G74838 (wasl,LOC105896696,LOC108275301)


Basic Information

Item Value
gene id G74838
gene name wasl,LOC105896696,LOC108275301
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 19070938 ~ 19072888 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU100809
CAAAACCTTAAAATTCTACTGAACATTAGGAAATTTTCCCAGACTCAGACAGTATAGAAGATATAAGGTTTCTGTGTGGcagaaattatataaaaagttattttgccaaaaaaaaaaaaaaagataggtGCTGTGCTTTAAATCTGCTCCGAGTGATCAGACCTGTCTTTGTTTTAAATCCATGGTTTTGTTCTGTTTAcgccatttatttttattatcctGATTCTGAAGATGAAGTGACAAGGTAATAAATTAATTAGGAGGTTTATACATGCATGCTTTAGTGACTGCTTACCTTGCCTCCTCAGTTCGTTTTTAACAGCCTCCACACCTCCCTTCTTCTCAATGAAGTCATAAATCACTTTAGATGTCTCTTTGTCTTTCAGCTGAGCTTCAGAGATGCCACACATGTCAAACAGAATTTTCAGCTCTGGGTCCAGATTATTCAGATCGAAGCCTGTGTTCGGATCCCAGCCCACATGGCCAATGTGCTGGAAGTTGCTTGGGGTCCCAATATCAGCCTTCGTCAGTTTCTTCCTCTTGCCCTTcaccttcttctccttcttgttAAAGCTACTGTGCACCATGTTGTTCATGTGGGAATTGTGGAAGCGCACATTGTTTATCTCCGGGTTCTTGATGTCCACCGTCGCCATTGGCAACGTGGGTCCTGGAcatagcaaataaaaaaaacaaaaaaaaaaacacaaagcaaaaggCAGCCGTTAGCTAGAACCGTAGAATCATTATCACCGTTATAAATACTGCTGGGCATGTAGAGAATACTGCTTGCTTGCCGAG

Function

symbol description
wasl Predicted to enable identical protein binding activity. Involved in several processes, including actin filament polymerization; negative regulation of lymphocyte migration; and negative regulation of membrane tubulation. Located in cytosol and nucleus.

NR:

description
PREDICTED: neural Wiskott-Aldrich syndrome protein isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU100809 True 801 TUCP 0.40 3 19070938 19072888

Neighbor

gene id symbol gene type direction distance location
LOC103035727 hyal6,LOC108436892,LOC107698319,LOC107752305,LOC105896038,LOC107573512,LOC106561028 coding downstream 24720 19023690 ~ 19046218 (-)
LOC103028224 NA coding downstream 83880 18978848 ~ 18987058 (-)
LOC103027908 NA coding downstream 93773 18975308 ~ 18977165 (-)
LOC103034129 NA coding downstream 97625 18970412 ~ 18973313 (-)
dld dld coding downstream 445743 18619136 ~ 18625195 (-)
LOC103036047 NA coding upstream 8260 19081148 ~ 19086198 (-)
asb15 asb15 coding upstream 14005 19086893 ~ 19095789 (-)
ptprz1 ptprz1 coding upstream 291710 19364598 ~ 19437614 (-)
LOC103041446 LOC108436924 coding upstream 389469 19462357 ~ 19473042 (-)
fnbp4 fnbp4,LOC107681673,LOC107753624,LOC107678983 coding upstream 402662 19475550 ~ 19485147 (-)
G74804 NA non-coding downstream 84745 18984195 ~ 18986193 (-)
G74796 NA non-coding downstream 103028 18960804 ~ 18967910 (-)
G74792 gpr37,gpr37a,LOC107753714,LOC107598835,LOC105006086,LOC107752307,LOC107698235 non-coding downstream 120822 18948629 ~ 18950116 (-)
G74740 NA non-coding downstream 421167 18649439 ~ 18649771 (-)
G74735 NA non-coding downstream 430753 18637263 ~ 18640185 (-)
G74910 NA non-coding upstream 206764 19279652 ~ 19341936 (-)
G74915 NA non-coding upstream 214452 19287340 ~ 19290287 (-)
G74928 NA non-coding upstream 252504 19325392 ~ 19418804 (-)
G74909 aass,LOC107753626,LOC107678990,LOC107752301,LOC107698474 non-coding upstream 272057 19344945 ~ 19350011 (-)
G74911 aass,LOC102787118 non-coding upstream 281205 19354093 ~ 19355051 (-)
LOC103034453 LOC108436916,LOC107753633,LOC107659484,LOC107573489,LOC107752304,LOC108181664,LOC107598834 other downstream 62572 18992668 ~ 19008366 (-)
G74791 NA other downstream 130474 18939174 ~ 18940464 (-)
G74591 isl2,LOC105022634 other downstream 1041191 17982747 ~ 18029747 (-)
nrg4 NA other downstream 1185543 17877026 ~ 17885395 (-)
LOC103041134 rps27l,zgc:136826,LOC107752326,LOC107598918,LOC101156845 other downstream 2600615 16467089 ~ 16470323 (-)
G75100 LOC108436948,LOC108275266 other upstream 786806 19859694 ~ 19865982 (-)
G75207 api5,LOC107696269,LOC107753602 other upstream 954274 20027162 ~ 20032027 (-)
hsd17b12 hsd17b12,hsd17b12a,LOC107661451,LOC107696265,LOC107573907,LOC107716735,LOC107753600 other upstream 1011540 20084428 ~ 20100250 (-)
LOC103032014 maf,LOC108428434,LOC108274756,LOC102790406,LOC102298902,LOC101477682,LOC102192535,LOC101173775,LOC100702616,LOC107663990,LOC107565340 other upstream 1549753 20622641 ~ 20748208 (-)
gatd1 pddc1,LOC102788149 other upstream 1992431 21065319 ~ 21071246 (-)

Expression


Co-expression Network