G75938 (LOC105900730,LOC105912833)


Basic Information

Item Value
gene id G75938
gene name LOC105900730,LOC105912833
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 23487530 ~ 23487870 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU102309
CtgaggacccactgcagtttgcgtaccgtgaaaaggtgggagtggaagatgccatcctctatcttctgcacagagctcactctcatctggacaaggggggaggtgctgtgagggtcatgttcttcgacttctccagtgccttcaacaccatACAGCCCCTACTGCTGAGAGACaagctgatgaagatggaggtggacatgcacctggtcacctggatcactgactaccttactgggagaccacaacatgtcaggatcagggactgctcctctgacacagtgatcagcagcacaggagcaccacaggggactgttctctctccagtcctgttcacactgtac

Function

NR:

description
PREDICTED: uncharacterized protein LOC105900730

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU102309 True 341 TUCP 0.54 1 23487530 23487870

Neighbor

gene id symbol gene type direction distance location
fam96a fam96a,LOC107673635 coding upstream 62225 23418666 ~ 23425305 (+)
rsl24d1 rsl24d1,LOC107694994 coding upstream 663114 22821117 ~ 22824416 (+)
LOC103027184 LOC108428395,LOC108275251,LOC103155695,LOC105938547,LOC106919346,LOC107706850,LOC103466445,LOC107552424 coding upstream 820721 22637160 ~ 22666809 (+)
LOC103021604 LOC103021604,LOC108428402 coding upstream 1516294 21956572 ~ 21971236 (+)
LOC103022337 yaf2,LOC108428404,LOC103358851 coding upstream 1532391 21948555 ~ 21955139 (+)
saal1 NA coding downstream 191347 23679217 ~ 23687396 (+)
tph1 tph1,tph1a,LOC107673292,LOC107564603,LOC107670227 coding downstream 216055 23703925 ~ 23710875 (+)
sergef NA coding downstream 224660 23712530 ~ 23742791 (+)
LOC103043661 NA coding downstream 244192 23732062 ~ 23736230 (+)
dhtkd1 dhtkd1,LOC107559980,LOC107673284 coding downstream 298395 23786265 ~ 23802931 (+)
G75889 NA non-coding upstream 194388 23292836 ~ 23293142 (+)
G75882 NA non-coding upstream 212517 23274570 ~ 23275013 (+)
G75881 NA non-coding upstream 221211 23265930 ~ 23266319 (+)
G75874 NA non-coding upstream 272781 23214403 ~ 23214749 (+)
G75807 NA non-coding upstream 405859 23025275 ~ 23081671 (+)
G75957 NA non-coding downstream 294162 23782032 ~ 23782993 (+)
G75988 NA non-coding downstream 489195 23977065 ~ 23977422 (+)
G76060 LOC103039440,LOC108432681,LOC105892437,LOC107673304,LOC107740884,LOC107569705,LOC102199411,LOC100711429 non-coding downstream 552504 24040374 ~ 24041616 (+)
G76197 NA non-coding downstream 791624 24279494 ~ 24280790 (+)
G76202 NA non-coding downstream 801522 24289392 ~ 24291726 (+)
LOC103047784 LOC108428360,LOC108274708 other upstream 672008 22781735 ~ 22815522 (+)
LOC103028957 rfx7,LOC108428391,LOC108275305,LOC107695007,LOC107563886,LOC100538179,LOC107741823,LOC100694937 other upstream 706571 22754973 ~ 22780959 (+)
mov10l1 NA other upstream 2222754 21250467 ~ 21264776 (+)
G75391 pus7 other upstream 2390624 21088622 ~ 21096906 (+)
G75383 morc2,LOC107754332,LOC107701074,LOC107674835 other upstream 2462402 21023256 ~ 21025128 (+)
G75974 NA other downstream 427921 23915791 ~ 23917603 (+)
LOC103038709 LOC103038709,LOC108432651 other downstream 544222 24032092 ~ 24037861 (+)
LOC103035272 LOC108432640,LOC107569703,LOC107720762,LOC107670190,LOC107740887 other downstream 565191 24053061 ~ 24082844 (+)
G76192 NA other downstream 770639 24258509 ~ 24260506 (+)
LOC111193110 NA other downstream 1385530 24873400 ~ 24898537 (+)

Expression


Co-expression Network