CI01000009_03292206_03295043


Basic Information

Item Value
gene id CI01000009_03292206_03295043
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 3292206 ~ 3295043 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_03292206_03295043.mRNA
ACGCCTCTATGAGCGACCCGACAAATTGCTATATTTTAGATGTTTTTCTCCTGCTGTATTCTATCATTTTCACTGCTCTCTACTTCCGAGAGAAGTTTACAAAGGAAGAGCCTGTTCCTCCAGAGCCTGCGACCCCGGCCCGTAACCCCAATGAGCCTGTCTATACAAAAACATTCGAGCAATCAGGAGAACGCGGTATCTGTTCGCTAGGGTCTTTTTACCGCCAGGACTTGGATCTGCCTCAGATGAGTTCCGATTATCAGCAACTGGATAGACCGATTCGAAGACGGGAGCCAGAGACACATTATCAGGAACTGAGAGGAGCAAGAAATGATGAATACCAGGAAATAAAACCTAAAGGAAACAAACCTCGCAAAGGCAAGAGCAAACCTGATGAG

Function

NR:

description
hypothetical protein cypCar_00014075

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_03292206_03295043.mRNA True 398 mRNA 0.46 7 3292206 3295043

Neighbor

gene id symbol gene type direction distance location
CI01000009_03264437_03267242 NA coding downstream 24964 3264437 ~ 3267242 (-)
CI01000009_03261739_03262843 NA coding downstream 29363 3261038 ~ 3262843 (-)
CI01000009_03244366_03259106 ILDR2 coding downstream 33100 3243598 ~ 3259106 (-)
CI01000009_03235111_03242103 NA coding downstream 50103 3235014 ~ 3242103 (-)
CI01000009_03226613_03234223 ME3.L, ME3 coding downstream 57983 3225768 ~ 3234223 (-)
CI01000009_03306370_03311820 NA coding upstream 11246 3306289 ~ 3311820 (-)
CI01000009_03358707_03369503 PPP2R3B coding upstream 62965 3358008 ~ 3369577 (-)
CI01000009_03378591_03380390 NA coding upstream 83516 3378559 ~ 3381365 (-)
CI01000009_03568782_03574843 NA coding upstream 273612 3568655 ~ 3574843 (-)
CI01000009_03582190_03582916 NA coding upstream 287147 3582190 ~ 3583445 (-)
G52501 NA non-coding downstream 1383 3287318 ~ 3290823 (-)
G52513 NA non-coding downstream 12873 3278744 ~ 3279333 (-)
G52592 NA non-coding downstream 68407 3223490 ~ 3223799 (-)
G52593 NA non-coding downstream 69245 3222632 ~ 3222961 (-)
G52521 NA non-coding downstream 70264 3220732 ~ 3221942 (-)
G52606 NA non-coding upstream 5906 3300949 ~ 3302661 (-)
G52623 NA non-coding upstream 86941 3381984 ~ 3386060 (-)
G52639 NA non-coding upstream 111620 3406663 ~ 3406876 (-)
G52670 NA non-coding upstream 159300 3454343 ~ 3454550 (-)
G52725 NA non-coding upstream 352671 3647714 ~ 3647979 (-)
CI01000009_02885473_02893975 NA other downstream 392799 2883688 ~ 2893975 (-)
G52410 NA other downstream 729673 2551724 ~ 2562533 (-)
G52098 NA other downstream 1884579 1401932 ~ 1407627 (-)
G52828 NA other upstream 922377 4217420 ~ 4231469 (-)
G53515 NA other upstream 2207352 5502395 ~ 5505248 (-)
G55814 NA other upstream 5130778 8425821 ~ 8428012 (-)
CI01000009_08858198_08860555 NA other upstream 5563109 8856310 ~ 8860563 (-)
G59097 NA other upstream 8993174 12288217 ~ 12289518 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_037997 cd247l coding NC_007120.7 CM002893.2 34356895 ~ 34368842 (-)