CI01000009_03244366_03259106 (ILDR2)


Basic Information

Item Value
gene id CI01000009_03244366_03259106
gene name ILDR2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 3243598 ~ 3259106 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_03244366_03259106.mRNA
TGTGCTCCACCCTTTGACGAGAATTTGGGTGTCTCTGTGTTTGTGGAAAAGACCTCCTCTCTACTTGGACCAAACTTGATCTTTTTGCAAAGTTGTAATGGTGTACAGGTGATTGTGAAAGATGAGAAGAAGTTTGCCATGCTGTTCTCGACAATTGTTCTTCCGTGTCATTACACCACCCACTCCACTCAAACCGCAGTGGTACAGTGGTGGTACAAGTCTTACTGTACAGACCGCACTCGGGATTCCTTCACCTTTCCTGAGTCCCTGGGGGTCCGCGGATCTGATCTGGGAGCTACGTCTCATCTGGACTGCTCTGACAAGAGCCGCACGGTCCGCATCGTGGCCTCAGGACAGGGATCTTCTATGACCTTAGCAGAACACTACAAAGGAAGAGATATCTCCATCATTAACAAAGCAGATCTGCGCATTGGACAGCTGCAGTGGGGCGACAGCGGTGTATATTTCTGTAAGGTGATCATTTCTGATGACCTGGAAGGGAAAAATGAAGGCCAGGTGGAGCTACTGGTGCAGGTGTGCCAGCCATTGACAAAGTATACTCAGTGTAAAATAGACTGTACATGTAAGGCCATTTCTCTCTCAGGGAAGACCTTTGTTGAAGGTAGGACAGGTGTGCTGGATGACATCCTGCCTGAGTTTGATTTGGAGATTATGCCAGAGTGGGTGTTTGTGGGAGTTGTCGTCCTTGGTAGCGTTCTCTTCCTGTTGTTGGTTGGGATCTGCTGGTGCCAGTGTTGCCCTCACTCCTGCTGTTGTTATGTACGCTGTTGCTGCTGTCCTGATACATGTTGCTGTCCAAAACACTTATACGAGGCAGGAAAGATGGCAAAGAGCGGCCAACCTCCTCAGATTGCCATGTACCAACCTTACTATGTTCCTGGTGTGCCTGTGGTTTCTGTGGTCCCTCCAGCCGCTCCATCCATCATTGAACCCAAGTTATCTACAGTACCTCGTTCAGCAGAAAACAATATAGCTGGAGTGCGCAGTGGCTATCGACTCCAGGCCAGTCAGGGTCAGGACGCTATGAAGGTTGTGTACTACGTAGAGAGGGACCTGGCGCAGTTCCACCCTACCAAGGGGGCCAGTCATCCATCTGGCAGCCTATCAGAACTGAGCTCTCTGCACGATGGTGACACAGACTTTAGACAGACCTATCGGCAGGTCCAGAGGAAAGCACTACCACCCATCAGTGACCACATTGATGAGGCGCGTCTCCGAACAACATCGATTGGCCATGGGCTCCGCCCCTCACATTATCAGAGCAATCACTCTCTGGACGAGCATGACAACAGGTGGAACTGTCGCTCTGAGCACCTGCCTCGCAAAGCTTTCACCAGGGGGCGCACGGGGTCACTAGATGAGCTGGAAGAGTTTGCTATTTCGTATGGCCCACACGGTCGACGAAGAGGTGACTTTCGTGGACCTCAGCAAGACTTTGAAATGGGACCAAGGTCGCGGGACTATCCACCGTCATACCGAGACGGGCCACGTTATTCTCGTGATGATGACGATAACAACTGGCGTCGTCGAGGCTCGCCACCTTCCCCACCAAAAAGGCGTGACGCAGGTGACAGTGAGCGTTATGTTGCACGCCAGAGGTCATATGACGATACCTACCTGAACACTTTACTGGAGCGCAAGGCTAGGGGCCATGGAGAGTGGGGTGGGAGGACTGATGATGACAGTGACACACCCTCAAAAGGCAGTTCCAAGAAGAGCAGTGACTGTTACAACAACAGGTCACCTAGCAACCGCCCCGAGGAGGATGATCCTTTACCTCCGTACTCTGAGAGGGAGGCGGAGAGGTTTAGAACTGAAGAGCTTATAGCGAGGGAACGGTACAGGACTGTTGATCGCCCTTTTTCATACACACGTCCGGCTCAAGGACTGTCCCATACGCTACAGGAGCGCAGGGAGGACAGGGACAAACCCAGGAAACTGACCACTCATCTAAGCAGAGACTCTCTAATTGTGTGACGTCCTCAGACTGAGCTGACATCATACTAATAACATCACCATCAAGCTGAAGAGAAATGCCCCAGACACTAAGCATCAATCAGTCAGCAAGACACATTTTAGGATCACACAGACATGAAGAGCTTGAGAACTTTTGCTGGTCAAGGGCAAGAACGTAGTGTGTGTGTGTCTGTTTTTAATGTCTATATTGCTTAATTATGACCTACTTTCTTCATCAGTCCTCAAGACTGCCACTGCACTAAAGTTGTGTTAAAAAGGACTTTAAAATGGTTCAGATGATATTTAAGTGCTCTAAACATTCCTTGGTATTTTGTATATCTTCAGTACTGTAATGGGACATTGTCTCTGATATTTCAATATGGCCTTTGTTTGCACTGTACTATACATTTGTATCAGTGTTAATCAGTTGGCTGACTCTCAAGGGAAGCATAAATGTTTGTGCTTTTTATAATGTGCCATTTATTTGTATTCCATGGTTTTAAAATAATGATTTTGATATGAGGGTCAAAGACAAATAAAACAAACAAAAGTGTAATACAGCTTTGAATTTTGTTTTTTTCCCCATACATTAGAATGTGTCTGGTTTAATTTTATATTTTTCTGAAAATGACTATCATTCTTCTTCTTTTTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTACCATGATTTACAGAAGACACCCACTAAAATGTCATTCAGTGTTAAAAATAGTTTAAATTCCAAAAAATATTTTTTATTTAAACAAGAATCATTTGATGACAAATTAAA

