G75366


Basic Information

Item Value
gene id G75366
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 20979402 ~ 20985652 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU101612
ttttaattcattatgataaaaaaaaacatggctataTTGTGTTTTGCATTCCTATAAATATTAATGGCATTGTAATCAAGTATGAATGCACTATAAGATGACTTGATTGTGTTCATTGAGTCTTACAGGACATGCCATCCATTGCGAGTGTTAccaaaaattattttaacacacagcCACTTGGAAAATGACATAAGAAGGTAGGAAAACATCAGGACATATTAAAACTCTCCCACTACTTGTTTGGACATAGTATGAGCCCTAACCCACACCTCTACAAGTTAGATGGCAAAAGGAAAGTGACCCAGTATACGCACAGACACTAGTGCACAAACACAAGCCAGTGAAGTAGTTACAGTGGATTAGACACAGAATGTTAACTTACCACTGAACCAGAACTCAACTTGACATCAGTTTTTCCGGTCTGCTTAATGAAAGATTTCATGATGGAGCTGCGGCCAAGTGAGCCTGGAGTCATCATGAGCAGCTGGTTCTTTTGTACTGTTTGCAAAAAGCGCATGCTGTGTGTAatgccAGTCATGGCCTTCTTGGGAGGGGACTGCTTCTTCTTTGGTGTGCTGAGTGCTACTGCTGCAGACTCTGCTGCACGACGTTTAGAGCCAGAGCGAGAAGACCTTGGTTCATCCTGAGACTTTTTCCCACCGTCATCTGTTTCAGACAGCCGAGCCATAGACCGTGTGAAACGGCAATGTTCACCAGCAGGAGGTGTTTCTTGCTGCATTTCCACCTCAACCAGTGGTATCGCTTTGTCTAGTGAGCTCTTGGCCTTGACATCCTGTGGCGGAGGTGTCTGTGCTTCAGTTATGTTTTCAGCCACAAGTTCTGCTGGCTTTTCCACAGTAACAATTTGCTCAATTTTGTTCTCTATGTCATTCTCCTCCATTTCAACATCCATAGAAACATCacCACTGACTGAACTGCTGCATGTGGAGTTGCCCTGCCTGGCTTTCTTCTTCAGGAAGGACCGCCGAGAGGCACGTCGGACTGCTTCCTGTGTCATGCTGTGTCTAAGTCCCACAAGAGAGCGCCGCAGCACCAAAGAGTGTCGGACCGAGGTCCTTGACGGGGCCTGAGCTCCTGATGTGGCAATGGGCATTTTACTTGCACAGCGGCCTGGAGAGGGCCCAGACCCGATCAGTTTTTCGGCAGAAAGACGCTCAGCCGAGGGGATTTTCACCACTGCTTGAGACACTAATGTCTGCACCGGGGACGAAGAGCTGCTTGACTCCTTCACTTCCGACACATTTTTAGGGGCTTCAGGCGTCTGTGGAGCTTCATTCACTGTCTCAACCCCCTCGATATCCTCCTCCTTTGCCTTGGCAGCTCCCTTATTGCGAGTGCTACGTTTGACAGGCTCGCTCTCAGTCACTGCTACAGCAGCTTTATTACGCCGGGTACGGCGAACAGGCTCCTCAGACACAGAGACCTCAGGACTGCTGATGGGAGGATTTGTTATTACCACATTCTCAGAAATCAAATTAAGAGTAGTCTGGATCGAGGAACGACGCaggttgctgcgctttcctttaGAGAATCGTCTTTTGTTACGCGTGTCATTAAGCTCTGTGGAGATCCGTTTTCTGCGATTTGTTCTTTTCTGTGATGGAGTCTTGGGCATGAGCTCTGGTTCTGTAATGAAATTACTGGAGAACATGCGCTGAGCTTCCTGCTGAATCTCCTCCAACCACAACATGTGAACATTCTCAACCTCATTAGTAAAATCCTGCAGCTTCCCAGTCAACACCTGCGTGAGGGAACGCATAGCCTCGGGCAAAGTACTCATGGCTGCGCCCCCCAAAAAACCTGtttttttacGAAATTCGAGAGACCGCTCTATTTCTCCTTCGTCTTTCCCGTAGTCCCCGTTCTGAGAAACATTCAGGACCACTACAAAACACTCTGCTTTTTACCATTCGAGCTGCCCGCTCAAACGgtttaagtaatttaaaattCTCCGTGCACCAATCATTGCTACGCGCTACacgatt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU101612 True 2009 lncRNA 0.47 11 20979402 20985652

