G74211


Basic Information

Item Value
gene id G74211
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 16316945 ~ 16321653 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU100025
tttttttttaaacattttttttttttcttacaaatcAGTATTAACATCCACATCAGTGTATTGGCtttatgtgtttgtatgtgtgtatgtatgtacgcATTCAGGTACCTTCATACTGTATCATGCAGGGCATGCAGTTCTGGTACACCAGCATTGCATGTTGTTTATTCCAAATAAGCAGATATGGTTTACTGCAAATTCTTGTATACATGGTTCAGAATATGTTTAATGTGCCTTGTTTACTTTTTATACGGAATGGCTAAAATAGCACTGTGTATTAAGTTGAATGAATAATGTTGTACTTGTGAAATATTTCAGGTTTTGCTCATGCAAATATCATATCCTTCATTCATCTGTCCCTGTTTCTGTATTCTGAGGCACTTATATCACTTTAGATTAGGGACCTACTCTCTTGGGACATATTTTACTTTAGGGAAGCTCACGATGCTACAGTATGTAAAACAAGTGGAGCAGTCAGGACTCCTGTCCTCGTGCACATGAAGTGTCTGAATGAAGAAAAGTCCTGTCTTCAGTAATGAGGTGGCACTTAGCTGCTGGAAACAAATATTGGACAATGCATATCATGCAGTCTGTCAGACCCAGCTGCTTATTTTCTGCTTGAGTGGCATTCCTTTGTTAGCGATCTGCTGCATTTGGACTAGTTTGAGTCCTCGAGTGTCAGGATTCCACCATTATATCCACTGCTGTTGGTGCCATGTGTGTTATCAGCGTGACACCCTGACATAGCTTTCTATCAGGACGATTAAGATAATTAACAGTTGTGGCCTAGAATTTCAGTTTATTGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU100025 True 807 lncRNA 0.38 2 16316945 16321653

Neighbor

gene id symbol gene type direction distance location
dapk2 dapk2,dapk2b,LOC107752317,LOC107757761,LOC107659496,LOC107573357 coding downstream 3620 16257338 ~ 16313325 (-)
ca12 ca12 coding downstream 231311 16055056 ~ 16085634 (-)
man2c1 man2c1,LOC107682572 coding downstream 265368 16040065 ~ 16051577 (-)
sema7a NA coding downstream 290044 16014365 ~ 16026901 (-)
islr2 islr2,LOC107662462 coding downstream 332827 15979981 ~ 15984118 (-)
cib2 cib2,LOC103027299,LOC107573330,LOC107752320,LOC101476243 coding upstream 62896 16384549 ~ 16414345 (-)
acsbg1 NA coding upstream 125843 16447496 ~ 16457754 (-)
LOC103042575 LOC108433637 coding upstream 167994 16489647 ~ 16528087 (-)
otud7a otud7a,si:dkey-37f18.2,LOC107715690,LOC107752330,LOC107659507,LOC107550219,LOC107698115,LOC107598848,LOC108275340 coding upstream 296498 16618151 ~ 16738665 (-)
bnip2 bnip2,LOC107703138 coding upstream 493263 16814916 ~ 16829981 (-)
G74205 NA non-coding downstream 24926 16286228 ~ 16292019 (-)
G74203 NA non-coding downstream 64193 16252492 ~ 16252752 (-)
G74202 LOC108433646 non-coding downstream 94672 16219096 ~ 16222273 (-)
G74199 NA non-coding downstream 101420 16202524 ~ 16215525 (-)
G74091 usp3,LOC107659494 non-coding downstream 208220 16103616 ~ 16108725 (-)
G74265 NA non-coding upstream 186351 16508004 ~ 16508462 (-)
G74285 NA non-coding upstream 319189 16640842 ~ 16641656 (-)
G74286 NA non-coding upstream 337850 16659503 ~ 16690357 (-)
G74295 NA non-coding upstream 421407 16743060 ~ 16747522 (-)
G74306 NA non-coding upstream 448789 16770442 ~ 16786039 (-)
LOC103046265 pkp3 other downstream 536267 15758303 ~ 15780678 (-)
LOC103040324 NA other downstream 902332 15381329 ~ 15414613 (-)
LOC103037068 cpne8,LOC108274474,LOC107679956,LOC107752477,LOC107723993,LOC105026415,LOC106561599,LOC105028206 other downstream 1102661 15123814 ~ 15214284 (-)
hbp1 hbp1,LOC107732286,LOC107701066 other downstream 1519662 14709058 ~ 14797283 (-)
LOC103025073 dynlrb2,LOC103025073,LOC106573385 other downstream 1771409 14542196 ~ 14545536 (-)
LOC103041134 rps27l,zgc:136826,LOC107752326,LOC107598918,LOC101156845 other upstream 145436 16467089 ~ 16470323 (-)
nrg4 NA other upstream 1555373 17877026 ~ 17885395 (-)
G74591 isl2,LOC105022634 other upstream 1661094 17982747 ~ 18029747 (-)
G74791 NA other upstream 2617521 18939174 ~ 18940464 (-)
LOC103034453 LOC108436916,LOC107753633,LOC107659484,LOC107573489,LOC107752304,LOC108181664,LOC107598834 other upstream 2671015 18992668 ~ 19008366 (-)

Expression


Co-expression Network