G74911 (aass,LOC102787118)


Basic Information

Item Value
gene id G74911
gene name aass,LOC102787118
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 19354093 ~ 19355051 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU100916
tttttcattaatgtaatagtttaaaatatttaataagttgtttgatgatctgaaccATTTAAGAGaaatatgcaaagaaaataGTACATCATGAAGAAGGCAAACACTGTTTCACACTGCTGAAATAGTAAAAGATTAATCAAAATGAAGAGATGAGAGCAACAGTCCATGCCTGATCACTAGGTCATGGTCTTTGACCAAAGACTCAAGATGGCCCTCTTGGCTAGACACATCGAGCATCACAGGTATGGTGTTGGGGTAAAGGGCAGCCAGTTCCTCTGCCtggctcagtaacactgaggCCACTGTGACCTGAGTGGCAACATCCCTGGTGAGATATTCAATGACTGGCCCGGACACATAGCCAGATCCTAACAGCAGCACACGCTTCATCCCGCCTTTCTTCAGGATCTGCTCAGACTCCCTGCGAGACAGATGGTACAACCATTACTAATGAtatacaaacagacaaacacacacagaaagacaaAGACACAGACGTACCaactaaaatgtgaaactactgatttaaagtaaatcacAACACACCACAGACAGCAAGGGAGAAgacactctttttttctgtcatatCAGCCTAATGAGGCATACCTATACTCGTacctaaattattaaaaaaatttaataataattgatttGGAATAATAAGGACTAAACTCTAGCATAATCttagttttttaatactaaCACTTTCGATTGAGGACCGACATAAAAATACccttttatgccactgatataatgacaatacagtagcataataatgcttttaCGCTTTACTTTCAAAGaccaaataattttaataattaagaatattc

Function

symbol description
aass Predicted to enable saccharopine dehydrogenase activity. Predicted to be involved in lysine biosynthetic process via aminoadipic acid. Predicted to be active in cytoplasm. Human ortholog(s) of this gene implicated in hyperlysinemia. Orthologous to human AASS (aminoadipate-semialdehyde synthase).

NR:

description
PREDICTED: alpha-aminoadipic semialdehyde synthase, mitochondrial isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU100916 True 833 lncRNA 0.37 2 19354093 19355051

Neighbor

gene id symbol gene type direction distance location
asb15 asb15 coding downstream 258304 19086893 ~ 19095789 (-)
LOC103036047 NA coding downstream 267895 19081148 ~ 19086198 (-)
LOC103035727 hyal6,LOC108436892,LOC107698319,LOC107752305,LOC105896038,LOC107573512,LOC106561028 coding downstream 307875 19023690 ~ 19046218 (-)
LOC103028224 NA coding downstream 367035 18978848 ~ 18987058 (-)
LOC103027908 NA coding downstream 376928 18975308 ~ 18977165 (-)
ptprz1 ptprz1 coding upstream 9547 19364598 ~ 19437614 (-)
LOC103041446 LOC108436924 coding upstream 107306 19462357 ~ 19473042 (-)
fnbp4 fnbp4,LOC107681673,LOC107753624,LOC107678983 coding upstream 120499 19475550 ~ 19485147 (-)
lrrc10 lrrc10 coding upstream 132072 19487123 ~ 19488636 (-)
washc4 kiaa1033,si:dkey-23p11.2,LOC107678984,LOC107696292 coding upstream 149999 19505050 ~ 19525749 (-)
G74909 aass,LOC107753626,LOC107678990,LOC107752301,LOC107698474 non-coding downstream 4082 19344945 ~ 19350011 (-)
G74910 NA non-coding downstream 12157 19279652 ~ 19341936 (-)
G74915 NA non-coding downstream 63806 19287340 ~ 19290287 (-)
G74804 NA non-coding downstream 367900 18984195 ~ 18986193 (-)
G74796 NA non-coding downstream 386183 18960804 ~ 18967910 (-)
G75069 NA non-coding upstream 285770 19640821 ~ 19688118 (-)
G75081 NA non-coding upstream 390513 19745564 ~ 19746445 (-)
G75092 NA non-coding upstream 444334 19799385 ~ 19799625 (-)
G75093 NA non-coding upstream 449715 19804766 ~ 19804970 (-)
G75106 NA non-coding upstream 516091 19871142 ~ 19872681 (-)
G74838 wasl,LOC105896696,LOC108275301 other downstream 281205 19070938 ~ 19072888 (-)
LOC103034453 LOC108436916,LOC107753633,LOC107659484,LOC107573489,LOC107752304,LOC108181664,LOC107598834 other downstream 345727 18992668 ~ 19008366 (-)
G74791 NA other downstream 413629 18939174 ~ 18940464 (-)
G74591 isl2,LOC105022634 other downstream 1324346 17982747 ~ 18029747 (-)
nrg4 NA other downstream 1468698 17877026 ~ 17885395 (-)
G75100 LOC108436948,LOC108275266 other upstream 504643 19859694 ~ 19865982 (-)
G75207 api5,LOC107696269,LOC107753602 other upstream 672111 20027162 ~ 20032027 (-)
hsd17b12 hsd17b12,hsd17b12a,LOC107661451,LOC107696265,LOC107573907,LOC107716735,LOC107753600 other upstream 729377 20084428 ~ 20100250 (-)
LOC103032014 maf,LOC108428434,LOC108274756,LOC102790406,LOC102298902,LOC101477682,LOC102192535,LOC101173775,LOC100702616,LOC107663990,LOC107565340 other upstream 1267590 20622641 ~ 20748208 (-)
gatd1 pddc1,LOC102788149 other upstream 1710268 21065319 ~ 21071246 (-)

Expression


Co-expression Network