTCGTTCTTTTTGCTCCGGCACCACCATCGAGCTCCACACTCTCTTCTGTGCCTGCCTGCTTTTGCCTTTAGGGCTTTCCGAGGTGTGGCTGTAGCCAGACCTGTCCTCATTGTCTCTTGGGGGAGATAGCTCCCCATCTGCTCTGTACAAGGAACTCGTGCAGCTGGAGGGGGAGCTGCTCCTGGAGCTTCTGGCCTCCTTGTCCGTCACAGGGCTGTCCGCGCTCCTCTTGCAGGTCCGAGGGCTGTCCTCAGACACACAAGCGCTTGGCAGCACCCCCTGCGTTCTTTCGCATTTTGATTCCACCTCGCTGTCGACGTCCTCCTCGTCATCGCTGGCCAGCCAGTCAATGGAGTAGTCTGAATCTGAAGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU100007 True 632 lncRNA 0.55 2 16202524 16215525

Neighbor

gene id symbol gene type direction distance location
ca12 ca12 coding downstream 116890 16055056 ~ 16085634 (-)
man2c1 man2c1,LOC107682572 coding downstream 150947 16040065 ~ 16051577 (-)
sema7a NA coding downstream 175623 16014365 ~ 16026901 (-)
islr2 islr2,LOC107662462 coding downstream 218406 15979981 ~ 15984118 (-)
ccdc33 ccdc33 coding downstream 345863 15839686 ~ 15856661 (-)
dapk2 dapk2,dapk2b,LOC107752317,LOC107757761,LOC107659496,LOC107573357 coding upstream 41813 16257338 ~ 16313325 (-)
tbc1d2b tbc1d2b,LOC107698183,LOC102789207 coding upstream 102359 16317884 ~ 16350164 (-)
cib2 cib2,LOC103027299,LOC107573330,LOC107752320,LOC101476243 coding upstream 169024 16384549 ~ 16414345 (-)
acsbg1 NA coding upstream 231971 16447496 ~ 16457754 (-)
LOC103042575 LOC108433637 coding upstream 274122 16489647 ~ 16528087 (-)
G74091 usp3,LOC107659494 non-coding downstream 93799 16103616 ~ 16108725 (-)
LOC111193099 NA non-coding downstream 248711 15853302 ~ 15953813 (-)
G73910 NA non-coding downstream 558272 15643821 ~ 15644252 (-)
G73877 svip non-coding downstream 625026 15572334 ~ 15577498 (-)
G73870 NA non-coding downstream 674062 15448674 ~ 15528462 (-)
G74202 LOC108433646 non-coding upstream 3571 16219096 ~ 16222273 (-)
G74203 NA non-coding upstream 36967 16252492 ~ 16252752 (-)
G74205 NA non-coding upstream 70703 16286228 ~ 16292019 (-)
G74211 NA non-coding upstream 101420 16316945 ~ 16321653 (-)
G74265 NA non-coding upstream 292479 16508004 ~ 16508462 (-)
LOC103046265 pkp3 other downstream 421846 15758303 ~ 15780678 (-)
LOC103040324 NA other downstream 787911 15381329 ~ 15414613 (-)
LOC103037068 cpne8,LOC108274474,LOC107679956,LOC107752477,LOC107723993,LOC105026415,LOC106561599,LOC105028206 other downstream 988240 15123814 ~ 15214284 (-)
hbp1 hbp1,LOC107732286,LOC107701066 other downstream 1405241 14709058 ~ 14797283 (-)
LOC103025073 dynlrb2,LOC103025073,LOC106573385 other downstream 1656988 14542196 ~ 14545536 (-)
LOC103041134 rps27l,zgc:136826,LOC107752326,LOC107598918,LOC101156845 other upstream 251564 16467089 ~ 16470323 (-)
nrg4 NA other upstream 1661501 17877026 ~ 17885395 (-)
G74591 isl2,LOC105022634 other upstream 1767222 17982747 ~ 18029747 (-)
G74791 NA other upstream 2723649 18939174 ~ 18940464 (-)
LOC103034453 LOC108436916,LOC107753633,LOC107659484,LOC107573489,LOC107752304,LOC108181664,LOC107598834 other upstream 2777143 18992668 ~ 19008366 (-)

Expression


Co-expression Network