G75131


Basic Information

Item Value
gene id G75131
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 20060370 ~ 20122740 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU101257
CTCCACAAATGtgcactatatttatatatgtatatatttattaaagtaagtaagaaattactttttacaaagataataaatgtaaaacaaaaatataaaggcATCATATATTCATAGTTCCATAATTTGTTTTTCTGCAATAGTGACCTTGCAAGCCCACAGTGTCAacaaaacatttctaacatttctAATCTCTTAGTTATATCAACAAGataatctgtaaataaatatctGTAACTTTTGCAAGAAAATACTTTGATCATCTCTGAGTTCATTAGTAAGTACACTAAGTTGGCAGACTCAAGTAACATCATCATTGTGAAACATTGTCTcctatgcagtgtgtgtgtgtgtgtgagtgtgtgtttgtgtgtacacaAACAATGTCTAAATTAAAGTGTGCCCAATAGGTTGTTGCAAAAGGGGTGGGGTCATTTCGCCggtttggtgtttggtggtggTTTTGTAAAG

Function

GO:

id name namespace
GO:0031667 response to nutrient levels biological_process
GO:0009991 response to extracellular stimulus biological_process
GO:0004982 N-formyl peptide receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU101257 True 471 lncRNA 0.32 2 20060370 20122740

Neighbor

gene id symbol gene type direction distance location
api5 api5,LOC107696269,LOC107753602,LOC107661449 coding upstream 25573 20027177 ~ 20034797 (+)
prr5l prr5l,LOC107573861 coding upstream 36143 20014235 ~ 20024227 (+)
LOC103023471 LOC108436948,LOC108275266 coding upstream 187658 19859433 ~ 19872712 (+)
LOC103024220 pim3,LOC108436897,LOC108275436,LOC107598820,LOC107573827,LOC107716739,LOC107696273 coding upstream 201535 19854598 ~ 19858835 (+)
LOC111193059 NA coding upstream 216148 19843302 ~ 19844222 (+)
rfwd3 rfwd3,LOC107754982,LOC107559137 coding downstream 25922 20148662 ~ 20160102 (+)
LOC103028218 LOC108428438,LOC108274991,LOC107559147 coding downstream 38161 20160901 ~ 20191617 (+)
tdrd12 NA coding downstream 86541 20209281 ~ 20230000 (+)
LOC103030550 LOC108428435,LOC108274760 coding downstream 131106 20253846 ~ 20276555 (+)
LOC103030013 LOC108428369,LOC107701578,LOC107742623,LOC107559153,LOC107723981,LOC107570647,LOC107688789 coding downstream 155837 20278577 ~ 20284673 (+)
G75034 NA non-coding upstream 255394 19804766 ~ 19804976 (+)
G75033 NA non-coding upstream 260721 19799385 ~ 19799649 (+)
G75026 NA non-coding upstream 294605 19761774 ~ 19765765 (+)
G75017 NA non-coding upstream 327332 19732016 ~ 19733038 (+)
G74995 NA non-coding upstream 410986 19624659 ~ 19649384 (+)
LOC111193104 NA non-coding downstream 161937 20284677 ~ 20288047 (+)
G75184 NA non-coding downstream 329447 20452187 ~ 20452452 (+)
G75192 NA non-coding downstream 453538 20576278 ~ 20577245 (+)
G75300 NA non-coding downstream 717793 20840533 ~ 20840981 (+)
G75309 LOC108428429,LOC108275416,LOC107566260,LOC107682256 non-coding downstream 746970 20869710 ~ 20873881 (+)
LOC103044129 NA other upstream 522753 19527212 ~ 19537617 (+)
tmem17 tmem17,znf774,LOC107678976,LOC107753710 other upstream 598183 19459958 ~ 19462187 (+)
cadps2 NA other upstream 737595 19140149 ~ 19322775 (+)
G74832 NA other upstream 974814 19082816 ~ 19085556 (+)
LOC103029914 scamp5,scamp5a,LOC108436905,LOC103363822,LOC107395508,LOC107703195 other upstream 1581025 18470704 ~ 18479345 (+)
LOC103028745 NA other downstream 80879 20203619 ~ 20207955 (+)
G75383 morc2,LOC107754332,LOC107701074,LOC107674835 other downstream 900516 21023256 ~ 21025128 (+)
G75391 pus7 other downstream 965882 21088622 ~ 21096906 (+)
mov10l1 NA other downstream 1127727 21250467 ~ 21264776 (+)
LOC103028957 rfx7,LOC108428391,LOC108275305,LOC107695007,LOC107563886,LOC100538179,LOC107741823,LOC100694937 other downstream 2632233 22754973 ~ 22780959 (+)

Expression


Co-expression Network