G74770


Basic Information

Item Value
gene id G74770
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 18957638 ~ 18970866 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU100720
gtgaagtgtgacaAATTATAGGTAAACCTGGAAACAATATTCAGAGCGAGAGGTGCATAACACGGCTCCCCTGTGTAGCACGCACAGTCAAACCTCTCCTGAAACCAATCGACGTCCTCCTGTGAGATCTGACCCTTCACAAACAGCCCACTCGTGCTGTCCTTGTAGATTTGATACCTCTGTGGAGACAAGTGAAGATACTCTCCACTGTCCCAGATCCTCCTCACACACCTGCCCTTACCCTGACACAGGGCTTCACTGCACAGCTGTGTGGCAGTGGTCACATTTAAGATGTATGGGTTCATGACTTCTTTTAGGTGGTGTTTTGCAGCTGCACAGGACAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU100720 True 344 lncRNA 0.49 2 18957638 18970866

Neighbor

gene id symbol gene type direction distance location
gpr37 gpr37,gpr37a,LOC107753714,LOC107698235,LOC106584563 coding upstream 7290 18939095 ~ 18950348 (+)
pot1 NA coding upstream 20511 18893227 ~ 18937127 (+)
LOC103033497 grm8,grm8b,LOC107659486,LOC107698172,LOC107598887 coding upstream 118881 18672401 ~ 18838757 (+)
LOC103032349 znf800 coding upstream 289178 18653276 ~ 18668460 (+)
LOC103032021 NA coding upstream 313559 18637244 ~ 18644079 (+)
LOC103034777 wasl,wasla,LOC108275301,LOC107598884,LOC107659464 coding downstream 85921 19056787 ~ 19081399 (+)
iqub iqub coding downstream 127650 19098516 ~ 19114949 (+)
slc13a1 slc13a1 coding downstream 148681 19119547 ~ 19133880 (+)
fezf1 fezf1,fezf2,LOC102788291 coding downstream 359385 19330251 ~ 19334337 (+)
aass aass,LOC107698474,LOC107752301,LOC107753626,LOC107678990 coding downstream 370414 19341280 ~ 19362921 (+)
LOC111193102 NA non-coding upstream 253751 18702721 ~ 18703887 (+)
G74714 NA non-coding upstream 329610 18627649 ~ 18628028 (+)
G74672 NA non-coding upstream 331228 18625071 ~ 18626410 (+)
G74668 NA non-coding upstream 423508 18533808 ~ 18534130 (+)
G74654 NA non-coding upstream 495002 18461444 ~ 18462636 (+)
G74810 NA non-coding downstream 21812 18992678 ~ 18994863 (+)
G74831 NA non-coding downstream 111446 19082312 ~ 19082521 (+)
G74833 NA non-coding downstream 114937 19085803 ~ 19086231 (+)
G74951 fnbp4,LOC107598873,LOC107681673 non-coding downstream 507132 19477998 ~ 19481987 (+)
G74958 kiaa1033 non-coding downstream 536252 19507118 ~ 19510980 (+)
LOC103029914 scamp5,scamp5a,LOC108436905,LOC103363822,LOC107395508,LOC107703195 other upstream 478293 18470704 ~ 18479345 (+)
G74649 NA other upstream 502441 18454851 ~ 18455197 (+)
G74169 NA other upstream 2669309 16286676 ~ 16288329 (+)
svip svip other upstream 3380105 15572302 ~ 15577533 (+)
rpgrip1l rpgrip1l other upstream 4036635 14891534 ~ 14921003 (+)
G74832 NA other downstream 111950 19082816 ~ 19085556 (+)
cadps2 NA other downstream 169283 19140149 ~ 19322775 (+)
tmem17 tmem17,znf774,LOC107678976,LOC107753710 other downstream 489092 19459958 ~ 19462187 (+)
LOC103044129 NA other downstream 556346 19527212 ~ 19537617 (+)
LOC103028745 NA other downstream 1232753 20203619 ~ 20207955 (+)

Expression


Co-expression Network