Function

symbol description
ildr2 Acts upstream of or within endoderm development and pancreas development. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in several structures, including blood vessel; intestine; nervous system; optic vesicle; and ventral mesoderm. Orthologous to human ILDR2 (immunoglobulin like domain containing receptor 2).

GO:

id name namespace
GO:0031016 pancreas development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_03244366_03259106.mRNA True 2766 mRNA 0.46 11 3243598 3259106

Neighbor

gene id symbol gene type direction distance location
CI01000009_03235111_03242103 NA coding downstream 1495 3235014 ~ 3242103 (-)
CI01000009_03226613_03234223 ME3.L, ME3 coding downstream 9375 3225768 ~ 3234223 (-)
CI01000009_03171440_03194494 DCAF6 coding downstream 48453 3171440 ~ 3195145 (-)
CI01000009_03140599_03143635 SLC35A5 coding downstream 99963 3140599 ~ 3143635 (-)
CI01000009_03009238_03025860 NA coding downstream 217661 3008360 ~ 3025937 (-)
CI01000009_03261739_03262843 NA coding upstream 1932 3261038 ~ 3262843 (-)
CI01000009_03264437_03267242 NA coding upstream 5331 3264437 ~ 3267242 (-)
CI01000009_03292206_03295043 NA coding upstream 33100 3292206 ~ 3295043 (-)
CI01000009_03306370_03311820 NA coding upstream 47183 3306289 ~ 3311820 (-)
CI01000009_03358707_03369503 PPP2R3B coding upstream 98902 3358008 ~ 3369577 (-)
G52592 NA non-coding downstream 19799 3223490 ~ 3223799 (-)
G52593 NA non-coding downstream 20637 3222632 ~ 3222961 (-)
G52521 NA non-coding downstream 21656 3220732 ~ 3221942 (-)
G52496 NA non-coding downstream 36172 3202765 ~ 3207426 (-)
G52494 NA non-coding downstream 87452 3150263 ~ 3156146 (-)
G52513 NA non-coding upstream 19638 3278744 ~ 3279333 (-)
G52501 NA non-coding upstream 28212 3287318 ~ 3290823 (-)
G52606 NA non-coding upstream 41843 3300949 ~ 3302661 (-)
G52623 NA non-coding upstream 122878 3381984 ~ 3386060 (-)
G52639 NA non-coding upstream 147557 3406663 ~ 3406876 (-)
CI01000009_02885473_02893975 NA other downstream 344191 2883688 ~ 2893975 (-)
G52410 NA other downstream 681065 2551724 ~ 2562533 (-)
G52098 NA other downstream 1835971 1401932 ~ 1407627 (-)
G52828 NA other upstream 958314 4217420 ~ 4231469 (-)
G53515 NA other upstream 2243289 5502395 ~ 5505248 (-)
G55814 NA other upstream 5166715 8425821 ~ 8428012 (-)
CI01000009_08858198_08860555 NA other upstream 5599046 8856310 ~ 8860563 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_037993 ildr2 coding NC_007120.7 CM002893.2 34274501 ~ 34300707 (-)