G75100 (LOC108436948,LOC108275266)


Basic Information

Item Value
gene id G75100
gene name LOC108436948,LOC108275266
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 19859694 ~ 19865982 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU101215
TGGCACAGACACAGCTGGAACCACTGGAACTGGCTCTGCctctacttttttatttttctttttctggcaTCCCTTCACCCTTGCCCTTCCACCTTTTGGTTTGCCTTTTTGACCATTTTGACCACAAATACCATTTTTAGGCTGTGCCTCTTCATAGATGGGAATGGGCCTCCTGACACAACCGTTGGGTGTATGCGAACAACAATAGGCTGTCTTTTTCACTGTAAATGTTGTGGATCCTGTATCAGTTACCTCTTTGATAGGCTCCATCTTCATGTACAGACCCGCTTTCTGAGCACAGCTTACATGAAAGGCAGTgtaacaattggccttgctgcACTGAATGCAGGCACCAACTCCTCTCTCTTTACAAAGGTAGCAGGTCAATTTCCAACGTGCTGGCGGAATGTTAGCAACACCATCAATGGGCTCAATAAAGAGTGTATTAGTAAAGCCAACCTCAGGGACCCATATGGCACAGACTACATGGCCCCAACGATCGTCATCTGTCCTCTTAAGAGCGCCACCTTTATTAGGGCAAAAAATACACTCGGCCGGCTGGGAAGGAGACTGTAAACAATGACGACACAACCACTGGCCCTCTGGAATGTGAGGGACCCCATAACACTCCTGATGCACAGCTAAGTTGCACATGTCGCAAAAAAGAATAGCGTTACTGTTCTGACACTCGCCATCCATGCAGATGCAGCACACAGCATCCTCATCAATGAGGGACTGCGGATCTACCTGACCCTGGCTTTCAAAAAAGGACTCTTTCTCAAAGCGGTCCATGAGAAACTCAAAAACATTCTGGGACACCTGGCTGTAaccctcactcttcctcttctcATTGATCAGCTCCAGCCATGCATAATCTTCCTCGTCCATATCATACTCCACCTCCTCATCAAGCTCCTCCGACGTCTTCTCCACATATTTGAAATAAGCAGAGGGTCTCCGTGGCACAGCTGGAAGATTATACTCAACCGTTTTGATTTTTGGCTCTGGTAACCTGCCCTGAGCTGGAGAACTCTGTCCTGCAGTTGGAGCTGCACCCTTCTTCTGCTGATAGTTTTTGAGCCGTACAGAGCGCACCAAAGCCTGCTGAGGTTTCTCAGTGTTCTCCTTGTTGCTGTCGCATTCACTGATCTCCTGAGCTAAGGGATCATCACTGTCGATGACATCGAGCTTGTCAAAAATACTGAGTCTGTGAACTTGACCATCGATCTCCAACTCAACCATGCGCTGGGCCTCGGCATAGGTGAGGGTCTCGCGGTTTCGTGAGGGTTTGATGGGTGATGGAGGCCTTGGTGTGGTGGGTGGACGATTAGTCCGactttttttcctcattttaacACCTGAAAGAAACTAACAGAGAAACCTTCATGTATAAACTAAGCAAGACATGACTTTGGTGACCAGAACATTTCTTTCAACATTTCAATCAGCATTCAAAACACCTAGTCAAACTTCtagataaaaatgtaaagtgtaaaactggCAGTTAGTCTAGTCACTCCCTGACAGAAAATCATCTCAGATATAAAAACAAGGGCTGTAACAGATACTTGGCTATAACAGCCTCAAGCCAAGACAGAAACTATCAACTAGCTTCAAAGTTTGTCAACAAATGCCCCTCTTAACAGTTTAAACCGAATCATGTGTCCTGTTACACCTTTACGAGTACAGCACCTCTGGATTAGccaacctagctagctaaactacCTGAGCAGAATAAAACCACGTGGACATTATGCCGTTATAATTTGCATGGTACTGTTTGGGTGCTAAGGAGACAAACAGTCTAGCTAACTGAAAGCGCGGCTTCAGCGTTGCCACGGTCGAGCAGTGTTTTAGCAAACTAGCcaggATAGTTACGCTAGCTAACTGCCATGCTAAGGCGCTAGCCAGCTAAGCTTACATTACAAATATGATAATAAACTAACCTAGTTAACTCACGAGACCACAGTCCCTGCCCTGACCTGCAAGAATACAATAATTTCCCGCCCCAAACACCTAAAAAGAAGCTTTTAAAAGAGGTTAAtcattagctaagctagctagtttatGAAGTGTCCGGGGTTAAACTCTGCAGGGCAGTGGGGTCTCCAGGACTGCTGGTTTGAGAACGCCTGAATGAAACCAGCTTAGCTTGCaagctaactagcttgctaaAACAGGGCCACACTGACTGACCGGCCGAGCGGGAGCTTTAACACAACCTGAGAGAaacttttaacagttttatGCACATTTTGAACTGCATGCAATTGAAGAACACCAGTATATAAACGTACTAGAACcgtagttagcttgttagctagctaacatcacaCAGGCGAAGTAGTTTAACGCTAGCTAGGTTAGTGTGTTATCTGGCTAGCTGTACCACAACACAAACTGGCCAAGGGCGAGCACAAAATCGGCGCTTCGCTTCTCGCTAGCGTTAGCTGGCTAATCCGTGCTACTGGAACTCGAAATTAGGCAAAGATGGCGTCAGACAAAACAAACAAGGTCTAAACGGGAACATTAGCGAGGAGTAACACTCTCACTTCCACAGGCAGCGCGCTCTCAGCTGAGTGTCGAAGTATAACAAGATATTTTCTCACTTAAAGGAATGAAACAAGACCAGACTTTCTTACCTTCTGTTTCGAAGTATCGTAAAACAAGCCAACGAGCCCTCACAGCGGCACCAGGGCACGCTAGCTAAACTACGCTAGCTAATAGCTAAAAGCAGCAGCGGTGTGTATAGGCAGGGCCTGAGGAGCAGCGAGGGTTAGCGTTAGCGTTATAAcgttaacacacacatacacactctgctACAGCAGCGCGCTAGCTAGCATCCAACGGATTCCGCCCGAGCTTTTAACCGATTTTTCAGAAGAATACAGTCCAGTATCCTCAACAACAGTCCTGATTCAGATAGGACCCCTCTAAACCGCGTTAAAATAACCATTCGCCCGTTTCTACGGCCCGTAGGTTTGCGGTTTAAAGCGCGGTATGTGGGTGCTAGCAAGCAGGCTAGTTCGCCGTTCCTGCCCCCAACAACAATGCGGCTGTACGGATCC

