G75381


Basic Information

Item Value
gene id G75381
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 21046815 ~ 21047280 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU101628
TCTGGGTTCTTAATGTCATGTTGTTTCGAGTATATCCCAATTCCAATAAAGGCTCCAGCCAGGATCAGCaggcagagaaaaaaaacaacaacaggcgGATGATGGACAAGTTTAAACCTCAGATTTGTTACAGGCTGCCACTGAGCCATGGTGTGTTACAAAAACCCTCAACACAAGCACCACcTTTCATTTGCTTAAGTTAGCTATCCCAGAGGAATACTGGGCAATGAACCTGAGCAGAGTGAACAATACGTTATATTGTTTTAGAGTCAACACTGCACAGATACTACCGATTAGACGTTAAAAGCAATGTTAACTCTTTAAGTACAACAATAGTAAGTACACACTTGACTTCCTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU101628 True 359 lncRNA 0.41 2 21046815 21047280

Neighbor

gene id symbol gene type direction distance location
LOC103046250 LOC103046250,LOC108428357 coding upstream 24944 21017454 ~ 21021871 (+)
LOC103038014 NA coding upstream 48749 20991758 ~ 20998066 (+)
LOC103037268 incenp,sb:cb986 coding upstream 56238 20974790 ~ 20990577 (+)
ccdc77 ccdc77,LOC107754361 coding upstream 110728 20928290 ~ 20936087 (+)
LOC103034349 LOC108428426,LOC108274949 coding upstream 123139 20917506 ~ 20923676 (+)
thoc5 thoc5 coding downstream 616 21047896 ~ 21057840 (+)
chid1 chid1,LOC107655144,LOC107674841 coding downstream 12152 21059432 ~ 21064841 (+)
srpk2 LOC108428417,LOC106560984,LOC108248824 coding downstream 53129 21100409 ~ 21187436 (+)
LOC103044722 LOC108428364 coding downstream 223458 21270738 ~ 21273031 (+)
LOC103046854 NA coding downstream 227662 21274942 ~ 21293323 (+)
G75342 NA non-coding upstream 70502 20975967 ~ 20976313 (+)
G75323 ankrd26,LOC108428422,LOC105913370 non-coding upstream 99791 20945613 ~ 20947024 (+)
G75310 NA non-coding upstream 105765 20939351 ~ 20941050 (+)
G75313 NA non-coding upstream 136571 20887155 ~ 20910244 (+)
G75309 LOC108428429,LOC108275416,LOC107566260,LOC107682256 non-coding upstream 172934 20869710 ~ 20873881 (+)
G75403 NA non-coding downstream 100528 21147808 ~ 21148349 (+)
G75390 rps17,rs17,LOC106527967,LOC107389132,LOC103042467 non-coding downstream 143486 21190766 ~ 21195771 (+)
G75405 NA non-coding downstream 152007 21199287 ~ 21204023 (+)
G75413 kiaa0101 non-coding downstream 189312 21236592 ~ 21238466 (+)
G75577 NA non-coding downstream 703646 21750926 ~ 21751248 (+)
G75383 morc2,LOC107754332,LOC107701074,LOC107674835 other upstream 21687 21023256 ~ 21025128 (+)
LOC103028745 NA other upstream 838860 20203619 ~ 20207955 (+)
LOC103044129 NA other upstream 1509198 19527212 ~ 19537617 (+)
tmem17 tmem17,znf774,LOC107678976,LOC107753710 other upstream 1584628 19459958 ~ 19462187 (+)
cadps2 NA other upstream 1724040 19140149 ~ 19322775 (+)
G75391 pus7 other downstream 41342 21088622 ~ 21096906 (+)
mov10l1 NA other downstream 203187 21250467 ~ 21264776 (+)
LOC103028957 rfx7,LOC108428391,LOC108275305,LOC107695007,LOC107563886,LOC100538179,LOC107741823,LOC100694937 other downstream 1707693 22754973 ~ 22780959 (+)
LOC103047784 LOC108428360,LOC108274708 other downstream 1734455 22781735 ~ 22815522 (+)
G75938 LOC105900730,LOC105912833 other downstream 2440250 23487530 ~ 23487870 (+)

Expression


Co-expression Network