G76192


Basic Information

Item Value
gene id G76192
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 24258509 ~ 24260506 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU102670
CTGGGGTCAAGGGTGAAGGGGTGGCTTTTAGGCCAGTGGCATCCACTATACTGCCATCAGTGTGCACAACAATCAGAGTGGCCTTCTGAGTGCTAAGACTGTCTCCAATCTGCAGAGTCGTGCGACCCGTCTGCAACACCACACCACAGCAGggaaacataaacacaacaaaacttCTTACTTAATTTGTATAAaatcaatgtattttatttgtcaAACGCAGTGATTGAAGTTCTGGACTTTTaacaacaaaacagaaacaCTCCAGCAGTAAAGCAAATCAGATATGTGTGTTTATCGGCCATCTACCATTATCTGATTCTGTAGAAAGACACTGGGAGAGCAGTGCTCTGTCTGAGCAAACATACtgcattaaaaatgagaaaataaagcatttacacATGTAGAGATTGTATTTCACTGTTCATTTGTTTTCACAGGTATCAACAAACACATACCCTGgttataaaaaacaacaacgcTGATTTACACCTGAGGAGTTAACATAATCTTCACTCTGAGTCAATTCCTCCAAACTGAAAGTGTTTCACATTTTATCTACAAAAACCTAGAACACTTACGAGCACATGGTCAGGGATGGACGTTGCTGTGGCGACAGATGTTGAGAAAACATTGTCATCTGCAGTCTGGACACCACCGACTGTGACTGTTGTCACTTCTTTACTTCACTATGAGTCGCTCCGGCTCCAAACACCGACCTGCAAACGCCGTCTCGGCCTCGTCTGGGTTCGGCAGGGACTCGGCTATGTCGATGTTCGCCGCTTCCCCCATTACAGTCATCGTGGGCACTTCGGCCTCCGATTCGGTCTCCGATTCCGCCCCCTCCTTCCCCGCCGCTTCGGCTGAGCCGAGCTGCTGCTTCGCCGCCTCGCTTTCGTCCATCAGCGCTGCTGCCCGACTGGAGCCGAATAAGGCCGAAAGATCCCGGCCGCGGAGCCGCCTCCAACCCGCGGTGAAATACTACACCAGCGGCCTGTACAGGGCTTATTAAACTCATAAACCGACCAGAACCGGTAGAGTCCGCTCTCCTTTCAGCAGGGTCATTTACCAAGAccagtaaaacacacacacagggggcCGGTGTTccgtcgagttatgctacccatcaatatgtgcttctttacgtcACTGCGCATGCGCAAACCAa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU102670 True 1168 TUCP 0.49 2 24258509 24260506

Neighbor

gene id symbol gene type direction distance location
drd4 drd4,drd4a,LOC107726856,LOC107551439,LOC107674856,LOC107561186,LOC107655149 coding upstream 32795 24211986 ~ 24225714 (+)
ap4e1 ap4e1,LOC107571341 coding upstream 126475 24120508 ~ 24132034 (+)
LOC103032917 gnb5,LOC108432683,LOC105018176,LOC106584742 coding upstream 141215 24109205 ~ 24117294 (+)
myo5c myo5c coding upstream 150685 24083792 ~ 24107824 (+)
LOC103034513 arpp19,LOC107569706,LOC107740885,LOC107720800,LOC107670207,LOC107673248,LOC107559970 coding upstream 207977 24048540 ~ 24050532 (+)
LOC103029535 pidd1 coding downstream 82237 24342743 ~ 24359175 (+)
LOC103029007 si:dkey-201c1.2,slc25a22,LOC107561181,LOC107732297,LOC107551436 coding downstream 100908 24361414 ~ 24401725 (+)
LOC103028282 syt7,LOC108432693,LOC107754343,LOC107551433,LOC107655153 coding downstream 165623 24426129 ~ 24647549 (+)
fads2 fads2 coding downstream 464638 24725144 ~ 24740083 (+)
myrf myrf coding downstream 541496 24802002 ~ 24860926 (+)
G76060 LOC103039440,LOC108432681,LOC105892437,LOC107673304,LOC107740884,LOC107569705,LOC102199411,LOC100711429 non-coding upstream 216893 24040374 ~ 24041616 (+)
G75988 NA non-coding upstream 281087 23977065 ~ 23977422 (+)
G75957 NA non-coding upstream 475516 23782032 ~ 23782993 (+)
G75889 NA non-coding upstream 965367 23292836 ~ 23293142 (+)
G75882 NA non-coding upstream 983496 23274570 ~ 23275013 (+)
G76197 NA non-coding downstream 18988 24279494 ~ 24280790 (+)
G76202 NA non-coding downstream 28886 24289392 ~ 24291726 (+)
G76217 NA non-coding downstream 180579 24441085 ~ 24462559 (+)
G76219 NA non-coding downstream 193705 24454211 ~ 24456691 (+)
G76225 NA non-coding downstream 267125 24527631 ~ 24563160 (+)
LOC103035272 LOC108432640,LOC107569703,LOC107720762,LOC107670190,LOC107740887 other upstream 175665 24053061 ~ 24082844 (+)
LOC103038709 LOC103038709,LOC108432651 other upstream 220648 24032092 ~ 24037861 (+)
G75974 NA other upstream 340906 23915791 ~ 23917603 (+)
G75938 LOC105900730,LOC105912833 other upstream 770639 23487530 ~ 23487870 (+)
LOC103047784 LOC108428360,LOC108274708 other upstream 1442987 22781735 ~ 22815522 (+)
LOC111193110 NA other downstream 612894 24873400 ~ 24898537 (+)
G76358 NA other downstream 686282 24946788 ~ 24948149 (+)
LOC103022391 parvb,LOC108432702 other downstream 714435 24974941 ~ 24983714 (+)
LOC103022708 NA other downstream 727890 24988396 ~ 25004515 (+)
G76423 NA other downstream 923579 25184085 ~ 25184732 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) AMCG00007290 NA coding CM030123.1 CM030123.1 10161452 ~ 10186176 (-)