Function

NR:

description
PREDICTED: bromodomain-containing protein 1-like isoform X7

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU101215 True 3068 TUCP 0.47 2 19859694 19865982

Neighbor

gene id symbol gene type direction distance location
LOC103030439 ube2q2,LOC108436947,LOC107696278,LOC105015542,LOC107661444 coding downstream 87369 19762795 ~ 19772325 (-)
LOC103021510 LOC108436943 coding downstream 110193 19730163 ~ 19749501 (-)
LOC103030119 hcn4,LOC108436942,LOC107696280,LOC107573709,LOC106530001 coding downstream 134145 19692184 ~ 19725549 (-)
LOC103047267 parp6,parp6b,LOC108436940,LOC108275327,LOC107753615,LOC107661437 coding downstream 199432 19643325 ~ 19660262 (-)
LOC103046970 NA coding downstream 222042 19635125 ~ 19637652 (-)
LOC103024527 fam19a5b,LOC103024527,LOC108428378,LOC107696241,LOC107753604,LOC107598818,LOC108274593 coding upstream 73653 19939635 ~ 19972658 (-)
ticrr NA coding upstream 171473 20037455 ~ 20051285 (-)
c8h11orf96 si:ch1073-281m9.1,cunh11orf96,LOC103025886,LOC107696240,LOC107661503,LOC107575890,LOC107580776 coding upstream 194404 20060386 ~ 20062075 (-)
alkbh3 alkbh3 coding upstream 207524 20073506 ~ 20081335 (-)
LOC103045029 LOC108428372 coding upstream 326543 20192525 ~ 20206698 (-)
G75093 NA non-coding downstream 54724 19804766 ~ 19804970 (-)
G75092 NA non-coding downstream 60069 19799385 ~ 19799625 (-)
G75081 NA non-coding downstream 113249 19745564 ~ 19746445 (-)
G75069 NA non-coding downstream 171576 19640821 ~ 19688118 (-)
G74928 NA non-coding downstream 440890 19325392 ~ 19418804 (-)
G75106 NA non-coding upstream 5160 19871142 ~ 19872681 (-)
G75208 api5,LOC107753602,LOC107661449 non-coding upstream 166628 20032610 ~ 20034759 (-)
LOC107197502 NA non-coding upstream 235730 20101712 ~ 20129570 (-)
G75223 NA non-coding upstream 282707 20148689 ~ 20151436 (-)
G75224 rfwd3,LOC106584535 non-coding upstream 287565 20153547 ~ 20158204 (-)
G74838 wasl,LOC105896696,LOC108275301 other downstream 786806 19070938 ~ 19072888 (-)
LOC103034453 LOC108436916,LOC107753633,LOC107659484,LOC107573489,LOC107752304,LOC108181664,LOC107598834 other downstream 851328 18992668 ~ 19008366 (-)
G74791 NA other downstream 919230 18939174 ~ 18940464 (-)
G74591 isl2,LOC105022634 other downstream 1829947 17982747 ~ 18029747 (-)
nrg4 NA other downstream 1974299 17877026 ~ 17885395 (-)
G75207 api5,LOC107696269,LOC107753602 other upstream 161180 20027162 ~ 20032027 (-)
hsd17b12 hsd17b12,hsd17b12a,LOC107661451,LOC107696265,LOC107573907,LOC107716735,LOC107753600 other upstream 218446 20084428 ~ 20100250 (-)
LOC103032014 maf,LOC108428434,LOC108274756,LOC102790406,LOC102298902,LOC101477682,LOC102192535,LOC101173775,LOC100702616,LOC107663990,LOC107565340 other upstream 756659 20622641 ~ 20748208 (-)
gatd1 pddc1,LOC102788149 other upstream 1199337 21065319 ~ 21071246 (-)
LOC111193105 LOC102794092,LOC108274651,LOC107571202,LOC108428364 other upstream 1403522 21269504 ~ 21273017 (-)

Expression


Co-expression Network