G75081


Basic Information

Item Value
gene id G75081
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 19745564 ~ 19746445 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU101183
TATGTGACATTGTATGACATTTGCTTGACATACAGTTTGCTTGACAAACAGTATGAACAGTAGGGACAAATGGATATTATGacaaaatgtattgttataatAAATTGCATCGCATTATGTAACTCTTTTTTTCTAGACTTTATGGAAGCTGTCAGTGCTTAGTCCTGTGTAAATTGATAAAGTGCAGCTTTTTTCAACATGCTTAACCTCAACAAAAATTGATGCATATtgaaaaaaaggcatttttgtCTGAATGGAAGGCCAAATAGCAGTACAAAACAAAGTCAAATGTATTCCTAAAGCACATTTCAAACAACTCTGTTGACAAAAGTGCTCTCTATtagaatttaaaacaaaaagaaaacaacacagaacaatgcaaaaccagaacaaatcaaatcaaattacatcaaatcaaattacataaaaagctaaGATATAAAAATGAGATTTAAGACGAGATTTAAAACTTGACACCCGCGGGGGCTAGTCTGACGTGTAAAGGCAGTTCATTTTACAATTTGGCTTCTGAAGGTCAGAAAGATGGGTTGGAGCTAGATCATTTAAAGacttgttaaaaaatattaagatcTTAAAATCTATCCTGAAATGTACAGGAAGCCAGTGAAGCGCAGCCAGTACTGGAGAAATGTTCTCTCACTTCcaagacttaaattaaataaaggctCTTTATACCTGTAATAAGATATTTTAAACTCACTCATCATACATATCACTAGTTCTTTATGGGACCCAAAGTGGTTGTTCAGCCTTGCTCAGAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU101183 True 784 lncRNA 0.33 2 19745564 19746445

Neighbor

gene id symbol gene type direction distance location
LOC103030119 hcn4,LOC108436942,LOC107696280,LOC107573709,LOC106530001 coding downstream 20015 19692184 ~ 19725549 (-)
LOC103047267 parp6,parp6b,LOC108436940,LOC108275327,LOC107753615,LOC107661437 coding downstream 85302 19643325 ~ 19660262 (-)
LOC103046970 NA coding downstream 107912 19635125 ~ 19637652 (-)
LOC103046663 cox5aa,LOC103046663,LOC108436939,LOC107696286,LOC107716663,LOC107576348,LOC107678975 coding downstream 113125 19624687 ~ 19632439 (-)
LOC103045635 arid3b,LOC108436938,LOC108275332,LOC107575848,LOC107752332 coding downstream 123016 19596930 ~ 19622548 (-)
LOC103030439 ube2q2,LOC108436947,LOC107696278,LOC105015542,LOC107661444 coding upstream 16350 19762795 ~ 19772325 (-)
LOC103024527 fam19a5b,LOC103024527,LOC108428378,LOC107696241,LOC107753604,LOC107598818,LOC108274593 coding upstream 193190 19939635 ~ 19972658 (-)
ticrr NA coding upstream 291010 20037455 ~ 20051285 (-)
c8h11orf96 si:ch1073-281m9.1,cunh11orf96,LOC103025886,LOC107696240,LOC107661503,LOC107575890,LOC107580776 coding upstream 313941 20060386 ~ 20062075 (-)
alkbh3 alkbh3 coding upstream 327061 20073506 ~ 20081335 (-)
G75069 NA non-coding downstream 57446 19640821 ~ 19688118 (-)
G74928 NA non-coding downstream 326760 19325392 ~ 19418804 (-)
G74911 aass,LOC102787118 non-coding downstream 390513 19354093 ~ 19355051 (-)
G74909 aass,LOC107753626,LOC107678990,LOC107752301,LOC107698474 non-coding downstream 395553 19344945 ~ 19350011 (-)
G74910 NA non-coding downstream 403628 19279652 ~ 19341936 (-)
G75092 NA non-coding upstream 52940 19799385 ~ 19799625 (-)
G75093 NA non-coding upstream 58321 19804766 ~ 19804970 (-)
G75106 NA non-coding upstream 124697 19871142 ~ 19872681 (-)
G75208 api5,LOC107753602,LOC107661449 non-coding upstream 286165 20032610 ~ 20034759 (-)
LOC107197502 NA non-coding upstream 355267 20101712 ~ 20129570 (-)
G74838 wasl,LOC105896696,LOC108275301 other downstream 672676 19070938 ~ 19072888 (-)
LOC103034453 LOC108436916,LOC107753633,LOC107659484,LOC107573489,LOC107752304,LOC108181664,LOC107598834 other downstream 737198 18992668 ~ 19008366 (-)
G74791 NA other downstream 805100 18939174 ~ 18940464 (-)
G74591 isl2,LOC105022634 other downstream 1715817 17982747 ~ 18029747 (-)
nrg4 NA other downstream 1860169 17877026 ~ 17885395 (-)
G75100 LOC108436948,LOC108275266 other upstream 113249 19859694 ~ 19865982 (-)
G75207 api5,LOC107696269,LOC107753602 other upstream 280717 20027162 ~ 20032027 (-)
hsd17b12 hsd17b12,hsd17b12a,LOC107661451,LOC107696265,LOC107573907,LOC107716735,LOC107753600 other upstream 337983 20084428 ~ 20100250 (-)
LOC103032014 maf,LOC108428434,LOC108274756,LOC102790406,LOC102298902,LOC101477682,LOC102192535,LOC101173775,LOC100702616,LOC107663990,LOC107565340 other upstream 876196 20622641 ~ 20748208 (-)
gatd1 pddc1,LOC102788149 other upstream 1318874 21065319 ~ 21071246 (-)

Expression


Co-expression Network