G74804


Basic Information

Item Value
gene id G74804
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 18984195 ~ 18986193 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU100767
ACTGCagaagcgccctctagcgggcccgccggcgggcccgttctgactatgtaaattAGAACGCTTAAaagcgtcaaatattctaaacatacCGACCAACTAACCAACTCATATTCATTAGTActactttaactacctgcatgcaaatttacagccatctacatgaaaccagtcgccagaaatctccaactgaaaacagcctgttttttcacattgtttacacgagaaacacgcctccccaacaaaatagccttataaaataatattagtgtataaaataacatcatattatattattgaaaattcacttactatcacagcatccac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU100767 True 327 lncRNA 0.39 2 18984195 18986193

Neighbor

gene id symbol gene type direction distance location
LOC103027908 NA coding downstream 7030 18975308 ~ 18977165 (-)
LOC103034129 NA coding downstream 10882 18970412 ~ 18973313 (-)
dld dld coding downstream 359000 18619136 ~ 18625195 (-)
parp16 parp16,LOC107662480,LOC107589319,LOC107595248 coding downstream 516082 18461375 ~ 18468113 (-)
LOC103028541 apba2,LOC108436900,LOC105892347,LOC106584731,LOC106530680,LOC103462423 coding downstream 535640 18430338 ~ 18448555 (-)
LOC103035727 hyal6,LOC108436892,LOC107698319,LOC107752305,LOC105896038,LOC107573512,LOC106561028 coding upstream 37497 19023690 ~ 19046218 (-)
LOC103036047 NA coding upstream 94955 19081148 ~ 19086198 (-)
asb15 asb15 coding upstream 100700 19086893 ~ 19095789 (-)
ptprz1 ptprz1 coding upstream 378405 19364598 ~ 19437614 (-)
LOC103041446 LOC108436924 coding upstream 476164 19462357 ~ 19473042 (-)
G74796 NA non-coding downstream 16285 18960804 ~ 18967910 (-)
G74792 gpr37,gpr37a,LOC107753714,LOC107598835,LOC105006086,LOC107752307,LOC107698235 non-coding downstream 34079 18948629 ~ 18950116 (-)
G74740 NA non-coding downstream 334424 18649439 ~ 18649771 (-)
G74735 NA non-coding downstream 344010 18637263 ~ 18640185 (-)
G74716 NA non-coding downstream 354790 18629061 ~ 18629405 (-)
G74910 NA non-coding upstream 293459 19279652 ~ 19341936 (-)
G74915 NA non-coding upstream 301147 19287340 ~ 19290287 (-)
G74928 NA non-coding upstream 339199 19325392 ~ 19418804 (-)
G74909 aass,LOC107753626,LOC107678990,LOC107752301,LOC107698474 non-coding upstream 358752 19344945 ~ 19350011 (-)
G74911 aass,LOC102787118 non-coding upstream 367900 19354093 ~ 19355051 (-)
G74791 NA other downstream 43731 18939174 ~ 18940464 (-)
G74591 isl2,LOC105022634 other downstream 954448 17982747 ~ 18029747 (-)
nrg4 NA other downstream 1098800 17877026 ~ 17885395 (-)
LOC103041134 rps27l,zgc:136826,LOC107752326,LOC107598918,LOC101156845 other downstream 2513872 16467089 ~ 16470323 (-)
LOC103046265 pkp3 other downstream 3203517 15758303 ~ 15780678 (-)
LOC103034453 LOC108436916,LOC107753633,LOC107659484,LOC107573489,LOC107752304,LOC108181664,LOC107598834 other upstream 6475 18992668 ~ 19008366 (-)
G74838 wasl,LOC105896696,LOC108275301 other upstream 84745 19070938 ~ 19072888 (-)
G75100 LOC108436948,LOC108275266 other upstream 873501 19859694 ~ 19865982 (-)
G75207 api5,LOC107696269,LOC107753602 other upstream 1040969 20027162 ~ 20032027 (-)
hsd17b12 hsd17b12,hsd17b12a,LOC107661451,LOC107696265,LOC107573907,LOC107716735,LOC107753600 other upstream 1098235 20084428 ~ 20100250 (-)

Expression


Co-expression Network