G75957


Basic Information

Item Value
gene id G75957
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 23782032 ~ 23782993 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU102336
CTTTGCTTCTCTTCTGGCAAAAAATGTTGGAATCTGGctgGATCTTTTAATGCTGTTGGTGCTACAGATTTTTCAATCCCAGTCACTTTGTTCTCCTAAAGCACCACTGCATTTCCTCCATGCCAGAAACTCTATAGGCTTCTGATCTTTGCCTCAAATGACCAGCGGACCAGTGTTGCTGAAGGTTTTCCAGCCAAGCAGAAGCACAGCTTCTAGACTGACCATGCATGATGACAATACCTGAAGCTGTTCTGTGATTTTGTTCAGAATTGtcttgtttcctgtttcttgaTCAATTGTGGTTTAAGGTGAACTTTATTGAAGACAAGAAATAAACTGTTTTGTATGTGTTGTCTTTTAATGGCTGTGATGTGGGTAAGATTTGCATTTTGTTAACTGGCTGAAACAtggtggggaaaaaaattaaactagac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU102336 True 434 lncRNA 0.40 2 23782032 23782993

Neighbor

gene id symbol gene type direction distance location
sergef NA coding upstream 39241 23712530 ~ 23742791 (+)
LOC103043661 NA coding upstream 45802 23732062 ~ 23736230 (+)
tph1 tph1,tph1a,LOC107673292,LOC107564603,LOC107670227 coding upstream 71157 23703925 ~ 23710875 (+)
saal1 NA coding upstream 94636 23679217 ~ 23687396 (+)
fam96a fam96a,LOC107673635 coding upstream 356727 23418666 ~ 23425305 (+)
dhtkd1 dhtkd1,LOC107559980,LOC107673284 coding downstream 3272 23786265 ~ 23802931 (+)
LOC103041809 camk1d,camk1db,LOC103041809,LOC108275359,LOC107569715,LOC107670218,LOC107740872 coding downstream 21569 23804562 ~ 23827333 (+)
LOC103041200 hal,LOC103041200,LOC108275357,LOC107740873,LOC107670217,LOC107720790,LOC107673290 coding downstream 53325 23836318 ~ 23856218 (+)
nox5 nox5,LOC107720789,LOC107559983,LOC107673291 coding downstream 75476 23858469 ~ 23873790 (+)
LOC103040160 glce,glcea,LOC108274589,LOC107569710,LOC107740877,LOC107670231,LOC107673273,LOC106562601 coding downstream 97192 23880185 ~ 23886241 (+)
G75889 NA non-coding upstream 488890 23292836 ~ 23293142 (+)
G75882 NA non-coding upstream 507019 23274570 ~ 23275013 (+)
G75881 NA non-coding upstream 515713 23265930 ~ 23266319 (+)
G75874 NA non-coding upstream 567283 23214403 ~ 23214749 (+)
G75807 NA non-coding upstream 700361 23025275 ~ 23081671 (+)
G75988 NA non-coding downstream 194072 23977065 ~ 23977422 (+)
G76060 LOC103039440,LOC108432681,LOC105892437,LOC107673304,LOC107740884,LOC107569705,LOC102199411,LOC100711429 non-coding downstream 257381 24040374 ~ 24041616 (+)
G76197 NA non-coding downstream 496501 24279494 ~ 24280790 (+)
G76202 NA non-coding downstream 506399 24289392 ~ 24291726 (+)
G76217 NA non-coding downstream 658092 24441085 ~ 24462559 (+)
G75938 LOC105900730,LOC105912833 other upstream 294162 23487530 ~ 23487870 (+)
LOC103047784 LOC108428360,LOC108274708 other upstream 966510 22781735 ~ 22815522 (+)
LOC103028957 rfx7,LOC108428391,LOC108275305,LOC107695007,LOC107563886,LOC100538179,LOC107741823,LOC100694937 other upstream 1001073 22754973 ~ 22780959 (+)
mov10l1 NA other upstream 2517256 21250467 ~ 21264776 (+)
G75391 pus7 other upstream 2685126 21088622 ~ 21096906 (+)
G75974 NA other downstream 132798 23915791 ~ 23917603 (+)
LOC103038709 LOC103038709,LOC108432651 other downstream 249099 24032092 ~ 24037861 (+)
LOC103035272 LOC108432640,LOC107569703,LOC107720762,LOC107670190,LOC107740887 other downstream 270068 24053061 ~ 24082844 (+)
G76192 NA other downstream 475516 24258509 ~ 24260506 (+)
LOC111193110 NA other downstream 1090407 24873400 ~ 24898537 (+)

Expression


Co-expression Network