Neighbor

gene id symbol gene type direction distance location
LOC103036040 ankrd26,LOC108428422 coding downstream 4653 20939918 ~ 20974749 (-)
LOC103034889 LOC108428424,LOC108274948 coding downstream 51128 20923738 ~ 20928274 (-)
LOC103033709 LOC103033709,LOC108428427,LOC105941050,LOC101483816 coding downstream 68544 20908879 ~ 20910858 (-)
LOC103033388 LOC103033709,LOC108428427,LOC105941050,LOC101483816,LOC102290823 coding downstream 73882 20903078 ~ 20905520 (-)
trnat-agu_2 NA coding downstream 83226 20896103 ~ 20896176 (-)
LOC103038341 LOC108428358 coding upstream 18401 21004053 ~ 21007646 (-)
morc2 morc2,LOC107674835 coding upstream 36314 21021966 ~ 21042030 (-)
LOC103039177 NA coding upstream 57829 21043481 ~ 21047306 (-)
LOC103041246 cd151,LOC103041246,LOC108410837,LOC107674842,LOC107655143,LOC107561168 coding upstream 86403 21072055 ~ 21084451 (-)
pus7 pus7 coding upstream 102967 21088619 ~ 21098682 (-)
G75357 LOC108428367 non-coding downstream 65316 20912831 ~ 20914086 (-)
G75295 NA non-coding downstream 184443 20794484 ~ 20794959 (-)
G75286 NA non-coding downstream 410045 20568847 ~ 20569357 (-)
G75270 NA non-coding downstream 676857 20301885 ~ 20302545 (-)
G75243 LOC108428369,LOC107701578,LOC107742623,LOC107559153,LOC107723981,LOC107570647,LOC107688789 non-coding downstream 694760 20278476 ~ 20284642 (-)
G75367 NA non-coding upstream 542 20986194 ~ 20986762 (-)
G75419 NA non-coding upstream 56455 21042107 ~ 21066403 (-)
G75426 chid1,LOC107674841,LOC107655144 non-coding upstream 75806 21061458 ~ 21063620 (-)
G75424 NA non-coding upstream 78696 21064348 ~ 21065147 (-)
G75444 LOC108428417 non-coding upstream 186970 21172622 ~ 21175068 (-)
LOC103032014 maf,LOC108428434,LOC108274756,LOC102790406,LOC102298902,LOC101477682,LOC102192535,LOC101173775,LOC100702616,LOC107663990,LOC107565340 other downstream 231194 20622641 ~ 20748208 (-)
hsd17b12 hsd17b12,hsd17b12a,LOC107661451,LOC107696265,LOC107573907,LOC107716735,LOC107753600 other downstream 879152 20084428 ~ 20100250 (-)
G75207 api5,LOC107696269,LOC107753602 other downstream 947375 20027162 ~ 20032027 (-)
G75100 LOC108436948,LOC108275266 other downstream 1113420 19859694 ~ 19865982 (-)
G74838 wasl,LOC105896696,LOC108275301 other downstream 1906514 19070938 ~ 19072888 (-)
gatd1 pddc1,LOC102788149 other upstream 79667 21065319 ~ 21071246 (-)
LOC111193105 LOC102794092,LOC108274651,LOC107571202,LOC108428364 other upstream 283852 21269504 ~ 21273017 (-)
LOC103024007 LOC108428399 other upstream 1457084 22442736 ~ 22574013 (-)
LOC103033738 LOC103033738,LOC108444230,LOC106560753,LOC105008418,LOC108274439,LOC107549618,LOC107686877 other upstream 2338925 23324577 ~ 23366216 (-)
LOC103042310 ucmab,ucma,LOC107720768,LOC107569716,LOC107673257,LOC108275358,LOC107559968 other upstream 2841562 23827214 ~ 23833068 (-)

Expression


Co-expression Network