G75974


Basic Information

Item Value
gene id G75974
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 23915791 ~ 23917603 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU102363
TTATtgaaaatacacttttcttaTTTATTCACAGACCTGAAGAAGTAATCAGTTAGTGATGCTGAAGTTTTGATTGTACATtgattacaaaactacaaacataGACATGTTTTAAGCATAGATACTTGGTGGGCTACCATAGCAAAGAGTActaaaaaaatttacatttcatttcatgTAAGATGCACAGATGCTGTTCCAGTGGAAGTTTAATCTTGGTTTCTATTGCTGCTGTTCTTCAGAGACATTTTCATAGGGCCAAAGAAAATACGGTGTTGTTTTTGTCCTACACCTTTAGTACACAGTGGTATTGTGTGGTTTCCTACTATTATatgaaaagtaaatataaagtaCAGTTAACCACATTCTACAGAaatttttaaatacaacaatGGAAACAACCACAACTGTaccaacaaaaacacagaataaaatatagatagggttatagatttttttcctcATTGTAGATTAACTTCCACTCAGCAGCACTACACTCACCATACTGAGTGTTAACGAGGGGTTCGTGGGGACGTTCCATTGGGAATTTGGAGGAGGGGGGGGTGGGGAACAGCAATACTtagttttcttttcctttctttcctttctttgcTTTCTCTGCGCCCTTGGGGGTGGGTGTCTTTGGATTGCAGGGTTTGGACACCTTAATGGTGGTCTGACAGTCGGCGTTGAACATGGCTTTCTTCAGAGTTCCAGATCTACTCCGAGTGCCTGTGGACGTGTCGCACTCTGCCCAGCGGCCAAACTTGTACTTGCAATCAGCCCAAAGTCCTTCTTCCAGTTGCACGGCACTTTACACTTGTGCTTCTTGGACTGCTCATTGCAGGTGGCCTCTCGAACCCCCGGCCCACAATCTCCACTGTTGGGCACACATTTCCCAAACACCCACTCGGCGCATTCTGAGTCCGCTTTGCCCTCCTTCTTATTCCCTTTTCTTTATGGCTTCCGCAGCGATTGTCAGAGCAACCAGCAGCAGAATTGTTGTTGAGAATAAAGTCCGCATCCTGTAAACAGCAGTTCCCAACATCATCAGATCAAACACTACAGTTacacaaaaatacagaacaatacatgaatatttatatatatatatatatatatatatatat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU102363 True 1130 TUCP 0.41 3 23915791 23917603

Neighbor

gene id symbol gene type direction distance location
ambra1 LOC108432675,LOC107670191 coding upstream 5270 23887608 ~ 23910521 (+)
LOC103040160 glce,glcea,LOC108274589,LOC107569710,LOC107740877,LOC107670231,LOC107673273,LOC106562601 coding upstream 29550 23880185 ~ 23886241 (+)
nox5 nox5,LOC107720789,LOC107559983,LOC107673291 coding upstream 42001 23858469 ~ 23873790 (+)
LOC103041200 hal,LOC103041200,LOC108275357,LOC107740873,LOC107670217,LOC107720790,LOC107673290 coding upstream 59573 23836318 ~ 23856218 (+)
LOC103041809 camk1d,camk1db,LOC103041809,LOC108275359,LOC107569715,LOC107670218,LOC107740872 coding upstream 88458 23804562 ~ 23827333 (+)
LOC103036608 phf21ab,LOC108432679,LOC107673221,LOC108275277 coding downstream 62208 23979811 ~ 24014346 (+)
prdm11 prdm11,LOC106560765 coding downstream 97872 24015475 ~ 24029643 (+)
bet1l bet1l,LOC107740886,LOC107569707 coding downstream 126543 24044146 ~ 24047074 (+)
LOC103034513 arpp19,LOC107569706,LOC107740885,LOC107720800,LOC107670207,LOC107673248,LOC107559970 coding downstream 130937 24048540 ~ 24050532 (+)
myo5c myo5c coding downstream 166189 24083792 ~ 24107824 (+)
G75957 NA non-coding upstream 132798 23782032 ~ 23782993 (+)
G75889 NA non-coding upstream 622649 23292836 ~ 23293142 (+)
G75882 NA non-coding upstream 640778 23274570 ~ 23275013 (+)
G75881 NA non-coding upstream 649472 23265930 ~ 23266319 (+)
G75874 NA non-coding upstream 701042 23214403 ~ 23214749 (+)
G75988 NA non-coding downstream 59462 23977065 ~ 23977422 (+)
G76060 LOC103039440,LOC108432681,LOC105892437,LOC107673304,LOC107740884,LOC107569705,LOC102199411,LOC100711429 non-coding downstream 122771 24040374 ~ 24041616 (+)
G76197 NA non-coding downstream 361891 24279494 ~ 24280790 (+)
G76202 NA non-coding downstream 371789 24289392 ~ 24291726 (+)
G76217 NA non-coding downstream 523482 24441085 ~ 24462559 (+)
G75938 LOC105900730,LOC105912833 other upstream 427921 23487530 ~ 23487870 (+)
LOC103047784 LOC108428360,LOC108274708 other upstream 1100269 22781735 ~ 22815522 (+)
LOC103028957 rfx7,LOC108428391,LOC108275305,LOC107695007,LOC107563886,LOC100538179,LOC107741823,LOC100694937 other upstream 1134832 22754973 ~ 22780959 (+)
mov10l1 NA other upstream 2651015 21250467 ~ 21264776 (+)
G75391 pus7 other upstream 2818885 21088622 ~ 21096906 (+)
LOC103038709 LOC103038709,LOC108432651 other downstream 114489 24032092 ~ 24037861 (+)
LOC103035272 LOC108432640,LOC107569703,LOC107720762,LOC107670190,LOC107740887 other downstream 135458 24053061 ~ 24082844 (+)
G76192 NA other downstream 340906 24258509 ~ 24260506 (+)
LOC111193110 NA other downstream 955797 24873400 ~ 24898537 (+)
G76358 NA other downstream 1029185 24946788 ~ 24948149 (+)

Expression


Co-expression Network