G75807


Basic Information

Item Value
gene id G75807
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 23025275 ~ 23081671 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU102164
gcCTAAATGTACAAAGGCAAGTTacaatattgtataaaaaaaaaagaaatgtggcAATGTACACTTTACATACGACAACCCCaggaagagagtgagggagagagaggcagaggaaGAACAATACAGAGCTCAGAGACGAGGGGGGGAGAGGGAGAGCCAGGTTTACGAGAGAAATGCATCCAAACATAGAAATGAACAAAAGCTGTAAACATCTGTCTTTCAAGTACCAATGAGTGATAGTGAGCCACAGCTCTCAGACTGAGAGGGACAGGACAAAAACACTCAATGTGAGAACGGGAGAGGCCCAAATAGATCAGGAAGTAGAACCTGGGGGGCTGCGGGGGGTACGGGGGGCGGGGGGGTTGGTAAGCACATTGCGTCCTCCCTTCAAGGACTGCATGGGGACCAGCCAGAGTAGCACCGTTTGAGACTAACAATAATGTCTGTAGTtatagaacaaaaaacaaaacaaaaagagtgACTGTGTCTCACTGAGGATAAACActgaaaatgcttaaaaaaaagaaaattagaaacTTAGAACAAGCGCTTTTTTTAAAACTCCTCAATACAGAGGAAACCATGAACCATGTCACCAGACAGCACAACATTACTGATCATATGTTTAAAGAGAAAACAGTTAAGtgatattaattattactactatttattttaaatatctgtCGCCATATTTTATCCAAGATGATTTAATGTTAAATCATCTCCTCATCCACTGGGTTTGATAGAACATTTTacaatgacatgccaaaagtcgtGGGACAGCAGAATGtgaaattgatcatgaagtgctAACTGAGGGCACTTCATGATCAATAACTCAACTTTGGAAGGCCGGAGGAGTTTGAGCAAGGTCTAGTAGTGAATGCCAGATAGATGGaacataaagtttttttaatttagtgcgGGCGTTGATTCCTGGTTACCACCGACAGTTGACAGAACAGTGGATGGTAATAATATTGTGACTGGAGGTGTCGGGCAAGAGCGCTCCGAAGTCAATCCCATTTCCATGATTCCTGTTGTTCTATCAGAGCAACTACCAATGACCTCGATTTATCGATTTATGTTAGTGAAGATCTGGACAATTATGTTATGATTTGATTCATGTTTTCCGTGAAACCGAAGTGTGACATGCTTGGAAAAGAAGTTGTGGGTTTGAGGTTTGAGGGGGAGAAAAGACACCCAAGTAAAGAGAAAAGTGGAGCAAGAGAAGAAGGGGAGGCAGGGAGAGGGGGGGAAATATATCACAACACTTCAATTATAAAGCCGTTACACCAGCTACATATTCATATTATATCAACAATAGTAGAAAAAAAAGGCTAACAgacaaaaaaaggggaaaaaaagagtaggAAATTCCAATAGCATCCAacaacctttttaaaataattcctCTGTACAATATATACAGAAACCACATAGTGAGTGCATGTGGGAGCGAGAGAAGGGCAGCAAAAGAGGAAGTGAGGCAAACGTGCACAGCTTGCCTGACTCTCCGTGTtaatgtttctttcttttttttttttctttttctttctagtGCTATAGTACACCATGCAGATACACATGACAGAGTGGAAGGGAGAGGGAGCCGGGAGGACATCCGGAGATAGGAGGTCCAAAAGTGAACACCGAACAGCACATGTACTCCACTGTCAGGTATACAGTAACTCTACACATCAATGTATTCAGACTGGGATCCGACTACCGTGGTGGGCCACTCTTGGGCCTATGCAAGGGGGGGCACAAAAAAAGTCCCGTCGAGATCTTCTAACCATAGAAACTCTCTTCGTGCTTTTGTATATGCACTTACCCAACGGCTTAAACTCTGATCCATGCAGTTTGGCATGAGACTCTtaatcatcagcagcagcagcagcatgttgAAGAAAAATAGCATGGGCAtgtacgtgtgtatgtgtgtacatttgtgagtgtgtgtgtcacagTTTGTGACCAGGCAACCTCGgacacatacatgcacacactcatacatacatacatacatacatacatatacccCACCTCACACAGACAGGATGACTGTCTCCCTGACTGTCACAGTTACAGAAGCTGAGGCCTGGGAACAGCTCCTCCTGGAGTACACACACCCTTTCAGGCGTTCAGCTTCCCAGCAACGGCTGCTTAGTGGTGTTGGTAGTACTGCCACAAAAAAAggcactactactactactccagTCCAGCCTACAAGcagtacatacatacacacacgtcacacactccacacatcCCTGTCGTCCTTCCTTAGAGAAGTCCTTAGAGAAGTCCTTTGCAGCATGTTTGAGCACCCTTCCAAAGCAGCCTATCATTAGTAGTCCCATTGAAGATCCAAACTACAGGTGCAGGAGAAATGTGTGGAACCCCTCAGTAACGACCACTTGACCGTTACGCTGCTACTTGTGTACGCCAGCCAGTGCAACGTTCCATACGCATGAGCTATGAGCTGTTGATGGAATCACAACAACGAGAGACACAATGAGGTTTGCTCTAGTCTccttcaaagaaaacaaaacaaaaaaaatacaagaaaggCATCCTACCAACATCAGGATGTACGATTACAGGCCGATTGCAGGAAGTTGGAAGTGTGTTTCGAATGCCTTCAACAAAGCATATATTTACTATGAGCTCAAGTAAGTGGatgtaaaatgaactgaaatcgTAACAGGAACTCTAGCTGCTCCCCTGAATCTGAACTaactgagtgagagagagagagtcagagagagaaaaagagagagaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU102164 True 2786 lncRNA 0.43 3 23025275 23081671

