G75300


Basic Information

Item Value
gene id G75300
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 20840533 ~ 20840981 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU101490
TTTATTATAGgttatttttacacaaataagGCACAGTCACTGCATCTTacagaaaataaagtttaaactgacacatataaaaataattatgattttctttcaaGACTGTTTATCAAttctataacaaaaaaaatgttgcatcaCTGTCTGTGACAAATGAATTATTGACAAGTTATGggatctttttttaaacagggaCCTGTTTTCCACACAAGTCAATTGAAACCACTATGTCACACTATGGGTCAACTATCTAATAATCCCATTTTAAGACTAgctgaatatattatttttgtagaaGAAGTAAAGTGCATCCGAAATACAACAGTGGTCAAGaatgctgtatatatgtatacatgaaCACATTTAAAGCTGGAACAGGTGATTCTGTAGGAAAAAGTAAATGGTTGCTCTTGCTTTATACATCCTCTGTGTGACTGTGTAGCTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU101490 True 449 lncRNA 0.31 1 20840533 20840981

Neighbor

gene id symbol gene type direction distance location
wwox wwox,LOC107559152 coding upstream 207990 20289830 ~ 20632543 (+)
LOC103030013 LOC108428369,LOC107701578,LOC107742623,LOC107559153,LOC107723981,LOC107570647,LOC107688789 coding upstream 555860 20278577 ~ 20284673 (+)
LOC103030550 LOC108428435,LOC108274760 coding upstream 563978 20253846 ~ 20276555 (+)
tdrd12 NA coding upstream 610533 20209281 ~ 20230000 (+)
LOC103028218 LOC108428438,LOC108274991,LOC107559147 coding upstream 648916 20160901 ~ 20191617 (+)
faap24 faap24 coding downstream 36436 20877417 ~ 20880566 (+)
LOC103033048 slc7a10b,slc7a10,LOC108428368,LOC108274532,LOC107679961,LOC107752484,LOC105900738,LOC107555706 coding downstream 40849 20881830 ~ 20895098 (+)
ccdc34 NA coding downstream 71800 20912781 ~ 20915900 (+)
LOC103034349 LOC108428426,LOC108274949 coding downstream 76525 20917506 ~ 20923676 (+)
ccdc77 ccdc77,LOC107754361 coding downstream 87309 20928290 ~ 20936087 (+)
G75192 NA non-coding upstream 263288 20576278 ~ 20577245 (+)
G75184 NA non-coding upstream 388081 20452187 ~ 20452452 (+)
LOC111193104 NA non-coding upstream 552486 20284677 ~ 20288047 (+)
G75131 NA non-coding upstream 717793 20060370 ~ 20122740 (+)
G75034 NA non-coding upstream 1035557 19804766 ~ 19804976 (+)
G75309 LOC108428429,LOC108275416,LOC107566260,LOC107682256 non-coding downstream 28729 20869710 ~ 20873881 (+)
G75313 NA non-coding downstream 46174 20887155 ~ 20910244 (+)
G75310 NA non-coding downstream 98370 20939351 ~ 20941050 (+)
G75323 ankrd26,LOC108428422,LOC105913370 non-coding downstream 104632 20945613 ~ 20947024 (+)
G75342 NA non-coding downstream 134986 20975967 ~ 20976313 (+)
LOC103028745 NA other upstream 632578 20203619 ~ 20207955 (+)
LOC103044129 NA other upstream 1302916 19527212 ~ 19537617 (+)
tmem17 tmem17,znf774,LOC107678976,LOC107753710 other upstream 1378346 19459958 ~ 19462187 (+)
cadps2 NA other upstream 1517758 19140149 ~ 19322775 (+)
G74832 NA other upstream 1754977 19082816 ~ 19085556 (+)
G75383 morc2,LOC107754332,LOC107701074,LOC107674835 other downstream 182275 21023256 ~ 21025128 (+)
G75391 pus7 other downstream 247641 21088622 ~ 21096906 (+)
mov10l1 NA other downstream 409486 21250467 ~ 21264776 (+)
LOC103028957 rfx7,LOC108428391,LOC108275305,LOC107695007,LOC107563886,LOC100538179,LOC107741823,LOC100694937 other downstream 1913992 22754973 ~ 22780959 (+)
LOC103047784 LOC108428360,LOC108274708 other downstream 1940754 22781735 ~ 22815522 (+)

Expression


Co-expression Network