G74339 (anxa2,anxa2a,LOC108433632,LOC107739086,LOC107724175,LOC107659511,LOC107550215,LOC107598852)


Basic Information

Item Value
gene id G74339
gene name anxa2,anxa2a,LOC108433632,LOC107739086,LOC107724175,LOC107659511,LOC107550215,LOC107598852
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 16957657 ~ 16964382 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU100190
ataataatgcaaagaaaacaaaagttttaagagttcagaaatcaatatttggtggaataaccctggtcttcttggcatgttctcctccaccagtcttacacactgcttttggatatatTTATGGTGCAACTTCCTGATGCAAACttttaagcagtttagcttgatttTATGTGATCATCCCTTTCTtcctttcaatttggtaaaatcaaagaaacaaattttttcatcatttttaagtggtctctttctttttattccagagctgtatgtatataagtAGCTCACTGATATAAGATGTGCTGTACTATGTGTAATGTGCTGTAAGGTAAATTTGGCCTAACATGGCCTATTTTAATCAGTGAAAGATGGTTGGTTTCTACTTTCTCTGCAGTTCTCTAGAGTTCTTCTCTCCCtcagacaaaaacacacacacacacacacacacacacacacaccccatgGAGAGTACGGGCCCTGCTGGGGCTGCTTGTGTTCCTCCTCTATCAGAAATGCATTGTCAACGCTTTGGCGGCTCTCACCCTCAGAGACCACAAACTAAACAGCACAAAGCTCCAGTATAGGAGCCTATTTGTGCTATGCTAATCATCTTAGCTGGaggttaaattaacatttttaattaaaaaattagcaccaaacaaacacagcaaaacacactAATGAttaaaacatctaaataaaGCCGCGCGGCTTGAAAGGCAAAGCAGcatgaaaacactttttattgcCCCCATAAACTATGTCTGGGAAGGAGATTCCCATCCAAATAGACTTCCCTTCACTGGCAGATAATGTGGGGAGATGGATGGCGTGGCTGAAGCGTTATGTGATTATTATGTAAATGGCTTCGAAATGAATATGATGCCTGGTTTCCTTAAGTAACAAATCAGAGGGGCAAGTCTCTCTAATCAAAGCCTTTATTTGGCTGTACATGGAAGCagtgcatatttatatttcatcaTGAGCGCAGTAAGAAAACGTTTTctcatttctgaaaaaaaaaagaaaacttttttgcTCTTATTCCTTTTCGAAATGAGGGGATAAAATATGCAAATCGTATTTGAGATCAAATATTTTCacactatttATCAAAGCAAAGTGGGGAAAAAGTGAAGTAAAGCCTTAGCAGCAAGCAGAGCGATTCTTGAGTCTAATTAAAACAGAATAAGAAGAAACAAAGTCATGTGGTGCTCtactgctctctgctggactatTACAGATGCTGCACTCCTTCTAGATCTGCTGTAGATGAAGCAGcagctgctgatgatgatgataaagatgAGAATAATGTAGCAAAACattgtatataaagtaaaaatttAGATATGTGCATTAAAACTGGTCCCAAAATTCATATAAGCTTAATGACATAGGTCTGACCACTCAAATTCAAAAGTCAATACTTCAAACATGTTATATTGGCACGTTGAGATGTATTATCTACAGGATATCTTGACAGGACATTATACAATCCTTTTTGTGAGTCCAGTTTATTTATGACAGATCAGAGGCGTGGCCTTCATGACTTACGGTCCACTTCAGTCATCTCCACCACACAGACTCAGCAGAGCCGCCTGGTAGTCTCCTTTAGTGTGCTCAAGATGGTCTGGTACAGAGACTTCCCAAACTGGGCCTTGAACTCAGACCTGATCTTCTTCAGGTCCACCTCACAGCGAGACACCATGATCCTGGTCACCACCTTCTCCTTCGCTCCTTtactCTTCATGGCCTCACTGAGTCTGTTGGCGAAGTAGAGTTGTTTGTTTTCAAAGCACTGGACCAATGTAAGAAAAGACTTCTCCAGATCTCCTTTCACTTCCTTCCTGATGCTCTCCTGCATGTCATACGGGCTGTAGCTCTTGTATCTGTCGAACACTTTCTGCAGATGAGGGACACTCCTCTCTGTCATGATTGAGATCCAGGTTTTAACATCTGTGCCTTTCCTCTTCACTCCAGCTTCATACAGTGCTCTGGCATCTTCATCAATCTTCTCATAGTCAACTACACTGCTGGGCTCAGCCCTCTTGGCCTCCACTAGAGCCAGCAGCAGTTTAGCAAAGTCTCCTGATGTGTCTCCAGCCACATCCTTTTCCAATTCCTTCTTGAACAGTTCTCTGTAGACTTTCTTTATCTCCATCAGTTCAGCATTGCTCCGAGAGCAGACGATCTCAATCAGGCTCTCCTCATCTGTCCCCAAACCCTTAATAGAGGCTTTGATCTCAGAGGCATCATACTGAGCAGTGCTTTTCATCAGACCCAGAATGACTGTCTCCAGTGAGCCAGACAGTGCCGATTTGAGGGCAGAAATCATATCCTTCTTGGCTCTTCTCTCATATGCAAAGGCAATTTCCCGCCTTTGGGCATACGTCCGTTTGGTGAGGACCTGAATAATAGTCTGTTCATCCAcacCTTTGGTTTTGATAGCGGTCTCAATTCTGGCAGCATCTTTGTCAGGATCAAAGTCGGGTGCAGGAACCACAGTGGGGTAGGTGGGCTCGTTGtcCCCAAGGTTAAATGTGATTTGAC

