CI01000009_03264437_03267242


Basic Information

Item Value
gene id CI01000009_03264437_03267242
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 3264437 ~ 3267242 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_03264437_03267242.mRNA
ATGACCAACTGGAAGCTGATTTTTTGCAGTCTATGTTTAATATCAGTGTTGTCGAGTGCTTTTGGGCTGGAAGTGACAATGAGTCAAGCTTCAGTTGAGGTTGCCAGGGGTGATGAAGTCATCCTTACATGTAATTTTAAACCTAAAAATCAAGTAAATGAACTTATCATTGTAACATGGACTGGTGATGCTGATGAGACATCTGGAGACAAGGTACTTTTTGGTAACTATTACTCCAATACTCACAATGTAGACATTGGACCAGACTATGAAGGCAAAATCATGATAGACTTTGACAGTGCTGCAAAAACATCGAAACTGACATTAAAACAAGTCACTCTTAAAGAAAGCAGAAAAATTCGATGTTATGTTCAGATTCCTGGAGACATTGATGGCAGAACATCTGACACTACTTCTCTTTTGGTTCAGGTTGCACCATCACAACCTATTTGTAAGTTAGTGGGCACAGCAGAATACGGAAACAATATTAGCCTAACCTGTGTTTCTGAGGAGGGCTCGCCGATACCAACGTACAAATGGGAGAGATATGATGTCAAAAATGTCCCAAAAGCATTTCCTTCTAAAACCACTGAAAAGGATGGAGTTGTGTCTTTGGTCAATGTATCCGTGGATACATCAGGTTTCTATATTTGCCTGTCAACCAATAAGGTCGGATCAGCCAAATGTAACATGACATTGTCTGTAATGCCAG

Function

NR:

description
Sc:d0144 protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_03264437_03267242.mRNA True 712 mRNA 0.40 5 3264437 3267242

Neighbor

gene id symbol gene type direction distance location
CI01000009_03261739_03262843 NA coding downstream 1594 3261038 ~ 3262843 (-)
CI01000009_03244366_03259106 ILDR2 coding downstream 5331 3243598 ~ 3259106 (-)
CI01000009_03235111_03242103 NA coding downstream 22334 3235014 ~ 3242103 (-)
CI01000009_03226613_03234223 ME3.L, ME3 coding downstream 30214 3225768 ~ 3234223 (-)
CI01000009_03171440_03194494 DCAF6 coding downstream 69292 3171440 ~ 3195145 (-)
CI01000009_03292206_03295043 NA coding upstream 24964 3292206 ~ 3295043 (-)
CI01000009_03306370_03311820 NA coding upstream 39047 3306289 ~ 3311820 (-)
CI01000009_03358707_03369503 PPP2R3B coding upstream 90766 3358008 ~ 3369577 (-)
CI01000009_03378591_03380390 NA coding upstream 111317 3378559 ~ 3381365 (-)
CI01000009_03568782_03574843 NA coding upstream 301413 3568655 ~ 3574843 (-)
G52592 NA non-coding downstream 40638 3223490 ~ 3223799 (-)
G52593 NA non-coding downstream 41476 3222632 ~ 3222961 (-)
G52521 NA non-coding downstream 42495 3220732 ~ 3221942 (-)
G52496 NA non-coding downstream 57011 3202765 ~ 3207426 (-)
G52494 NA non-coding downstream 108291 3150263 ~ 3156146 (-)
G52513 NA non-coding upstream 11502 3278744 ~ 3279333 (-)
G52501 NA non-coding upstream 20076 3287318 ~ 3290823 (-)
G52606 NA non-coding upstream 33707 3300949 ~ 3302661 (-)
G52623 NA non-coding upstream 114742 3381984 ~ 3386060 (-)
G52639 NA non-coding upstream 139421 3406663 ~ 3406876 (-)
CI01000009_02885473_02893975 NA other downstream 365030 2883688 ~ 2893975 (-)
G52410 NA other downstream 701904 2551724 ~ 2562533 (-)
G52098 NA other downstream 1856810 1401932 ~ 1407627 (-)
G52828 NA other upstream 950178 4217420 ~ 4231469 (-)
G53515 NA other upstream 2235153 5502395 ~ 5505248 (-)
G55814 NA other upstream 5158579 8425821 ~ 8428012 (-)
CI01000009_08858198_08860555 NA other upstream 5590910 8856310 ~ 8860563 (-)
G59097 NA other upstream 9020975 12288217 ~ 12289518 (-)

Expression


Co-expression Network