G75689 (LOC103026897,LOC108428397)


Basic Information

Item Value
gene id G75689
gene name LOC103026897,LOC108428397
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 22630194 ~ 22633409 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU102012
GCaatgaaattgtatttattatttctttttttaatttactgacACGTTATGTTGGTGGCACTACACGTGTGATCCAGCAGGGGGGGCTGCTTGCCTTATCAAAGCCAGACTGGAGCATTTATTTTGTTCTAATGTCAGTTCAATCAGATGTTCAATGCTTTCTTAATACATCTTGAAAGACGTGATGCTGATGTCTCCCTTGACACGAATATAACTGATGGTCTCCATCCCCTGTCGGTTGGGGAACTCAATCTCCTGCCCATCAGGTAGCTTCACCTCAAACAGTCTTCCAGTGTGCTTCAGTACAACTTTAAACGTAGAGCCTGGGTGAAAAGGATTGTGGGTGTCTCTTTGCTCCTGGTCCCAGATATTATCACTCCGTGAATTACACACCAGCACTGGAGTTTCACTATCGTCTTCGTAAAAACGGGGGTTGAAGTGAAGCGCCAGTTCACTTGAACTAGATCCCAGATCAATCTGAAACCTTTTGGCATCGGCATTGATCTTCCCTTGGACTTTCAGCTGATCTCCTGCCCTGAGCAGAACATTCTTCATTTCAGCCTCCATTTCTTGATCCTCTGAGGGCTTTGCGAGTGAGCAGAACCTCTTCCACACATCCACAGTAATCCTAATCATTCCT

Function

NR:

description
galectin-2-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU102012 True 640 lncRNA 0.45 4 22630194 22633409

Neighbor

gene id symbol gene type direction distance location
LOC103021604 LOC103021604,LOC108428402 coding upstream 658958 21956572 ~ 21971236 (+)
LOC103022337 yaf2,LOC108428404,LOC103358851 coding upstream 675055 21948555 ~ 21955139 (+)
LOC103047463 prickle1,LOC107726281,LOC107695002,LOC107741965 coding upstream 717899 21865975 ~ 21912295 (+)
LOC103046961 LOC107694983 coding upstream 884230 21644638 ~ 21745964 (+)
LOC103047464 twf1,LOC108428409 coding upstream 1051330 21566368 ~ 21578864 (+)
LOC103027184 LOC108428395,LOC108275251,LOC103155695,LOC105938547,LOC106919346,LOC107706850,LOC103466445,LOC107552424 coding downstream 3751 22637160 ~ 22666809 (+)
rsl24d1 rsl24d1,LOC107694994 coding downstream 187708 22821117 ~ 22824416 (+)
fam96a fam96a,LOC107673635 coding downstream 785257 23418666 ~ 23425305 (+)
saal1 NA coding downstream 1045808 23679217 ~ 23687396 (+)
tph1 tph1,tph1a,LOC107673292,LOC107564603,LOC107670227 coding downstream 1070516 23703925 ~ 23710875 (+)
G75664 NA non-coding upstream 190869 22439030 ~ 22439325 (+)
G75627 NA non-coding upstream 597724 22032159 ~ 22032470 (+)
G75577 NA non-coding upstream 878946 21750926 ~ 21751248 (+)
G75413 kiaa0101 non-coding upstream 1391728 21236592 ~ 21238466 (+)
G75405 NA non-coding upstream 1426171 21199287 ~ 21204023 (+)
G75734 NA non-coding downstream 118126 22751535 ~ 22751999 (+)
G75760 NA non-coding downstream 267869 22901278 ~ 22902077 (+)
G75795 NA non-coding downstream 317271 22950680 ~ 22950899 (+)
G75807 NA non-coding downstream 391866 23025275 ~ 23081671 (+)
G75874 NA non-coding downstream 580994 23214403 ~ 23214749 (+)
mov10l1 NA other upstream 1365418 21250467 ~ 21264776 (+)
G75391 pus7 other upstream 1533288 21088622 ~ 21096906 (+)
G75383 morc2,LOC107754332,LOC107701074,LOC107674835 other upstream 1605066 21023256 ~ 21025128 (+)
LOC103028745 NA other upstream 2422239 20203619 ~ 20207955 (+)
LOC103044129 NA other upstream 3092577 19527212 ~ 19537617 (+)
LOC103028957 rfx7,LOC108428391,LOC108275305,LOC107695007,LOC107563886,LOC100538179,LOC107741823,LOC100694937 other downstream 121564 22754973 ~ 22780959 (+)
LOC103047784 LOC108428360,LOC108274708 other downstream 148326 22781735 ~ 22815522 (+)
G75938 LOC105900730,LOC105912833 other downstream 854121 23487530 ~ 23487870 (+)
G75974 NA other downstream 1282382 23915791 ~ 23917603 (+)
LOC103038709 LOC103038709,LOC108432651 other downstream 1398683 24032092 ~ 24037861 (+)

Expression


Co-expression Network