Function

symbol description
anxa2a Predicted to enable calcium ion binding activity. Predicted to be located in basement membrane; extracellular region; and membrane. Predicted to be active in cytoplasm. Is expressed in several structures, including EVL; gill; integument; notochord; and periderm. Human ortholog(s) of this gene implicated in osteonecrosis. Orthologous to several human genes including ANXA2 (annexin A2).
anxa2 Enables several functions, including S100 protein binding activity; enzyme inhibitor activity; and phospholipid binding activity. Involved in several processes, including negative regulation of low-density lipoprotein particle receptor catabolic process; positive regulation of cellular component organization; and positive regulation of low-density lipoprotein particle clearance. Located in several cellular components, including bounding membrane of organelle; extracellular exosome; and lipid droplet. Part of AnxA2-p11 complex and PCSK9-AnxA2 complex. Colocalizes with membrane raft. Implicated in osteonecrosis. Biomarker of cholangiocarcinoma; invasive ductal carcinoma; pancreatic ductal carcinoma; and paranasal sinus benign neoplasm.

NR:

description
PREDICTED: annexin A2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU100190 True 2550 lncRNA 0.42 13 16957657 16964382

Neighbor

gene id symbol gene type direction distance location
foxb1 foxb1 coding upstream 59726 16895315 ~ 16897931 (+)
gcnt3 NA coding upstream 159037 16796943 ~ 16798620 (+)
LOC103024840 LOC108433634,LOC108274563 coding upstream 162685 16748290 ~ 16794972 (+)
LOC103042878 znf467,LOC108274922 coding upstream 365894 16563973 ~ 16591763 (+)
LOC103041748 rab8b,LOC108433638,LOC107598845,LOC107550224,LOC107659505,LOC107752325 coding upstream 469368 16474883 ~ 16488289 (+)
LOC103025470 tln2,LOC108433629,LOC107659514,LOC107703225,LOC107739102 coding downstream 720288 17684670 ~ 17806900 (+)
tpm1 tpm1,LOC107712528,LOC107659515,LOC107739081,LOC103141214,LOC103379363,LOC103149890,LOC108237348,LOC103040917,LOC108441842,LOC107589334 coding downstream 880719 17845101 ~ 17866128 (+)
lactb lactb,LOC107712527,LOC107659517,LOC107589333,LOC107557987 coding downstream 904181 17868563 ~ 17876239 (+)
tmem266 tmem266,LOC107557978 coding downstream 922926 17887308 ~ 17961661 (+)
isl2 isl2,isl2a,LOC107589357,LOC107662481,LOC107712508,LOC107688926 coding downstream 1015046 17979428 ~ 17986224 (+)
LOC111193101 NA non-coding upstream 70509 16831109 ~ 16887148 (+)
G74294 NA non-coding upstream 211262 16745859 ~ 16746395 (+)
LOC111193100 NA non-coding upstream 395869 16556002 ~ 16561788 (+)
G74247 NA non-coding upstream 434972 16522267 ~ 16522685 (+)
G74241 LOC108433637,LOC108274564,LOC107698134,LOC107715707 non-coding upstream 458319 16497035 ~ 16499338 (+)
G74335 rora,LOC108433630,LOC106561150,LOC107659510,LOC107598851 non-coding downstream 24646 16989028 ~ 17008539 (+)
G74413 NA non-coding downstream 512375 17476757 ~ 17476980 (+)
G74461 NA non-coding downstream 997314 17961696 ~ 17964775 (+)
G74471 scaper non-coding downstream 1030212 17994594 ~ 17995133 (+)
G74477 NA non-coding downstream 1151201 18115583 ~ 18182105 (+)
G74169 NA other upstream 669328 16286676 ~ 16288329 (+)
svip svip other upstream 1380124 15572302 ~ 15577533 (+)
rpgrip1l rpgrip1l other upstream 2036654 14891534 ~ 14921003 (+)
G73533 NA other upstream 2308106 14648829 ~ 14649551 (+)
LOC103043719 NA other upstream 4059726 12871484 ~ 12897931 (+)
G74649 NA other downstream 1490469 18454851 ~ 18455197 (+)
LOC103029914 scamp5,scamp5a,LOC108436905,LOC103363822,LOC107395508,LOC107703195 other downstream 1506322 18470704 ~ 18479345 (+)
G74832 NA other downstream 2118434 19082816 ~ 19085556 (+)
cadps2 NA other downstream 2175767 19140149 ~ 19322775 (+)
tmem17 tmem17,znf774,LOC107678976,LOC107753710 other downstream 2495576 19459958 ~ 19462187 (+)

Expression


Co-expression Network