Neighbor

gene id symbol gene type direction distance location
rsl24d1 rsl24d1,LOC107694994 coding upstream 200859 22821117 ~ 22824416 (+)
LOC103027184 LOC108428395,LOC108275251,LOC103155695,LOC105938547,LOC106919346,LOC107706850,LOC103466445,LOC107552424 coding upstream 358466 22637160 ~ 22666809 (+)
LOC103021604 LOC103021604,LOC108428402 coding upstream 1054039 21956572 ~ 21971236 (+)
LOC103022337 yaf2,LOC108428404,LOC103358851 coding upstream 1070136 21948555 ~ 21955139 (+)
LOC103047463 prickle1,LOC107726281,LOC107695002,LOC107741965 coding upstream 1112980 21865975 ~ 21912295 (+)
fam96a fam96a,LOC107673635 coding downstream 336995 23418666 ~ 23425305 (+)
saal1 NA coding downstream 597546 23679217 ~ 23687396 (+)
tph1 tph1,tph1a,LOC107673292,LOC107564603,LOC107670227 coding downstream 622254 23703925 ~ 23710875 (+)
sergef NA coding downstream 630859 23712530 ~ 23742791 (+)
LOC103043661 NA coding downstream 650391 23732062 ~ 23736230 (+)
G75795 NA non-coding upstream 74376 22950680 ~ 22950899 (+)
G75760 NA non-coding upstream 123198 22901278 ~ 22902077 (+)
G75734 NA non-coding upstream 273276 22751535 ~ 22751999 (+)
G75689 LOC103026897,LOC108428397 non-coding upstream 391866 22630194 ~ 22633409 (+)
G75664 NA non-coding upstream 585950 22439030 ~ 22439325 (+)
G75874 NA non-coding downstream 132732 23214403 ~ 23214749 (+)
G75881 NA non-coding downstream 184259 23265930 ~ 23266319 (+)
G75882 NA non-coding downstream 192899 23274570 ~ 23275013 (+)
G75889 NA non-coding downstream 211165 23292836 ~ 23293142 (+)
G75957 NA non-coding downstream 700361 23782032 ~ 23782993 (+)
LOC103047784 LOC108428360,LOC108274708 other upstream 209753 22781735 ~ 22815522 (+)
LOC103028957 rfx7,LOC108428391,LOC108275305,LOC107695007,LOC107563886,LOC100538179,LOC107741823,LOC100694937 other upstream 244316 22754973 ~ 22780959 (+)
mov10l1 NA other upstream 1760499 21250467 ~ 21264776 (+)
G75391 pus7 other upstream 1928369 21088622 ~ 21096906 (+)
G75383 morc2,LOC107754332,LOC107701074,LOC107674835 other upstream 2000147 21023256 ~ 21025128 (+)
G75938 LOC105900730,LOC105912833 other downstream 405859 23487530 ~ 23487870 (+)
G75974 NA other downstream 834120 23915791 ~ 23917603 (+)
LOC103038709 LOC103038709,LOC108432651 other downstream 950421 24032092 ~ 24037861 (+)
LOC103035272 LOC108432640,LOC107569703,LOC107720762,LOC107670190,LOC107740887 other downstream 971390 24053061 ~ 24082844 (+)
G76192 NA other downstream 1176838 24258509 ~ 24260506 (+)

Expression


Co-expression Network