CI01000009_03261739_03262843


Basic Information

Item Value
gene id CI01000009_03261739_03262843
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 3261038 ~ 3262843 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_03261739_03262843.mRNA
CCTCTATGAATCTTGCCACAATAGGCATTGTTGCTGGTTGTATTGCTGGAGCTACAGTGCTCATAATAATCATCATCTGCTGTTGCCGCAAACGGAAACAGAAATCAAAAAAAGTTCCAGTGGTGGAATACCACGACGAACCACAAATAGAATATATTGACGTAGGGAATACATACAACACTGAAGAGAGAACTGACAAAGCTCGAAGTGATGACAGTGGAGGTGACCGTGATGACCTCAGAGATCGCTTCGATGACCGCAAAGGTAGCCGTGATGACCTCAGAGATCGCTACGATGACCGCAAAGGTAGCCGTGATGACCTCAGAGATCGCTACGATGACCGCAAAGGTAGCCGTGATGACCTCAGAGATCGCTACGATGACCGCAAAGGTAGCCGTGATGACCTCAGAGATCGCTACGATGACCGCAAAGGTAGCCGTGATGACCTCAGAGATCGCTACGATGACCGCAAAGGTAGCCGTGATGACCTCAGAGATCGCTACGATGACCGCAAAGGTAGCCGTGATGACCTCAGAGATCGCTACGATGACCGCAAAGGTAGCCGTGATGACCTCAGAGATCGCTACGATGACCGCAAAGGTAGCCGTGATGACCTCAGAGATCGCTACGATGACCGCAAAGGTAGCCGTGATGACCTCAGAGATCGCTACGATGACCGCAAAGGTAGCCGTGATGACCTCAGAGATCGCTACGATGACCGCAAAGGTAGCCGTGATGACCTCAGAGATCGCTACGATGACCGCAAAGGTAGCCGTGATGACCTCAGAGATCGCTACGATGACCGCAAAGGTAGCCGTGATGACCTCAGAGATCGCTACGATGATCGCAGAGGTAGCCGTGATGACCTCAGAGATCGCTACGATGATCGCAGAGGTAGCCGTGATGACCTCAGAGATAGGTATGATGATCGCAGAGATCGGTATGATGACCATAGAGATCGCTATAGATAAAATCATTATGCTCAGTATGATAATCACCATGATCAGTGATGAGCCATTTAATTATTATGACAACCATCCAAATTTTCCTACACGGACAATAGCAGTGAGCCAAGGCCTCAGATGGTATCCAGTGTGTATTTTTGTTCTACAGTTGTTCAAACATATAATATGTTTAACTAAATTTTTTTCCTGTGTTGATAATCAAATCAAATTGTGCTTTATCCCTACAGTGTCAAATGATTCTTCTGAGCTGAATGAATCATCCTTTTTTTATTTACTTTTTGTTTTATTTTACAGGATTGTAATAGTATTTTATAAACAGCATATAGTTTTTTGTTGTTGTAATGTCTATCAGCTAAAGTAATTAGGCTACATCACATTTTATTCTTCTGAATCATCTTTTTTTTTTGGGTGGATGTTCAGAATGGTGCTTAACGACGATGACATTTCTCCAATTATTTTGTACATTTCTATATTATTTTAAAAAGCTTTTAACCCTGCATGTTATGTATATGTTAGTTTTTTAAGACAATGAAATAGGCCCTACTTAATTATAATCATAAATTGCAATCTTTATAATTAATTTTTATGAGTGGTTTAAGAGCTGATTAGTACTTTTTTTAGTAATTTTATGGCATAATGTTGGAATTTATAAAAATGGCTAGAACTAATTCATGTTACACACACCTGCTTGTCATAGTTCAAATAAA
>TU59814
TACGATGACCGCAAAGGTAGCCGTGATGACCTCAGAGATCGCTACGATGACCGCAAAGGTAGCCGTGATGACCTCAGAGATCGCTACGATGATCGCAGAGGTAGCCGTGATGACCTCAGAGATCGCTACGATGATCGCAGAGGTAGCCGTGATGACCTCAGAGATAGTGTCAAATGATTCTTCTGAGCTGAATGAATCATCCTTTTTTTATTTACTTTTTGTTTTATTTTACAGGATTGTAATAGTATTTTATAAACAGCATATAGTTTTTTGTTGTTGTAATGTCTATCAGCTAAAGTAATTAGGCTACATCACATTTTATTCTTCTGAATCATCTTTTTTTTTTGGGTGGATGTTCAGAATGGTGCTTAACGACGATGACATTTCTCCAATTATTTTGTACATTTCTATATTATTTTAAAAAGCTTTTAACCCTGCATGTTATGTATATGTTAGTTTTTTAAGACAATGAAATAGGCCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_03261739_03262843.mRNA False 1672 mRNA 0.42 2 3261038 3262843
TU59814 True 482 TUCP 0.44 2 3261203 3261957

Neighbor

gene id symbol gene type direction distance location
CI01000009_03244366_03259106 ILDR2 coding downstream 1932 3243598 ~ 3259106 (-)
CI01000009_03235111_03242103 NA coding downstream 18935 3235014 ~ 3242103 (-)
CI01000009_03226613_03234223 ME3.L, ME3 coding downstream 26815 3225768 ~ 3234223 (-)
CI01000009_03171440_03194494 DCAF6 coding downstream 65893 3171440 ~ 3195145 (-)
CI01000009_03140599_03143635 SLC35A5 coding downstream 117403 3140599 ~ 3143635 (-)
CI01000009_03264437_03267242 NA coding upstream 1594 3264437 ~ 3267242 (-)
CI01000009_03292206_03295043 NA coding upstream 29363 3292206 ~ 3295043 (-)
CI01000009_03306370_03311820 NA coding upstream 43446 3306289 ~ 3311820 (-)
CI01000009_03358707_03369503 PPP2R3B coding upstream 95165 3358008 ~ 3369577 (-)
CI01000009_03378591_03380390 NA coding upstream 115716 3378559 ~ 3381365 (-)
G52592 NA non-coding downstream 37239 3223490 ~ 3223799 (-)
G52593 NA non-coding downstream 38077 3222632 ~ 3222961 (-)
G52521 NA non-coding downstream 39096 3220732 ~ 3221942 (-)
G52496 NA non-coding downstream 53612 3202765 ~ 3207426 (-)
G52494 NA non-coding downstream 104892 3150263 ~ 3156146 (-)
G52513 NA non-coding upstream 15901 3278744 ~ 3279333 (-)
G52501 NA non-coding upstream 24475 3287318 ~ 3290823 (-)
G52606 NA non-coding upstream 38106 3300949 ~ 3302661 (-)
G52623 NA non-coding upstream 119141 3381984 ~ 3386060 (-)
G52639 NA non-coding upstream 143820 3406663 ~ 3406876 (-)
CI01000009_02885473_02893975 NA other downstream 361631 2883688 ~ 2893975 (-)
G52410 NA other downstream 698505 2551724 ~ 2562533 (-)
G52098 NA other downstream 1853411 1401932 ~ 1407627 (-)
G52828 NA other upstream 954577 4217420 ~ 4231469 (-)
G53515 NA other upstream 2239552 5502395 ~ 5505248 (-)
G55814 NA other upstream 5162978 8425821 ~ 8428012 (-)
CI01000009_08858198_08860555 NA other upstream 5595309 8856310 ~ 8860563 (-)
G59097 NA other upstream 9025374 12288217 ~ 12289518 (-)

Expression


Co-expression Network