G75419


Basic Information

Item Value
gene id G75419
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 21042107 ~ 21066403 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU101673
TCAAGATTTAAACACGTATGATTGTATGTTTATTGCTGTAACCTGCCGATTCTGACTCGCACATAACACACGAGTACACGAGCGACTGCAGGCAGCTAACCTAGGTTATCTCTCTCGAAATTAATCACTGCGTGCAGTTTATGTCCGTCAGGTAGCTTCTTCAAAATCAACCAAAAATCTCTGCAATAAATCATGTTAGCCATGTATCTTCGGTTCACTAGACAGAGAATACAATTCTTTTAAACTCAGCGGGTCGAGTCGATTCATGGTCTCCACCAAAGCTGTcgtgtttgttaaataaaataacattatattcAAAGTGCAGAAAGCTACAGCTAACCTAACGCTAGCTATATACCTCGCCTAACGAAATATCGTATTTACGAGATAAGAGCACATGAACGCCACAACAAACTCGTATTTATCAGTGGGAAGCCCCACGTTTCCTAGTTGGGGCGTGTCAGTAACAAGAggtcaataaattaatttacttttttttttaattgataaataaatttaataaattgagGCAGACAGTTTGTATTGTAAGCTGATTAACACTTCAACATGTGCAGGTTGTTATTAGCTAACTAAAAAATATCGTGAAttttgaaatgtgaaaaaaactgaaaagactAGTATGATTCACTGTtctaatgggataaaaaaaacaccactctCCAAACTCGTGACTTATTCACTTCGTTCTCTTGGAGTAGAGCAAAATATAACCTTCTGATTTTTATGACAATAGACAAAAATACGCATCTTTAGCCGTAAATACGACCTCCACCCTCATAAGTAGGAATCTCAAAGAAGGACTAGTAGCATTAGTAACTAGCCAAACGGGCTAACCTGAGAAAAACCcgagctaacgctaagctagctaggttatattTAGAAACCGCTAGGTTAGCTTAGATATTATAAAACTCGGCTGCGCTGTTGAGCGACTGGCTAAACGCTTCCTTTAACTCACCTgcacaataaacacttctaaCCAACAGAATCGCAAGTAAATTGAGGTTATTTTTCCAGCAGAACAACAAATCCGTCTCCACACCGCACACTCCAGCACCAGCCCGCCCGCTCGGTCCTACCGCAGCACAGACCCGCTCACGTAGTGCTCAGAGTGATTGGCAGCCGAATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU101673 True 1150 lncRNA 0.40 2 21042107 21066403

Neighbor

gene id symbol gene type direction distance location
morc2 morc2,LOC107674835 coding downstream 77 21021966 ~ 21042030 (-)
LOC103038341 LOC108428358 coding downstream 34461 21004053 ~ 21007646 (-)
LOC103036040 ankrd26,LOC108428422 coding downstream 67358 20939918 ~ 20974749 (-)
LOC103034889 LOC108428424,LOC108274948 coding downstream 113833 20923738 ~ 20928274 (-)
LOC103033709 LOC103033709,LOC108428427,LOC105941050,LOC101483816 coding downstream 131249 20908879 ~ 20910858 (-)
LOC103041246 cd151,LOC103041246,LOC108410837,LOC107674842,LOC107655143,LOC107561168 coding upstream 5652 21072055 ~ 21084451 (-)
pus7 pus7 coding upstream 22216 21088619 ~ 21098682 (-)
LOC103042467 rps17,rs17,LOC103042467,LOC107389132,LOC108428414 coding upstream 123642 21190045 ~ 21197519 (-)
LOC103043194 csnk1g1,LOC108415052,LOC108274686,LOC106573333,LOC107738908,LOC107559435 coding upstream 132847 21199250 ~ 21235118 (-)
pclaf kiaa0101 coding upstream 170229 21236632 ~ 21238194 (-)
G75367 NA non-coding downstream 55345 20986194 ~ 20986762 (-)
G75366 NA non-coding downstream 56455 20979402 ~ 20985652 (-)
G75357 LOC108428367 non-coding downstream 128021 20912831 ~ 20914086 (-)
G75295 NA non-coding downstream 247148 20794484 ~ 20794959 (-)
G75286 NA non-coding downstream 472750 20568847 ~ 20569357 (-)
G75444 LOC108428417 non-coding upstream 106219 21172622 ~ 21175068 (-)
G75447 NA non-coding upstream 118472 21184875 ~ 21187745 (-)
G75451 NA non-coding upstream 178861 21245264 ~ 21245530 (-)
G75542 twf1,LOC108428409 non-coding upstream 499919 21566322 ~ 21575655 (-)
G75550 NA non-coding upstream 516962 21583365 ~ 21584651 (-)
LOC103032014 maf,LOC108428434,LOC108274756,LOC102790406,LOC102298902,LOC101477682,LOC102192535,LOC101173775,LOC100702616,LOC107663990,LOC107565340 other downstream 293899 20622641 ~ 20748208 (-)
hsd17b12 hsd17b12,hsd17b12a,LOC107661451,LOC107696265,LOC107573907,LOC107716735,LOC107753600 other downstream 941857 20084428 ~ 20100250 (-)
G75207 api5,LOC107696269,LOC107753602 other downstream 1010080 20027162 ~ 20032027 (-)
G75100 LOC108436948,LOC108275266 other downstream 1176125 19859694 ~ 19865982 (-)
G74838 wasl,LOC105896696,LOC108275301 other downstream 1969219 19070938 ~ 19072888 (-)
LOC111193105 LOC102794092,LOC108274651,LOC107571202,LOC108428364 other upstream 203101 21269504 ~ 21273017 (-)
LOC103024007 LOC108428399 other upstream 1376333 22442736 ~ 22574013 (-)
LOC103033738 LOC103033738,LOC108444230,LOC106560753,LOC105008418,LOC108274439,LOC107549618,LOC107686877 other upstream 2258174 23324577 ~ 23366216 (-)
LOC103042310 ucmab,ucma,LOC107720768,LOC107569716,LOC107673257,LOC108275358,LOC107559968 other upstream 2760811 23827214 ~ 23833068 (-)
deaf1 deaf1,LOC107726848 other upstream 3174495 24240898 ~ 24260530 (-)

Expression


Co-expression Network