G74672


Basic Information

Item Value
gene id G74672
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 18625071 ~ 18626410 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU100608
CGTGGCGAGGGCGCGGTAAAGCTGGTTCCAGCTCTGCATTTTGTCCGTGTCCTGAACACAGATCACAGCTTCACCTACAGCAGCACTCTGCGCGTCCAAGGACTCGGCACTTCGCGCCTGCGCACAACGGCCTCAGCTGAGGAGGAGATCTGTCGCGCGCTAAACGCGTCAAACGTTACTCAATCCAGCTGCATCTGGAGCAGGcccccagcttttcccttccaaaacgtgccaccggaagtgtgctgctgagggatgagaggaccatttgagcaaagctatccattcacttccattcatttcggggtgtctttgaaccaataataaatgtatttccaagccgttttcgattatgacacggcctgtgttcttttctacaaagaacagattttctgtcatttgatccataagattaataatctgttcatagctttagaaaataacatttttatacaactatGCTAACGATGATGTAAAAAGACAGCGACCCAAAATAccgtgctgtaatgtttggagaagttgctcctcaaaatttaaaagtacagagctgattgaattagagcagggtcaaagtaacctcttattatgcaaatataatactactactaacagttataatacattgtagata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU100608 True 631 lncRNA 0.44 2 18625071 18626410

Neighbor

gene id symbol gene type direction distance location
LOC103026996 lamb1,lamb1a,LOC107662456,LOC107595246 coding upstream 9950 18577789 ~ 18615121 (+)
LOC103026700 lamb4 coding upstream 49704 18535874 ~ 18575367 (+)
LOC103030871 NA coding upstream 100896 18514747 ~ 18524175 (+)
ubl7 ubl7a,ubl7,LOC108436908,LOC108274434,LOC107703185 coding upstream 111756 18506606 ~ 18513315 (+)
LOC103030240 LOC103030240,LOC108436888 coding upstream 128616 18484454 ~ 18496455 (+)
LOC103027288 NA coding downstream 5893 18632303 ~ 18634947 (+)
LOC103032021 NA coding downstream 10834 18637244 ~ 18644079 (+)
LOC103032349 znf800 coding downstream 26866 18653276 ~ 18668460 (+)
LOC103033497 grm8,grm8b,LOC107659486,LOC107698172,LOC107598887 coding downstream 45991 18672401 ~ 18838757 (+)
pot1 NA coding downstream 266817 18893227 ~ 18937127 (+)
G74668 NA non-coding upstream 90941 18533808 ~ 18534130 (+)
G74654 NA non-coding upstream 162435 18461444 ~ 18462636 (+)
G74535 LOC108436883 non-coding upstream 249532 18371716 ~ 18375539 (+)
G74510 NA non-coding upstream 411710 18211912 ~ 18213361 (+)
G74479 NA non-coding upstream 445301 18177695 ~ 18179770 (+)
G74714 NA non-coding downstream 1239 18627649 ~ 18628028 (+)
LOC111193102 NA non-coding downstream 76311 18702721 ~ 18703887 (+)
G74770 NA non-coding downstream 331228 18957638 ~ 18970866 (+)
G74810 NA non-coding downstream 366268 18992678 ~ 18994863 (+)
G74831 NA non-coding downstream 455902 19082312 ~ 19082521 (+)
LOC103029914 scamp5,scamp5a,LOC108436905,LOC103363822,LOC107395508,LOC107703195 other upstream 145726 18470704 ~ 18479345 (+)
G74649 NA other upstream 169874 18454851 ~ 18455197 (+)
G74169 NA other upstream 2336742 16286676 ~ 16288329 (+)
svip svip other upstream 3047538 15572302 ~ 15577533 (+)
rpgrip1l rpgrip1l other upstream 3704068 14891534 ~ 14921003 (+)
G74832 NA other downstream 456406 19082816 ~ 19085556 (+)
cadps2 NA other downstream 513739 19140149 ~ 19322775 (+)
tmem17 tmem17,znf774,LOC107678976,LOC107753710 other downstream 833548 19459958 ~ 19462187 (+)
LOC103044129 NA other downstream 900802 19527212 ~ 19537617 (+)
LOC103028745 NA other downstream 1577209 20203619 ~ 20207955 (+)

Expression


Co-expression Network