G76069


Basic Information

Item Value
gene id G76069
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 23986749 ~ 23987527 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU102501
acacacacacacacagttaggCAGGCAGAGGGGGAGAGACTCTCTGAGCCAGTGGAACAGCACAGCATTCAACTGTCGGTTCATTACTGTTTCCACCTGTGAGCTAGCAGTTCTACTACACAATAAGCAGACAGAATCTATTACTGCATCTCATCTCTTTACTCCTGAGtgcacacgaacacacacacacacacacacacacacacacctgacacTAAATTTAGAGACCCAATCCAGACTTGCTGCACCTACCAGGCtagtttattttactgcatcACACACTTCCCCCCAAAAAACTGCAGCCAGTACAATTGGCAACGGATGTCCAAATGACAAGAGCTGTTGGTAAACTCAGAGCTGGTCCTGGAGCAATCATGGCACTGACACAGCAAATCCTGACATGgactttaaatatgttaaatgtgGTACTAAATGCTGCatacatatatcatataaagtatagtatagtttacttcagacaaaaataatttaacactggacactttatttatctttatgcTATAATGTAACCCACTCATGATACTAAAATATGTAATGACCTTAACTCTGACCTTTTCTGATTTGTATTCAGCAATAGCaacaacagtgtcacatgtCTCTACTATTAGATCCATAAATTCAGGCTACAAGTACAGGAAATTATGCAAACTCCACACAAACATCTGGCTGAAATATGTCTTACTTAATCTGTCCTATTATACATCACATTacctattattttatttataat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU102501 True 751 lncRNA 0.39 2 23986749 23987527

Neighbor

gene id symbol gene type direction distance location
LOC103036104 LOC108432677,LOC108274966 coding downstream 12414 23925268 ~ 23974335 (-)
LOC103039841 mdkb,LOC103039841,LOC108432678,LOC107569721 coding downstream 64527 23915791 ~ 23922222 (-)
kcnc1 kcnc1,kcnc1b,LOC107673294,LOC107559979,LOC107569720,LOC107750713 coding downstream 214080 23747948 ~ 23772669 (-)
spg11 spg11 coding downstream 568604 23370623 ~ 23418145 (-)
LOC103035716 znf609,LOC108275264,LOC107695009,LOC107756519 coding downstream 840219 23025246 ~ 23146530 (-)
LOC103039440 LOC103039440,LOC108432681,LOC108275367,LOC105892437,LOC107569705,LOC107670205,LOC107673304,LOC107559992 coding upstream 49730 24037257 ~ 24043153 (-)
LOC103033668 LOC108432685 coding upstream 162898 24150425 ~ 24156021 (-)
LOC103025218 NA coding upstream 169612 24157139 ~ 24180647 (-)
LOC111193112 NA coding upstream 197042 24184569 ~ 24188202 (-)
pgghg pgghg coding upstream 275220 24262747 ~ 24274199 (-)
G76042 NA non-coding downstream 76244 23900642 ~ 23910505 (-)
G76040 ambra1,LOC108432675,LOC107740878,LOC107559958,LOC107569709,LOC107720791 non-coding downstream 90538 23895354 ~ 23896211 (-)
G76035 glce,glcea,LOC108274589,LOC107569710,LOC107740877,LOC107670231,LOC107673273 non-coding downstream 100577 23881814 ~ 23886172 (-)
G76015 NA non-coding downstream 126321 23801545 ~ 23860428 (-)
LOC111193113 NA non-coding upstream 7883 23995410 ~ 23999176 (-)
LOC103037768 NA non-coding upstream 22443 24009970 ~ 24016230 (-)
G76086 prdm11 non-coding upstream 35602 24023129 ~ 24029595 (-)
G76080 arpp19,LOC107569706,LOC107740885,LOC107720800,LOC107670207,LOC107673248 non-coding upstream 61049 24048576 ~ 24050518 (-)
G76104 LOC108432640 non-coding upstream 83171 24070698 ~ 24071676 (-)
LOC103042310 ucmab,ucma,LOC107720768,LOC107569716,LOC107673257,LOC108275358,LOC107559968 other downstream 153681 23827214 ~ 23833068 (-)
LOC103033738 LOC103033738,LOC108444230,LOC106560753,LOC105008418,LOC108274439,LOC107549618,LOC107686877 other downstream 620533 23324577 ~ 23366216 (-)
LOC103024007 LOC108428399 other downstream 1412736 22442736 ~ 22574013 (-)
LOC111193105 LOC102794092,LOC108274651,LOC107571202,LOC108428364 other downstream 2713732 21269504 ~ 21273017 (-)
gatd1 pddc1,LOC102788149 other downstream 2915503 21065319 ~ 21071246 (-)
deaf1 deaf1,LOC107726848 other upstream 253371 24240898 ~ 24260530 (-)
LOC103025724 tmem80 other upstream 803665 24791192 ~ 24798616 (-)
G76377 NA other upstream 926771 24914298 ~ 24920365 (-)
G76424 NA other upstream 1196682 25184209 ~ 25184469 (-)
rab3il1 rab3il1,LOC108429468,LOC107549590 other upstream 1295262 25282789 ~ 25301768 (-)

Expression


Co-expression Network