G75310


Basic Information

Item Value
gene id G75310
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 20939351 ~ 20941050 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU101507
TCTGAGGTACAAAGTGCATTGTCAGTCTatcttatattaaaaaaataataacaataaaaacattggaGTGGTAGTGTTTAGGCTTTGGCCTTTTTCTGTGATTGTGCGCTCGTCAGATGATGCACAGTTCTACCTGAACGCTTTTActtcctctttcttcttctgatTCTTCTATCTGGCCTGTGACTTACTATTCTTTTTGTTGCCTCAATTTATTCCACATTCCACAatcttttatcttatttatccAGTACATTTCTGCACCAGCACAGCCTTTTCCTGTACTGAGTGATCAAgagcagcactgtgtttaaaacgCACTTCATAATCCAAAATCTGATCACTGTAAACTCTATAGAGTCTGCCAATATTTTAGTCAATGTGTTCACATGAACTTGGGTAAGTTTACTCAGACAATAGTCAGATTTTTGTCTTTGGAACCAGCCATTAATCTCACTAAATAAGTCTTGTAAATCAAAAACTTCATGCCtgcgtttttatttttcatcaaacCACAATATGAGGGTTATTTAAATCTTTCATTTTCAgctatgctatttttttttaaaatgtggtgTCCATCTTGTGAGTGCTGAGTTCTACGCTGCTTGCTTATTTCCAGTACcattgtctgttttttaatcatgccATACTAAGAATACtaagatttttgttttaaataatcagAAAACTGCGGTAATCAGattttgaatgatttttttgtaCAAGTTAGAATCTACAGGTAGAATTGTGCATCATAGCTTTAACTTCTTTCATTTCTTAGCACTGTAAAAATAACTTAAGTAACTCTCACAACAGCTTCTTTAAAACCTAGGACCAATAAAGATTACTAAACATCCTGATACCCAATAATATTAGACCAtatcattttacatttatatttcaaTCCTATAATCCCGTAGTTTTCATTTATGAAAAATATCTCTGCATGAATAACTTTCCtgaacttaaataaacagaagaaacTCACAGTGTTAACAAATATAAATAGTGTAGCACTGAGAACTGAGTTACCTATAAAAATTTGcgcgtttgttttttttatatatttcttcttctttttcataGTTTCTCTTCATAAAAGAGTTATGTTTATGTTATCCAGGTGCTaaatgaatttcctAGCTGTCTTACATCTTCAGGACCTCATCAGTTCATATTTCAGCGAAGCAATGTCCAAAGCATAATCGCTAATTATTGGTGCATTATTGGCAATCAATACCGACTAAAATGTGTCAGTATTGACTTTGTCTACTTTCGGCCAACCAATACATCGATCAGGTcctatttaaaatgataaactggtaaacttcactctctctatatacAAATATACCAAACTATTACCGTTATTTCCTCTGTAAATCAGAAGTGTACAAATCAACAATGTTAAATTCTTCTCATATTCTCTGTATTTTAGGAAGGTTTAAGGTCATAATAATTGTGCAAAGCTCCTAAGCACATTGGCCCTTTTTAATGTGAGGTCTACACTCTGGTCAGATCATGTAGTTCTTCTTGAGAACCTCCAGATACTGCTGGGTGGCTCTGCTCAACGGATCCTGCTGCTCCAGATTAATGTTAAAATTCAGATTCTTCTGAGACTCAGAGGCAGAACCCACTGGAGACATTCGGGCCGATCCACCATCCAGCTCAGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU101507 True 1677 lncRNA 0.34 2 20939351 20941050

Neighbor

gene id symbol gene type direction distance location
ccdc77 ccdc77,LOC107754361 coding upstream 3264 20928290 ~ 20936087 (+)
LOC103034349 LOC108428426,LOC108274949 coding upstream 15675 20917506 ~ 20923676 (+)
ccdc34 NA coding upstream 23451 20912781 ~ 20915900 (+)
LOC103033048 slc7a10b,slc7a10,LOC108428368,LOC108274532,LOC107679961,LOC107752484,LOC105900738,LOC107555706 coding upstream 44253 20881830 ~ 20895098 (+)
faap24 faap24 coding upstream 58785 20877417 ~ 20880566 (+)
LOC103037268 incenp,sb:cb986 coding downstream 33740 20974790 ~ 20990577 (+)
LOC103038014 NA coding downstream 50708 20991758 ~ 20998066 (+)
LOC103046250 LOC103046250,LOC108428357 coding downstream 76404 21017454 ~ 21021871 (+)
thoc5 thoc5 coding downstream 106846 21047896 ~ 21057840 (+)
chid1 chid1,LOC107655144,LOC107674841 coding downstream 118382 21059432 ~ 21064841 (+)
G75313 NA non-coding upstream 29107 20887155 ~ 20910244 (+)
G75309 LOC108428429,LOC108275416,LOC107566260,LOC107682256 non-coding upstream 65470 20869710 ~ 20873881 (+)
G75300 NA non-coding upstream 98370 20840533 ~ 20840981 (+)
G75192 NA non-coding upstream 362106 20576278 ~ 20577245 (+)
G75184 NA non-coding upstream 486899 20452187 ~ 20452452 (+)
G75323 ankrd26,LOC108428422,LOC105913370 non-coding downstream 4563 20945613 ~ 20947024 (+)
G75342 NA non-coding downstream 34917 20975967 ~ 20976313 (+)
G75381 NA non-coding downstream 105765 21046815 ~ 21047280 (+)
G75403 NA non-coding downstream 206758 21147808 ~ 21148349 (+)
G75390 rps17,rs17,LOC106527967,LOC107389132,LOC103042467 non-coding downstream 249716 21190766 ~ 21195771 (+)
LOC103028745 NA other upstream 731396 20203619 ~ 20207955 (+)
LOC103044129 NA other upstream 1401734 19527212 ~ 19537617 (+)
tmem17 tmem17,znf774,LOC107678976,LOC107753710 other upstream 1477164 19459958 ~ 19462187 (+)
cadps2 NA other upstream 1616576 19140149 ~ 19322775 (+)
G74832 NA other upstream 1853795 19082816 ~ 19085556 (+)
G75383 morc2,LOC107754332,LOC107701074,LOC107674835 other downstream 82206 21023256 ~ 21025128 (+)
G75391 pus7 other downstream 147572 21088622 ~ 21096906 (+)
mov10l1 NA other downstream 309417 21250467 ~ 21264776 (+)
LOC103028957 rfx7,LOC108428391,LOC108275305,LOC107695007,LOC107563886,LOC100538179,LOC107741823,LOC100694937 other downstream 1813923 22754973 ~ 22780959 (+)
LOC103047784 LOC108428360,LOC108274708 other downstream 1840685 22781735 ~ 22815522 (+)

Expression


Co-expression Network