G74413



Basic Information


Item Value
gene id G74413
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 17476757 ~ 17476980 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence


>TU100269
gagagacagacaacagtggaaggtgcaaagaccgacggagacaaagtggcagaggagggctatttaaagaaacaggaaacacactataattagaaacacctggggaaggggcggagctacaaatgagacacaggtggaaaagtactgagacgggagacacaggggagcacaggtcacgtggggaagacacacagagacacgagacgaggccaagacgtgacaag

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU100269 True 224 lncRNA 0.52 1 17476757 17476980

Neighbor


gene id symbol gene type direction distance location
foxb1 foxb1 coding upstream 578826 16895315 ~ 16897931 (+)
gcnt3 NA coding upstream 678137 16796943 ~ 16798620 (+)
LOC103024840 LOC108433634,LOC108274563 coding upstream 681785 16748290 ~ 16794972 (+)
LOC103042878 znf467,LOC108274922 coding upstream 884994 16563973 ~ 16591763 (+)
LOC103041748 rab8b,LOC108433638,LOC107598845,LOC107550224,LOC107659505,LOC107752325 coding upstream 988468 16474883 ~ 16488289 (+)
LOC103025470 tln2,LOC108433629,LOC107659514,LOC107703225,LOC107739102 coding downstream 207690 17684670 ~ 17806900 (+)
tpm1 tpm1,LOC107712528,LOC107659515,LOC107739081,LOC103141214,LOC103379363,LOC103149890,LOC108237348,LOC103040917,LOC108441842,LOC107589334 coding downstream 368121 17845101 ~ 17866128 (+)
lactb lactb,LOC107712527,LOC107659517,LOC107589333,LOC107557987 coding downstream 391583 17868563 ~ 17876239 (+)
tmem266 tmem266,LOC107557978 coding downstream 410328 17887308 ~ 17961661 (+)
isl2 isl2,isl2a,LOC107589357,LOC107662481,LOC107712508,LOC107688926 coding downstream 502448 17979428 ~ 17986224 (+)
G74335 rora,LOC108433630,LOC106561150,LOC107659510,LOC107598851 non-coding upstream 468218 16989028 ~ 17008539 (+)
G74339 anxa2,anxa2a,LOC108433632,LOC107739086,LOC107724175,LOC107659511,LOC107550215,LOC107598852 non-coding upstream 512375 16957657 ~ 16964382 (+)
LOC111193101 NA non-coding upstream 589609 16831109 ~ 16887148 (+)
G74294 NA non-coding upstream 730362 16745859 ~ 16746395 (+)
LOC111193100 NA non-coding upstream 914969 16556002 ~ 16561788 (+)
G74461 NA non-coding downstream 484716 17961696 ~ 17964775 (+)
G74471 scaper non-coding downstream 517614 17994594 ~ 17995133 (+)
G74477 NA non-coding downstream 638603 18115583 ~ 18182105 (+)
G74494 ctdspl2a,LOC108411888,LOC108275364,LOC107557990,LOC107739078,LOC107662443,LOC107589331 non-coding downstream 643629 18120609 ~ 18123835 (+)
G74479 NA non-coding downstream 700715 18177695 ~ 18179770 (+)
G74169 NA other upstream 1188428 16286676 ~ 16288329 (+)
svip svip other upstream 1899224 15572302 ~ 15577533 (+)
rpgrip1l rpgrip1l other upstream 2555754 14891534 ~ 14921003 (+)
G73533 NA other upstream 2827206 14648829 ~ 14649551 (+)
LOC103043719 NA other upstream 4578826 12871484 ~ 12897931 (+)
G74649 NA other downstream 977871 18454851 ~ 18455197 (+)
LOC103029914 scamp5,scamp5a,LOC108436905,LOC103363822,LOC107395508,LOC107703195 other downstream 993724 18470704 ~ 18479345 (+)
G74832 NA other downstream 1605836 19082816 ~ 19085556 (+)
cadps2 NA other downstream 1663169 19140149 ~ 19322775 (+)
tmem17 tmem17,znf774,LOC107678976,LOC107753710 other downstream 1982978 19459958 ~ 19462187 (+)

Expression



Co-expression Network