G74407


Basic Information

Item Value
gene id G74407
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 17254917 ~ 17255289 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU100263
TAAATAGTGTAAGAGCACAAGGCCAgatgtgcttttattttaaaatcatttaagaCTGTTTACAACTAACCTGAGATGCAGTAACTTGTTAATTAAGTAAATAGTTAGACTTTATAAAAGTATGAAAGTTGGTTACTGAAAAACCTGAGAGCAAAAGGACACAtttactcattatttaaaaataattcaatacTGTTTATAAGTAGTCTAAGAGAAAAAGGTCAGATGTACTCTTATTTTGAAATCATTTAAGACCATTTACACTTAGCCTGAGATGCAGTAACTTGATAATTCAGTAaatagttatattt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU100263 True 311 lncRNA 0.28 2 17254917 17255289

Neighbor

gene id symbol gene type direction distance location
ice2 NA coding downstream 266427 16966782 ~ 16988490 (-)
LOC103044821 anxa2,LOC108433632,LOC107739086,LOC107724175,LOC107659511,LOC107550215 coding downstream 289357 16958574 ~ 16965560 (-)
bnip2 bnip2,LOC107703138 coding downstream 424936 16814916 ~ 16829981 (-)
otud7a otud7a,si:dkey-37f18.2,LOC107715690,LOC107752330,LOC107659507,LOC107550219,LOC107698115,LOC107598848,LOC108275340 coding downstream 516252 16618151 ~ 16738665 (-)
LOC103042575 LOC108433637 coding downstream 726830 16489647 ~ 16528087 (-)
LOC103045440 zgc:162595,LOC108433606,LOC108275248 coding upstream 332739 17588028 ~ 17600473 (-)
etfa etfa,LOC107712526,LOC107557988 coding upstream 706406 17961695 ~ 17975485 (-)
scaper scaper,LOC107712524,LOC107662441 coding upstream 735198 17990487 ~ 18110831 (-)
LOC103024839 ctdspl2a,LOC108275364,LOC107712523,LOC107688927,LOC107589331,LOC107557990,LOC107662443 coding upstream 861156 18116445 ~ 18123698 (-)
sqor sqrdl,LOC107662477,LOC107688928,LOC107589329,LOC105892492,LOC103363827 coding upstream 870498 18125787 ~ 18141692 (-)
G74368 NA non-coding downstream 453866 16797045 ~ 16801051 (-)
G74306 NA non-coding downstream 468878 16770442 ~ 16786039 (-)
G74295 NA non-coding downstream 507395 16743060 ~ 16747522 (-)
G74286 NA non-coding downstream 564560 16659503 ~ 16690357 (-)
G74285 NA non-coding downstream 613261 16640842 ~ 16641656 (-)
G74447 NA non-coding upstream 550046 17805335 ~ 17813965 (-)
G74556 tpm1,LOC108441842 non-coding upstream 589837 17845126 ~ 17866138 (-)
G74599 slc27a2,LOC108414297 non-coding upstream 963000 18218289 ~ 18227676 (-)
G74640 NA non-coding upstream 1095342 18350631 ~ 18350936 (-)
G74704 lamb1,lamb1a,LOC107662456,LOC107739090,LOC107595246 non-coding upstream 1346688 18601977 ~ 18607745 (-)
LOC103041134 rps27l,zgc:136826,LOC107752326,LOC107598918,LOC101156845 other downstream 784594 16467089 ~ 16470323 (-)
LOC103046265 pkp3 other downstream 1474239 15758303 ~ 15780678 (-)
LOC103040324 NA other downstream 1840304 15381329 ~ 15414613 (-)
LOC103037068 cpne8,LOC108274474,LOC107679956,LOC107752477,LOC107723993,LOC105026415,LOC106561599,LOC105028206 other downstream 2040633 15123814 ~ 15214284 (-)
hbp1 hbp1,LOC107732286,LOC107701066 other downstream 2457634 14709058 ~ 14797283 (-)
nrg4 NA other upstream 621737 17877026 ~ 17885395 (-)
G74591 isl2,LOC105022634 other upstream 727458 17982747 ~ 18029747 (-)
G74791 NA other upstream 1683885 18939174 ~ 18940464 (-)
LOC103034453 LOC108436916,LOC107753633,LOC107659484,LOC107573489,LOC107752304,LOC108181664,LOC107598834 other upstream 1737379 18992668 ~ 19008366 (-)
G74838 wasl,LOC105896696,LOC108275301 other upstream 1815649 19070938 ~ 19072888 (-)

Expression


Co-expression Network