G75192



Basic Information


Item Value
gene id G75192
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 20576278 ~ 20577245 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence


>TU101332
ACTAATGATCAACAAAAAatcaactgaatgtctattaaatgcaagtTAACTCTTAGTTTAATGTTATTGATTCTGTATAGAACTTATACAGACCTAATACTAAGACTAACCTCAACAATGActtaaccctacaacctaaccctaatactaatcctaacctcaaccatgacttaaccctacaacctaaccctaatactAAACCCAACGTCAACCACGACTTATCCCTACAATCTAACC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU101332 True 237 lncRNA 0.34 2 20576278 20577245

Neighbor


gene id symbol gene type direction distance location
LOC103030013 LOC108428369,LOC107701578,LOC107742623,LOC107559153,LOC107723981,LOC107570647,LOC107688789 coding upstream 291605 20278577 ~ 20284673 (+)
LOC103030550 LOC108428435,LOC108274760 coding upstream 299723 20253846 ~ 20276555 (+)
tdrd12 NA coding upstream 346278 20209281 ~ 20230000 (+)
LOC103028218 LOC108428438,LOC108274991,LOC107559147 coding upstream 384661 20160901 ~ 20191617 (+)
rfwd3 rfwd3,LOC107754982,LOC107559137 coding upstream 416176 20148662 ~ 20160102 (+)
faap24 faap24 coding downstream 300172 20877417 ~ 20880566 (+)
LOC103033048 slc7a10b,slc7a10,LOC108428368,LOC108274532,LOC107679961,LOC107752484,LOC105900738,LOC107555706 coding downstream 304585 20881830 ~ 20895098 (+)
ccdc34 NA coding downstream 335536 20912781 ~ 20915900 (+)
LOC103034349 LOC108428426,LOC108274949 coding downstream 340261 20917506 ~ 20923676 (+)
ccdc77 ccdc77,LOC107754361 coding downstream 351045 20928290 ~ 20936087 (+)
G75184 NA non-coding upstream 123826 20452187 ~ 20452452 (+)
LOC111193104 NA non-coding upstream 288231 20284677 ~ 20288047 (+)
G75131 NA non-coding upstream 453538 20060370 ~ 20122740 (+)
G75034 NA non-coding upstream 771302 19804766 ~ 19804976 (+)
G75033 NA non-coding upstream 776629 19799385 ~ 19799649 (+)
G75300 NA non-coding downstream 263288 20840533 ~ 20840981 (+)
G75309 LOC108428429,LOC108275416,LOC107566260,LOC107682256 non-coding downstream 292465 20869710 ~ 20873881 (+)
G75313 NA non-coding downstream 309910 20887155 ~ 20910244 (+)
G75310 NA non-coding downstream 362106 20939351 ~ 20941050 (+)
G75323 ankrd26,LOC108428422,LOC105913370 non-coding downstream 368368 20945613 ~ 20947024 (+)
LOC103028745 NA other upstream 368323 20203619 ~ 20207955 (+)
LOC103044129 NA other upstream 1038661 19527212 ~ 19537617 (+)
tmem17 tmem17,znf774,LOC107678976,LOC107753710 other upstream 1114091 19459958 ~ 19462187 (+)
cadps2 NA other upstream 1253503 19140149 ~ 19322775 (+)
G74832 NA other upstream 1490722 19082816 ~ 19085556 (+)
G75383 morc2,LOC107754332,LOC107701074,LOC107674835 other downstream 446011 21023256 ~ 21025128 (+)
G75391 pus7 other downstream 511377 21088622 ~ 21096906 (+)
mov10l1 NA other downstream 673222 21250467 ~ 21264776 (+)
LOC103028957 rfx7,LOC108428391,LOC108275305,LOC107695007,LOC107563886,LOC100538179,LOC107741823,LOC100694937 other downstream 2177728 22754973 ~ 22780959 (+)
LOC103047784 LOC108428360,LOC108274708 other downstream 2204490 22781735 ~ 22815522 (+)

Expression



Co-expression Network